RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 CRKLP46109 303 aaKnown RBP24.98■■□□□ 1.59
SKIDA1-204ENST00000633225 TSPYL6Q8N831 410 aa24.98■■□□□ 1.59
SKIDA1-204ENST00000633225 TRMT2AQ8IZ69 625 aaKnown RBP24.97■■□□□ 1.59
SKIDA1-204ENST00000633225 MYH16Q9H6N6 1097 aa24.97■■□□□ 1.59
SKIDA1-204ENST00000633225 INTS5Q6P9B9 1019 aaKnown RBP24.96■■□□□ 1.59
SKIDA1-204ENST00000633225 QSER1Q2KHR3 1735 aa24.96■■□□□ 1.59
SKIDA1-204ENST00000633225 DUSP27Q5VZP5 1158 aa24.96■■□□□ 1.59
SKIDA1-204ENST00000633225 TEX13AQ9BXU3 409 aaPredicted RBP24.96■■□□□ 1.59
SKIDA1-204ENST00000633225 ZBTB1Q9Y2K1 713 aa24.96■■□□□ 1.59
SKIDA1-204ENST00000633225 SLC15A2Q16348 729 aa24.95■■□□□ 1.58
SKIDA1-204ENST00000633225 RC3H1Q5TC82 1133 aaKnown RBP24.95■■□□□ 1.58
SKIDA1-204ENST00000633225 SMIM5Q71RC9 77 aa24.95■■□□□ 1.58
SKIDA1-204ENST00000633225 ELL2O00472 640 aaPredicted RBP24.94■■□□□ 1.58
SKIDA1-204ENST00000633225 EXOSC9Q06265 439 aaKnown RBP24.94■■□□□ 1.58
SKIDA1-204ENST00000633225 YTHDC1Q96MU7 727 aaKnown RBP24.94■■□□□ 1.58
SKIDA1-204ENST00000633225 STARD3NLO95772 234 aa24.93■■□□□ 1.58
SKIDA1-204ENST00000633225 A1BGP04217 495 aa24.93■■□□□ 1.58
SKIDA1-204ENST00000633225 HOXB7P09629 217 aa24.93■■□□□ 1.58
SKIDA1-204ENST00000633225 CCDC87Q9NVE4 849 aa24.93■■□□□ 1.58
SKIDA1-204ENST00000633225 STK32BQ9NY57 414 aa24.93■■□□□ 1.58
SKIDA1-204ENST00000633225 GNPATO15228 680 aa24.92■■□□□ 1.58
SKIDA1-204ENST00000633225 PIP4K2AP48426 406 aaPredicted RBP24.92■■□□□ 1.58
SKIDA1-204ENST00000633225 AK7Q96M32 723 aa24.92■■□□□ 1.58
SKIDA1-204ENST00000633225 NBPF14Q5TI25 921 aa24.91■■□□□ 1.58
SKIDA1-204ENST00000633225 NBPF26B4DH59 902 aa24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 EIF2S2P20042 333 aaKnown RBP24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 NBPF10Q6P3W6 841 aaKnown RBP24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 NBPF15Q8N660 670 aa24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 C4AP0C0L4 1744 aa24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 SOS1Q07889 1333 aaPredicted RBP24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 PNPLA7Q6ZV29 1317 aa24.9■■□□□ 1.58
SKIDA1-204ENST00000633225 HMGB2P26583 209 aaKnown RBP24.89■■□□□ 1.58
SKIDA1-204ENST00000633225 TWISTNBQ3B726 338 aaPredicted RBP24.89■■□□□ 1.58
SKIDA1-204ENST00000633225 NECTIN2Q92692 538 aa24.89■■□□□ 1.58
SKIDA1-204ENST00000633225 TFCP2L1Q9NZI6 479 aa24.89■■□□□ 1.58
SKIDA1-204ENST00000633225 CASZ1Q86V15 1759 aa24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 RPS6KA4O75676 772 aa24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 CANXP27824 592 aaKnown RBP24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 R3HDM1Q15032 1099 aaKnown RBP24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 PDIA6Q15084 440 aa24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 HDGFL1Q5TGJ6 251 aa24.88■■□□□ 1.57
SKIDA1-204ENST00000633225 VAMP4O75379 141 aa24.87■■□□□ 1.57
SKIDA1-204ENST00000633225 PROSER3Q2NL68 480 aa24.87■■□□□ 1.57
SKIDA1-204ENST00000633225 PDGFDQ9GZP0 370 aaPredicted RBP24.87■■□□□ 1.57
SKIDA1-204ENST00000633225 PSDA5PKW4 1024 aaPredicted RBP24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 PHF14O94880 888 aa24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 SSFA2P28290 1259 aa24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 LRP10Q7Z4F1 713 aa24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 RTCBQ9Y3I0 505 aaKnown RBP24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 COL15A1P39059 1388 aa24.86■■□□□ 1.57
SKIDA1-204ENST00000633225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.85■■□□□ 1.57
SKIDA1-204ENST00000633225 EIF5P55010 431 aaKnown RBP24.85■■□□□ 1.57
SKIDA1-204ENST00000633225 ERBB4Q15303 1308 aa24.85■■□□□ 1.57
SKIDA1-204ENST00000633225 ANXA1P04083 346 aa24.84■■□□□ 1.57
SKIDA1-204ENST00000633225 COL23A1Q86Y22 540 aaPredicted RBP24.84■■□□□ 1.57
SKIDA1-204ENST00000633225 CHPF2Q9P2E5 772 aa24.84■■□□□ 1.57
SKIDA1-204ENST00000633225 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
SKIDA1-204ENST00000633225 ARHGEF1Q92888 912 aaKnown RBP24.82■■□□□ 1.56
SKIDA1-204ENST00000633225 TCERG1O14776 1098 aaKnown RBP24.81■■□□□ 1.56
SKIDA1-204ENST00000633225 MYL6BP14649 208 aa24.81■■□□□ 1.56
SKIDA1-204ENST00000633225 ADRA2BP18089 450 aa24.81■■□□□ 1.56
SKIDA1-204ENST00000633225 DDX21Q9NR30 783 aaKnown RBP eCLIP24.81■■□□□ 1.56
SKIDA1-204ENST00000633225 ZNF330Q9Y3S2 320 aaPredicted RBP24.8■■□□□ 1.56
SKIDA1-204ENST00000633225 SCN7AQ01118 1682 aa24.8■■□□□ 1.56
SKIDA1-204ENST00000633225 BCORQ6W2J9 1755 aa24.79■■□□□ 1.56
SKIDA1-204ENST00000633225 TRAPPC3LQ5T215 181 aa24.79■■□□□ 1.56
SKIDA1-204ENST00000633225 CCDC30Q5VVM6 783 aa24.79■■□□□ 1.56
SKIDA1-204ENST00000633225 DBF4Q9UBU7 674 aaPredicted RBP24.78■■□□□ 1.56
SKIDA1-204ENST00000633225 FLAD1Q8NFF5 587 aa24.77■■□□□ 1.56
SKIDA1-204ENST00000633225 SRP68Q9UHB9 627 aaKnown RBP24.77■■□□□ 1.56
SKIDA1-204ENST00000633225 USP42Q9H9J4 1324 aaKnown RBP24.76■■□□□ 1.55
SKIDA1-204ENST00000633225 TTLL7Q6ZT98 887 aa24.76■■□□□ 1.55
SKIDA1-204ENST00000633225 TBC1D2BQ9UPU7 963 aa24.76■■□□□ 1.55
SKIDA1-204ENST00000633225 MSH5O43196 834 aa24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 CT47B1P0C2W7 299 aaPredicted RBP24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 RFC4P35249 363 aa24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 DZIP3Q86Y13 1208 aaKnown RBP24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 NARFQ9UHQ1 456 aa24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 CACNA1FO60840 1977 aa24.74■■□□□ 1.55
SKIDA1-204ENST00000633225 CAMTA2O94983 1202 aa24.73■■□□□ 1.55
SKIDA1-204ENST00000633225 XAGE3Q8WTP9 111 aa24.73■■□□□ 1.55
SKIDA1-204ENST00000633225 BCL2L12Q9HB09 334 aa24.73■■□□□ 1.55
SKIDA1-204ENST00000633225 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
SKIDA1-204ENST00000633225 A0A087WZG4 1122 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 USPL1Q5W0Q7 1092 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 COPS6Q7L5N1 327 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 G2E3Q7L622 706 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 STK31Q9BXU1 1019 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 CHMP4AQ9BY43 222 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 HYPKQ9NX55 129 aa24.72■■□□□ 1.55
SKIDA1-204ENST00000633225 SLC4A2P04920 1241 aa24.71■■□□□ 1.55
SKIDA1-204ENST00000633225 GYS1P13807 737 aa24.71■■□□□ 1.55
SKIDA1-204ENST00000633225 SSH1Q8WYL5 1049 aa24.71■■□□□ 1.55
SKIDA1-204ENST00000633225 ZBTB7AO95365 584 aa24.7■■□□□ 1.55
SKIDA1-204ENST00000633225 AIMP1Q12904 312 aaKnown RBP24.7■■□□□ 1.55
SKIDA1-204ENST00000633225 ZNF428Q96B54 188 aa24.7■■□□□ 1.55
SKIDA1-204ENST00000633225 BCL2L13Q9BXK5 485 aa24.7■■□□□ 1.55
SKIDA1-204ENST00000633225 MSL1Q68DK7 614 aa24.7■■□□□ 1.54
SKIDA1-204ENST00000633225 ARXQ96QS3 562 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms