RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
CHD2-206ENST00000625990 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
CHD2-206ENST00000625990 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
CHD2-206ENST00000625990 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
CHD2-206ENST00000625990 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
CHD2-206ENST00000625990 MAP3K13O43283 966 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 MMP10P09238 476 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 SSFA2P28290 1259 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
CHD2-206ENST00000625990 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
CHD2-206ENST00000625990 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.49
CHD2-206ENST00000625990 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
CHD2-206ENST00000625990 C4AP0C0L4 1744 aa12.01□□□□□ -0.49
CHD2-206ENST00000625990 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
CHD2-206ENST00000625990 EVX2Q03828 476 aa12.01□□□□□ -0.49
CHD2-206ENST00000625990 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
CHD2-206ENST00000625990 PCDHB13Q9Y5F0 798 aa12.01□□□□□ -0.49
CHD2-206ENST00000625990 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
CHD2-206ENST00000625990 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
CHD2-206ENST00000625990 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
CHD2-206ENST00000625990 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
CHD2-206ENST00000625990 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CHD2-206ENST00000625990 KCPQ6ZWJ8 1503 aa12□□□□□ -0.49
CHD2-206ENST00000625990 GYS1P13807 737 aa11.99□□□□□ -0.49
CHD2-206ENST00000625990 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
CHD2-206ENST00000625990 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
CHD2-206ENST00000625990 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
CHD2-206ENST00000625990 VIRMAQ69YN4 1812 aaKnown RBP11.99□□□□□ -0.49
CHD2-206ENST00000625990 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
CHD2-206ENST00000625990 KIAA1551Q9HCM1 1747 aa11.98□□□□□ -0.49
CHD2-206ENST00000625990 MRC1P22897 1456 aa11.98□□□□□ -0.49
CHD2-206ENST00000625990 A0A0G2JLW4 131 aa11.98□□□□□ -0.49
CHD2-206ENST00000625990 KCNQ3O43525 872 aa11.98□□□□□ -0.49
CHD2-206ENST00000625990 INTS5Q6P9B9 1019 aaKnown RBP11.98□□□□□ -0.49
CHD2-206ENST00000625990 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
CHD2-206ENST00000625990 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
CHD2-206ENST00000625990 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 CNTNAP4Q9C0A0 1308 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 DDR1Q08345 913 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 CD2APQ9Y5K6 639 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 ADAMTS7Q9UKP4 1686 aa11.97□□□□□ -0.49
CHD2-206ENST00000625990 CHD4Q14839 1912 aa11.96□□□□□ -0.49
CHD2-206ENST00000625990 PRKAR2BP31323 418 aa11.96□□□□□ -0.49
CHD2-206ENST00000625990 RFC4P35249 363 aa11.96□□□□□ -0.49
CHD2-206ENST00000625990 PIP4K2AP48426 406 aaPredicted RBP11.96□□□□□ -0.49
CHD2-206ENST00000625990 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
CHD2-206ENST00000625990 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
CHD2-206ENST00000625990 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
CHD2-206ENST00000625990 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
CHD2-206ENST00000625990 USP42Q9H9J4 1324 aaKnown RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 CYP19A1P11511 503 aaPredicted RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 DPEP1P16444 411 aa11.94□□□□□ -0.5
CHD2-206ENST00000625990 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 MCM10Q7L590 875 aa11.94□□□□□ -0.5
CHD2-206ENST00000625990 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
CHD2-206ENST00000625990 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
CHD2-206ENST00000625990 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
CHD2-206ENST00000625990 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
CHD2-206ENST00000625990 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
CHD2-206ENST00000625990 CHRNA5P30532 468 aa11.93□□□□□ -0.5
CHD2-206ENST00000625990 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHD2-206ENST00000625990 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
CHD2-206ENST00000625990 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
CHD2-206ENST00000625990 CCDC87Q9NVE4 849 aa11.93□□□□□ -0.5
CHD2-206ENST00000625990 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
CHD2-206ENST00000625990 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
CHD2-206ENST00000625990 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
CHD2-206ENST00000625990 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
CHD2-206ENST00000625990 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
CHD2-206ENST00000625990 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
CHD2-206ENST00000625990 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
CHD2-206ENST00000625990 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 KCNA3P22001 575 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
CHD2-206ENST00000625990 COL15A1P39059 1388 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 CARMIL3Q8ND23 1372 aa11.91□□□□□ -0.5
CHD2-206ENST00000625990 POLRMTO00411 1230 aaKnown RBP11.9□□□□□ -0.5
CHD2-206ENST00000625990 STK25O00506 426 aa11.9□□□□□ -0.5
CHD2-206ENST00000625990 GRIN3BO60391 1043 aa11.9□□□□□ -0.5
CHD2-206ENST00000625990 NLGN1Q8N2Q7 840 aa11.9□□□□□ -0.5
CHD2-206ENST00000625990 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
CHD2-206ENST00000625990 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
CHD2-206ENST00000625990 A1BGP04217 495 aa11.89□□□□□ -0.51
CHD2-206ENST00000625990 TEFQ10587 303 aa11.89□□□□□ -0.51
CHD2-206ENST00000625990 NFIXQ14938 502 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms