RNA–Protein interactions for RNA: ENST00000631832.1

LINC01002-208, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 622 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-208	ENST00000631832	VSIG10	Q8N0Z9	540 aa		13.97	□□□□□ -0.17
LINC01002-208	ENST00000631832	MTFR1L	Q9H019	292 aa		13.97	□□□□□ -0.17
LINC01002-208	ENST00000631832	ZBTB1	Q9Y2K1	713 aa		13.97	□□□□□ -0.17
LINC01002-208	ENST00000631832	USP16	Q9Y5T5	823 aa		13.97	□□□□□ -0.17
LINC01002-208	ENST00000631832	STARD3NL	O95772	234 aa		13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	SNRPA1	P09661	255 aa	Known RBP	13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	SSFA2	P28290	1259 aa		13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	EIF4A1	P60842	406 aa	Known RBP	13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	FLAD1	Q8NFF5	587 aa		13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	ARHGEF1	Q92888	912 aa	Known RBP	13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	ARX	Q96QS3	562 aa		13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	LRP5	O75197	1615 aa		13.96	□□□□□ -0.17
LINC01002-208	ENST00000631832	CCER2	I3L3R5	266 aa		13.95	□□□□□ -0.18
LINC01002-208	ENST00000631832	RFC4	P35249	363 aa		13.95	□□□□□ -0.18
LINC01002-208	ENST00000631832	KRT24	Q2M2I5	525 aa		13.95	□□□□□ -0.18
LINC01002-208	ENST00000631832	SRP68	Q9UHB9	627 aa	Known RBP	13.95	□□□□□ -0.18
LINC01002-208	ENST00000631832	C4A	P0C0L4	1744 aa		13.95	□□□□□ -0.18
LINC01002-208	ENST00000631832	PTGER2	P43116	358 aa		13.94	□□□□□ -0.18
LINC01002-208	ENST00000631832	KLHL34	Q8N239	644 aa		13.94	□□□□□ -0.18
LINC01002-208	ENST00000631832	NECTIN2	Q92692	538 aa		13.94	□□□□□ -0.18
LINC01002-208	ENST00000631832	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.94	□□□□□ -0.18
LINC01002-208	ENST00000631832	CHL1	O00533	1208 aa		13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	EIF2S2	P20042	333 aa	Known RBP	13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	WWC1	Q8IX03	1113 aa		13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	SLC16A10	Q8TF71	515 aa		13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	MBIP	Q9NS73	344 aa		13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	SRCAP	Q6ZRS2	3230 aa		13.93	□□□□□ -0.18
LINC01002-208	ENST00000631832	SOS1	Q07889	1333 aa	Predicted RBP	13.92	□□□□□ -0.18
LINC01002-208	ENST00000631832	LAMB4	A4D0S4	1761 aa		13.92	□□□□□ -0.18
LINC01002-208	ENST00000631832	GIGYF1	O75420	1035 aa	Predicted RBP	13.92	□□□□□ -0.18
LINC01002-208	ENST00000631832	NGEF	Q8N5V2	710 aa		13.92	□□□□□ -0.18
LINC01002-208	ENST00000631832	COL15A1	P39059	1388 aa		13.92	□□□□□ -0.18
LINC01002-208	ENST00000631832	POLD1	P28340	1107 aa		13.91	□□□□□ -0.18
LINC01002-208	ENST00000631832	TSR2	Q969E8	191 aa	Known RBP	13.91	□□□□□ -0.18
LINC01002-208	ENST00000631832	CFAP44	Q96MT7	982 aa		13.91	□□□□□ -0.18
LINC01002-208	ENST00000631832	TBC1D2B	Q9UPU7	963 aa		13.91	□□□□□ -0.18
LINC01002-208	ENST00000631832	ELL2	O00472	640 aa	Predicted RBP	13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	ZPR1	O75312	459 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	MYL6B	P14649	208 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	ADRA2B	P18089	450 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	GNAI1	P63096	354 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	CALD1	Q05682	793 aa	Known RBP	13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	USPL1	Q5W0Q7	1092 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	NPM2	Q86SE8	214 aa	Known RBP	13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	SGIP1	Q9BQI5	828 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	IFT57	Q9NWB7	429 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	BABAM1	Q9NWV8	329 aa		13.9	□□□□□ -0.18
LINC01002-208	ENST00000631832	NBPF26	B4DH59	902 aa		13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	ZNF853	P0CG23	659 aa		13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	GYS1	P13807	737 aa		13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	EIF5	P55010	431 aa	Known RBP	13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	CCDC27	Q2M243	656 aa		13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	NBPF10	Q6P3W6	841 aa	Known RBP	13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	NBPF15	Q8N660	670 aa		13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	USP42	Q9H9J4	1324 aa	Known RBP	13.89	□□□□□ -0.19
LINC01002-208	ENST00000631832	ANXA1	P04083	346 aa		13.88	□□□□□ -0.19
LINC01002-208	ENST00000631832	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
LINC01002-208	ENST00000631832	COL24A1	Q17RW2	1714 aa		13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	MMP10	P09238	476 aa		13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	IL6ST	P40189	918 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	DUSP27	Q5VZP5	1158 aa		13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	BICDL1	Q6ZP65	573 aa		13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832	NARF	Q9UHQ1	456 aa		13.87	□□□□□ -0.19
LINC01002-208	ENST00000631832		A0A087WZG4	1122 aa		13.86	□□□□□ -0.19
LINC01002-208	ENST00000631832	PROSER3	Q2NL68	480 aa		13.86	□□□□□ -0.19
LINC01002-208	ENST00000631832	DZIP3	Q86Y13	1208 aa	Known RBP	13.86	□□□□□ -0.19
LINC01002-208	ENST00000631832	C8orf58	Q8NAV2	365 aa		13.86	□□□□□ -0.19
LINC01002-208	ENST00000631832	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC01002-208	ENST00000631832	NLGN1	Q8N2Q7	840 aa		13.85	□□□□□ -0.19
LINC01002-208	ENST00000631832	TSPYL6	Q8N831	410 aa		13.85	□□□□□ -0.19
LINC01002-208	ENST00000631832	BCL2L12	Q9HB09	334 aa		13.85	□□□□□ -0.19
LINC01002-208	ENST00000631832	HDGFL1	Q5TGJ6	251 aa		13.84	□□□□□ -0.19
LINC01002-208	ENST00000631832	TTLL7	Q6ZT98	887 aa		13.84	□□□□□ -0.19
LINC01002-208	ENST00000631832	WDR63	Q8IWG1	891 aa		13.84	□□□□□ -0.19
LINC01002-208	ENST00000631832	CHPF2	Q9P2E5	772 aa		13.84	□□□□□ -0.19
LINC01002-208	ENST00000631832	SCN7A	Q01118	1682 aa		13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	TCERG1	O14776	1098 aa	Known RBP	13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	AIMP1	Q12904	312 aa	Known RBP	13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	SYT17	Q9BSW7	474 aa		13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	PARP3	Q9Y6F1	533 aa		13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	IL16	Q14005	1332 aa		13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	FANCI	Q9NVI1	1328 aa		13.83	□□□□□ -0.2
LINC01002-208	ENST00000631832	BCOR	Q6W2J9	1755 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	CAMTA2	O94983	1202 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	DDR1	Q08345	913 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	NFIX	Q14938	502 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	PDIA6	Q15084	440 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	NCBP3	Q53F19	620 aa	Known RBP	13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	TBC1D9B	Q66K14	1250 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	NLGN2	Q8NFZ4	835 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	ZBTB3	Q9H5J0	574 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	WWC3	Q9ULE0	1092 aa		13.82	□□□□□ -0.2
LINC01002-208	ENST00000631832	FAM177B	A6PVY3	158 aa		13.81	□□□□□ -0.2
LINC01002-208	ENST00000631832	EXOSC9	Q06265	439 aa	Known RBP	13.81	□□□□□ -0.2
LINC01002-208	ENST00000631832	HLF	Q16534	295 aa		13.81	□□□□□ -0.2
LINC01002-208	ENST00000631832	KIF6	Q6ZMV9	814 aa		13.81	□□□□□ -0.2
LINC01002-208	ENST00000631832	POLRMT	O00411	1230 aa	Known RBP	13.8	□□□□□ -0.2
LINC01002-208	ENST00000631832	TM4SF1	P30408	202 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms