RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
NELFE-214ENST00000625905 SOS1Q07889 1333 aaPredicted RBP12.08□□□□□ -0.48
NELFE-214ENST00000625905 COL15A1P39059 1388 aa12.07□□□□□ -0.48
NELFE-214ENST00000625905 PTGER2P43116 358 aa12.07□□□□□ -0.48
NELFE-214ENST00000625905 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
NELFE-214ENST00000625905 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
NELFE-214ENST00000625905 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
NELFE-214ENST00000625905 SNRPA1P09661 255 aaKnown RBP12.06□□□□□ -0.48
NELFE-214ENST00000625905 RFC4P35249 363 aa12.06□□□□□ -0.48
NELFE-214ENST00000625905 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
NELFE-214ENST00000625905 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
NELFE-214ENST00000625905 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
NELFE-214ENST00000625905 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
NELFE-214ENST00000625905 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
NELFE-214ENST00000625905 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
NELFE-214ENST00000625905 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
NELFE-214ENST00000625905 BABAM1Q9NWV8 329 aa12.05□□□□□ -0.48
NELFE-214ENST00000625905 LAS1LQ9Y4W2 734 aaKnown RBP12.05□□□□□ -0.48
NELFE-214ENST00000625905 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
NELFE-214ENST00000625905 EIF4A1P60842 406 aaKnown RBP12.04□□□□□ -0.48
NELFE-214ENST00000625905 ARXQ96QS3 562 aa12.04□□□□□ -0.48
NELFE-214ENST00000625905 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
NELFE-214ENST00000625905 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
NELFE-214ENST00000625905 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
NELFE-214ENST00000625905 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
NELFE-214ENST00000625905 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
NELFE-214ENST00000625905 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
NELFE-214ENST00000625905 A0A087WZG4 1122 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 CHL1O00533 1208 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
NELFE-214ENST00000625905 A1BGP04217 495 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
NELFE-214ENST00000625905 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
NELFE-214ENST00000625905 ZPR1O75312 459 aa12.01□□□□□ -0.49
NELFE-214ENST00000625905 GYS1P13807 737 aa12.01□□□□□ -0.49
NELFE-214ENST00000625905 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
NELFE-214ENST00000625905 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
NELFE-214ENST00000625905 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
NELFE-214ENST00000625905 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
NELFE-214ENST00000625905 FHDC1Q9C0D6 1143 aaPredicted RBP12.01□□□□□ -0.49
NELFE-214ENST00000625905 MMP10P09238 476 aa12□□□□□ -0.49
NELFE-214ENST00000625905 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
NELFE-214ENST00000625905 GNAI1P63096 354 aa12□□□□□ -0.49
NELFE-214ENST00000625905 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
NELFE-214ENST00000625905 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
NELFE-214ENST00000625905 MBIPQ9NS73 344 aa12□□□□□ -0.49
NELFE-214ENST00000625905 NARFQ9UHQ1 456 aa12□□□□□ -0.49
NELFE-214ENST00000625905 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
NELFE-214ENST00000625905 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
NELFE-214ENST00000625905 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
NELFE-214ENST00000625905 NBPF26B4DH59 902 aa11.98□□□□□ -0.49
NELFE-214ENST00000625905 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
NELFE-214ENST00000625905 FKBP8Q14318 412 aa11.98□□□□□ -0.49
NELFE-214ENST00000625905 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
NELFE-214ENST00000625905 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
NELFE-214ENST00000625905 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
NELFE-214ENST00000625905 NBPF15Q8N660 670 aa11.98□□□□□ -0.49
NELFE-214ENST00000625905 C10orf71Q711Q0 1435 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 IL16Q14005 1332 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 HOXB7P09629 217 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 EIF2S2P20042 333 aaKnown RBP11.97□□□□□ -0.49
NELFE-214ENST00000625905 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 SYT17Q9BSW7 474 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
NELFE-214ENST00000625905 MYL6BP14649 208 aa11.96□□□□□ -0.49
NELFE-214ENST00000625905 HDGFL1Q5TGJ6 251 aa11.96□□□□□ -0.49
NELFE-214ENST00000625905 MIER1Q8N108 512 aa11.96□□□□□ -0.49
NELFE-214ENST00000625905 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
NELFE-214ENST00000625905 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
NELFE-214ENST00000625905 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 DDR1Q08345 913 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 NFIXQ14938 502 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 DUSP27Q5VZP5 1158 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 CD2APQ9Y5K6 639 aa11.95□□□□□ -0.5
NELFE-214ENST00000625905 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
NELFE-214ENST00000625905 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 NLGN2Q8NFZ4 835 aa11.94□□□□□ -0.5
NELFE-214ENST00000625905 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
NELFE-214ENST00000625905 RGL2O15211 777 aa11.93□□□□□ -0.5
NELFE-214ENST00000625905 PROSER3Q2NL68 480 aa11.93□□□□□ -0.5
NELFE-214ENST00000625905 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
NELFE-214ENST00000625905 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
NELFE-214ENST00000625905 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
NELFE-214ENST00000625905 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
NELFE-214ENST00000625905 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
NELFE-214ENST00000625905 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
NELFE-214ENST00000625905 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 294.1 ms