RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 CFAP99D6REC4 459 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 KIF3BO15066 747 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 LRRN4Q8WUT4 740 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 MSH6P52701 1360 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 PRDM15P57071 1507 aaPredicted RBP10.52□□□□□ -0.73
SMN2-214ENST00000626847 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
SMN2-214ENST00000626847 PRR7Q8TB68 274 aa10.51□□□□□ -0.73
SMN2-214ENST00000626847 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
SMN2-214ENST00000626847 PPP4R2Q9NY27 417 aa10.51□□□□□ -0.73
SMN2-214ENST00000626847 NCOA2Q15596 1464 aa10.51□□□□□ -0.73
SMN2-214ENST00000626847 LRRIQ1Q96JM4 1722 aa10.51□□□□□ -0.73
SMN2-214ENST00000626847 EP400Q96L91 3159 aa10.51□□□□□ -0.73
SMN2-214ENST00000626847 SENP3-EIF4A1A0A087X0R7 540 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 EGFL6Q8IUX8 553 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 CWC22Q9HCG8 908 aaKnown RBP10.5□□□□□ -0.73
SMN2-214ENST00000626847 SLIT1O75093 1534 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 UBR1Q8IWV7 1749 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 NBPF9Q3BBW0 867 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 HSP90AB4PQ58FF6 505 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
SMN2-214ENST00000626847 AHDC1Q5TGY3 1603 aaPredicted RBP10.49□□□□□ -0.73
SMN2-214ENST00000626847 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
SMN2-214ENST00000626847 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
SMN2-214ENST00000626847 TK2O00142 265 aa10.49□□□□□ -0.73
SMN2-214ENST00000626847 IRF5Q13568 498 aa10.49□□□□□ -0.73
SMN2-214ENST00000626847 Q3C1V9 767 aa10.49□□□□□ -0.73
SMN2-214ENST00000626847 CCDC125Q86Z20 511 aa10.49□□□□□ -0.73
SMN2-214ENST00000626847 RBM28Q9NW13 759 aaKnown RBP10.49□□□□□ -0.73
SMN2-214ENST00000626847 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.49□□□□□ -0.73
SMN2-214ENST00000626847 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
SMN2-214ENST00000626847 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
SMN2-214ENST00000626847 ZNF526Q8TF50 670 aaPredicted RBP10.48□□□□□ -0.73
SMN2-214ENST00000626847 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
SMN2-214ENST00000626847 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
SMN2-214ENST00000626847 BSDC1Q9NW68 430 aaPredicted RBP10.48□□□□□ -0.73
SMN2-214ENST00000626847 DIP2AQ14689 1571 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 ABCC3O15438 1527 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 NKTRP30414 1462 aaKnown RBP10.47□□□□□ -0.73
SMN2-214ENST00000626847 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 PPP1R15AO75807 674 aaPredicted RBP10.47□□□□□ -0.73
SMN2-214ENST00000626847 YY1P25490 414 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
SMN2-214ENST00000626847 VAC14Q08AM6 782 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 RETREG3Q86VR2 466 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMN2-214ENST00000626847 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 SLC52A1Q9NWF4 448 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 RAI14Q9P0K7 980 aa10.47□□□□□ -0.73
SMN2-214ENST00000626847 EID1Q9Y6B2 187 aa10.46□□□□□ -0.74
SMN2-214ENST00000626847 RTEL1-TNFRSF6BF6WH68 1400 aa10.46□□□□□ -0.74
SMN2-214ENST00000626847 NWD1Q149M9 1564 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 A0A0G2JS52 829 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SMN2-214ENST00000626847 MORN1Q5T089 497 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 EPS8L1Q8TE68 723 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
SMN2-214ENST00000626847 NRDCO43847 1150 aa10.44□□□□□ -0.74
SMN2-214ENST00000626847 ITGAEP38570 1179 aa10.44□□□□□ -0.74
SMN2-214ENST00000626847 NR6A1Q15406 480 aa10.44□□□□□ -0.74
SMN2-214ENST00000626847 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
SMN2-214ENST00000626847 FRAT1Q92837 279 aaPredicted RBP10.44□□□□□ -0.74
SMN2-214ENST00000626847 SLC26A8Q96RN1 970 aa10.44□□□□□ -0.74
SMN2-214ENST00000626847 CFDP1Q9UEE9 299 aaPredicted RBP10.44□□□□□ -0.74
SMN2-214ENST00000626847 KDM5AP29375 1690 aaKnown RBP10.44□□□□□ -0.74
SMN2-214ENST00000626847 ARHGAP35Q9NRY4 1499 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 ADGRD1Q6QNK2 874 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 RETREG2Q8NC44 543 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 ANKK1Q8NFD2 765 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 TRAIPQ9BWF2 469 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 SH3BP1Q9Y3L3 701 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 NHSL1Q5SYE7 1610 aa10.43□□□□□ -0.74
SMN2-214ENST00000626847 RFX1P22670 979 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 PPP4CP60510 307 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 EFCC1Q9HA90 598 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 TMEM2Q9UHN6 1383 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 TET3O43151 1660 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 EEA1Q15075 1411 aa10.42□□□□□ -0.74
SMN2-214ENST00000626847 VGLL3A8MV65 326 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
SMN2-214ENST00000626847 OTUD6BQ8N6M0 293 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 ZHX1Q9UKY1 873 aaPredicted RBP10.41□□□□□ -0.74
SMN2-214ENST00000626847 CCDC18Q5T9S5 1454 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
SMN2-214ENST00000626847 SATB1Q01826 763 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 SETDB1Q15047 1291 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 DESI1Q6ICB0 168 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 ADAMTS19Q8TE59 1207 aa10.41□□□□□ -0.74
SMN2-214ENST00000626847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMN2-214ENST00000626847 SETD5Q9C0A6 1442 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms