RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 COL24A1Q17RW2 1714 aa22■■□□□ 1.11
UBE3D-208ENST00000626828 UBR2Q8IWV8 1755 aa22■■□□□ 1.11
UBE3D-208ENST00000626828 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
UBE3D-208ENST00000626828 SNRPA1P09661 255 aaKnown RBP22■■□□□ 1.11
UBE3D-208ENST00000626828 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
UBE3D-208ENST00000626828 TJP1Q07157 1748 aa22■■□□□ 1.11
UBE3D-208ENST00000626828 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
UBE3D-208ENST00000626828 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
UBE3D-208ENST00000626828 BABAM1Q9NWV8 329 aa21.98■■□□□ 1.11
UBE3D-208ENST00000626828 ZBTB1Q9Y2K1 713 aa21.98■■□□□ 1.11
UBE3D-208ENST00000626828 USP16Q9Y5T5 823 aa21.98■■□□□ 1.11
UBE3D-208ENST00000626828 DCAF8L1A6NGE4 600 aa21.97■■□□□ 1.11
UBE3D-208ENST00000626828 SOS1Q07889 1333 aaPredicted RBP21.97■■□□□ 1.11
UBE3D-208ENST00000626828 ZPR1O75312 459 aa21.96■■□□□ 1.11
UBE3D-208ENST00000626828 GYS1P13807 737 aa21.96■■□□□ 1.11
UBE3D-208ENST00000626828 A0A087WZG4 1122 aa21.95■■□□□ 1.1
UBE3D-208ENST00000626828 APAF1O14727 1248 aa21.95■■□□□ 1.1
UBE3D-208ENST00000626828 EIF5P55010 431 aaKnown RBP21.95■■□□□ 1.1
UBE3D-208ENST00000626828 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
UBE3D-208ENST00000626828 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
UBE3D-208ENST00000626828 A1BGP04217 495 aa21.94■■□□□ 1.1
UBE3D-208ENST00000626828 EIF4A1P60842 406 aaKnown RBP21.94■■□□□ 1.1
UBE3D-208ENST00000626828 KLHL34Q8N239 644 aa21.94■■□□□ 1.1
UBE3D-208ENST00000626828 NARFQ9UHQ1 456 aa21.94■■□□□ 1.1
UBE3D-208ENST00000626828 MMP10P09238 476 aa21.93■■□□□ 1.1
UBE3D-208ENST00000626828 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
UBE3D-208ENST00000626828 USP42Q9H9J4 1324 aaKnown RBP21.93■■□□□ 1.1
UBE3D-208ENST00000626828 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
UBE3D-208ENST00000626828 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
UBE3D-208ENST00000626828 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
UBE3D-208ENST00000626828 PRAMEF22A3QJZ6 481 aa21.91■■□□□ 1.1
UBE3D-208ENST00000626828 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
UBE3D-208ENST00000626828 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
UBE3D-208ENST00000626828 COL15A1P39059 1388 aa21.9■■□□□ 1.1
UBE3D-208ENST00000626828 CHL1O00533 1208 aa21.9■■□□□ 1.1
UBE3D-208ENST00000626828 PARP3Q9Y6F1 533 aa21.9■■□□□ 1.1
UBE3D-208ENST00000626828 FKBP8Q14318 412 aa21.89■■□□□ 1.09
UBE3D-208ENST00000626828 ZNF330Q9Y3S2 320 aaPredicted RBP21.89■■□□□ 1.09
UBE3D-208ENST00000626828 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
UBE3D-208ENST00000626828 TM4SF1P30408 202 aa21.87■■□□□ 1.09
UBE3D-208ENST00000626828 CALD1Q05682 793 aaKnown RBP21.87■■□□□ 1.09
UBE3D-208ENST00000626828 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
UBE3D-208ENST00000626828 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
UBE3D-208ENST00000626828 KDM3BQ7LBC6 1761 aa21.86■■□□□ 1.09
UBE3D-208ENST00000626828 C4AP0C0L4 1744 aa21.85■■□□□ 1.09
UBE3D-208ENST00000626828 NBPF26B4DH59 902 aa21.84■■□□□ 1.09
UBE3D-208ENST00000626828 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
UBE3D-208ENST00000626828 NBPF10Q6P3W6 841 aaKnown RBP21.84■■□□□ 1.09
UBE3D-208ENST00000626828 NBPF15Q8N660 670 aa21.84■■□□□ 1.09
UBE3D-208ENST00000626828 NLGN2Q8NFZ4 835 aa21.84■■□□□ 1.09
UBE3D-208ENST00000626828 BCL2L12Q9HB09 334 aa21.84■■□□□ 1.09
UBE3D-208ENST00000626828 PIP4K2AP48426 406 aaPredicted RBP21.83■■□□□ 1.09
UBE3D-208ENST00000626828 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.09
UBE3D-208ENST00000626828 GNAI1P63096 354 aa21.82■■□□□ 1.08
UBE3D-208ENST00000626828 GPR162Q16538 588 aa21.82■■□□□ 1.08
UBE3D-208ENST00000626828 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
UBE3D-208ENST00000626828 FAM9BQ8IZU0 186 aa21.82■■□□□ 1.08
UBE3D-208ENST00000626828 ZNF853P0CG23 659 aa21.81■■□□□ 1.08
UBE3D-208ENST00000626828 NFIXQ14938 502 aa21.81■■□□□ 1.08
UBE3D-208ENST00000626828 POLRMTO00411 1230 aaKnown RBP21.8■■□□□ 1.08
UBE3D-208ENST00000626828 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 EIF2S2P20042 333 aaKnown RBP21.8■■□□□ 1.08
UBE3D-208ENST00000626828 TGFB2P61812 414 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 DDR1Q08345 913 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 ERBB4Q15303 1308 aa21.8■■□□□ 1.08
UBE3D-208ENST00000626828 RGL2O15211 777 aa21.78■■□□□ 1.08
UBE3D-208ENST00000626828 SERPINB2P05120 415 aa21.78■■□□□ 1.08
UBE3D-208ENST00000626828 TBC1D9BQ66K14 1250 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 BICDL1Q6ZP65 573 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 WWC1Q8IX03 1113 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
UBE3D-208ENST00000626828 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 SETDB2Q96T68 719 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 MBIPQ9NS73 344 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
UBE3D-208ENST00000626828 MYL6BP14649 208 aa21.76■■□□□ 1.07
UBE3D-208ENST00000626828 HOXB7P09629 217 aa21.75■■□□□ 1.07
UBE3D-208ENST00000626828 SENP3-EIF4A1A0A087X0R7 540 aa21.74■■□□□ 1.07
UBE3D-208ENST00000626828 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
UBE3D-208ENST00000626828 GRIN3BO60391 1043 aa21.74■■□□□ 1.07
UBE3D-208ENST00000626828 KRT24Q2M2I5 525 aa21.74■■□□□ 1.07
UBE3D-208ENST00000626828 A0A0G2JLW4 131 aa21.73■■□□□ 1.07
UBE3D-208ENST00000626828 CCER2I3L3R5 266 aa21.73■■□□□ 1.07
UBE3D-208ENST00000626828 PDIA6Q15084 440 aa21.73■■□□□ 1.07
UBE3D-208ENST00000626828 DUSP27Q5VZP5 1158 aa21.73■■□□□ 1.07
UBE3D-208ENST00000626828 LAMB4A4D0S4 1761 aa21.73■■□□□ 1.07
UBE3D-208ENST00000626828 KIF6Q6ZMV9 814 aa21.72■■□□□ 1.07
UBE3D-208ENST00000626828 CHMP4AQ9BY43 222 aa21.72■■□□□ 1.07
UBE3D-208ENST00000626828 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
UBE3D-208ENST00000626828 IL16Q14005 1332 aa21.72■■□□□ 1.07
UBE3D-208ENST00000626828 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
UBE3D-208ENST00000626828 DPEP1P16444 411 aa21.71■■□□□ 1.07
UBE3D-208ENST00000626828 WDR63Q8IWG1 891 aa21.71■■□□□ 1.07
UBE3D-208ENST00000626828 NECTIN2Q92692 538 aa21.71■■□□□ 1.07
UBE3D-208ENST00000626828 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
UBE3D-208ENST00000626828 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
UBE3D-208ENST00000626828 HLFQ16534 295 aa21.7■■□□□ 1.06
UBE3D-208ENST00000626828 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms