RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
ERCC6-212ENST00000623788 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
ERCC6-212ENST00000623788 HINFPQ9BQA5 517 aa7.81□□□□□ -1.16
ERCC6-212ENST00000623788 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
ERCC6-212ENST00000623788 SERTAD1Q9UHV2 236 aa7.81□□□□□ -1.16
ERCC6-212ENST00000623788 GDF11O95390 407 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 ARID4AP29374 1257 aaPredicted RBP7.8□□□□□ -1.16
ERCC6-212ENST00000623788 RNF144AP50876 292 aaPredicted RBP7.8□□□□□ -1.16
ERCC6-212ENST00000623788 HIRAP54198 1017 aaPredicted RBP7.8□□□□□ -1.16
ERCC6-212ENST00000623788 RELBQ01201 579 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 CENPCQ03188 943 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 FKBP5Q13451 457 aaPredicted RBP7.8□□□□□ -1.16
ERCC6-212ENST00000623788 TLR1Q15399 786 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 NBPF15Q8N660 670 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
ERCC6-212ENST00000623788 PPARGC1BQ86YN6 1023 aaKnown RBP7.79□□□□□ -1.16
ERCC6-212ENST00000623788 SLC9A9Q8IVB4 645 aa7.79□□□□□ -1.16
ERCC6-212ENST00000623788 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
ERCC6-212ENST00000623788 USP3Q9Y6I4 520 aa7.79□□□□□ -1.16
ERCC6-212ENST00000623788 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
ERCC6-212ENST00000623788 ATAD2Q6PL18 1390 aa7.79□□□□□ -1.16
ERCC6-212ENST00000623788 PTCD1O75127 700 aaKnown RBP7.78□□□□□ -1.16
ERCC6-212ENST00000623788 PSMA6P60900 246 aaKnown RBP7.78□□□□□ -1.16
ERCC6-212ENST00000623788 RASSF7Q02833 373 aa7.78□□□□□ -1.16
ERCC6-212ENST00000623788 FOXD4L5Q5VV16 416 aaPredicted RBP7.78□□□□□ -1.16
ERCC6-212ENST00000623788 CCER1Q8TC90 406 aaPredicted RBP7.78□□□□□ -1.16
ERCC6-212ENST00000623788 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
ERCC6-212ENST00000623788 C2orf49Q9BVC5 232 aaPredicted RBP7.78□□□□□ -1.16
ERCC6-212ENST00000623788 SPATA31C2B4DYI2 1134 aa7.77□□□□□ -1.17
ERCC6-212ENST00000623788 MEN1O00255 615 aa7.77□□□□□ -1.17
ERCC6-212ENST00000623788 TEAD4Q15561 434 aa7.77□□□□□ -1.17
ERCC6-212ENST00000623788 SCG3Q8WXD2 468 aaKnown RBP7.77□□□□□ -1.17
ERCC6-212ENST00000623788 ZNF395Q9H8N7 513 aaPredicted RBP7.77□□□□□ -1.17
ERCC6-212ENST00000623788 EGFL7Q9UHF1 273 aa7.77□□□□□ -1.17
ERCC6-212ENST00000623788 LGR5O75473 907 aa7.76□□□□□ -1.17
ERCC6-212ENST00000623788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.76□□□□□ -1.17
ERCC6-212ENST00000623788 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
ERCC6-212ENST00000623788 INSM2Q96T92 566 aaPredicted RBP7.76□□□□□ -1.17
ERCC6-212ENST00000623788 SOS2Q07890 1332 aaPredicted RBP7.76□□□□□ -1.17
ERCC6-212ENST00000623788 EML1O00423 815 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 PPP1R12BO60237 982 aaPredicted RBP7.75□□□□□ -1.17
ERCC6-212ENST00000623788 GSK3AP49840 483 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 RHBDD1Q8TEB9 315 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 ZDHHC1Q8WTX9 485 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 ADAMTS8Q9UP79 889 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
ERCC6-212ENST00000623788 SCNN1AP37088 669 aa7.74□□□□□ -1.17
ERCC6-212ENST00000623788 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
ERCC6-212ENST00000623788 WDR44Q5JSH3 913 aa7.74□□□□□ -1.17
ERCC6-212ENST00000623788 SND1Q7KZF4 910 aaKnown RBP eCLIP7.74□□□□□ -1.17
ERCC6-212ENST00000623788 MYO19Q96H55 970 aa7.74□□□□□ -1.17
ERCC6-212ENST00000623788 CNTNAP3BQ96NU0 1288 aa7.74□□□□□ -1.17
ERCC6-212ENST00000623788 CNTNAP3Q9BZ76 1288 aa7.74□□□□□ -1.17
ERCC6-212ENST00000623788 TBCELQ5QJ74 424 aa7.73□□□□□ -1.17
ERCC6-212ENST00000623788 PODXL2Q9NZ53 605 aa7.73□□□□□ -1.17
ERCC6-212ENST00000623788 DNMT3LQ9UJW3 386 aa7.73□□□□□ -1.17
ERCC6-212ENST00000623788 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 IGHA1P01876 353 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 NOS2P35228 1153 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 SERPINB4P48594 390 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 CAPN12Q6ZSI9 719 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
ERCC6-212ENST00000623788 GZF1Q9H116 711 aaPredicted RBP7.72□□□□□ -1.17
ERCC6-212ENST00000623788 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
ERCC6-212ENST00000623788 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
ERCC6-212ENST00000623788 NPR3P17342 541 aa7.71□□□□□ -1.18
ERCC6-212ENST00000623788 C4orf17Q53FE4 359 aa7.71□□□□□ -1.18
ERCC6-212ENST00000623788 SVOPQ8N4V2 548 aa7.71□□□□□ -1.18
ERCC6-212ENST00000623788 HELQQ8TDG4 1101 aa7.71□□□□□ -1.18
ERCC6-212ENST00000623788 QTRT2Q9H974 415 aaKnown RBP7.71□□□□□ -1.18
ERCC6-212ENST00000623788 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
ERCC6-212ENST00000623788 ICMTO60725 284 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 PTSQ03393 145 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 GNASQ5JWF2 1037 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 C1orf53Q5VUE5 145 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 GPR161Q8N6U8 529 aaKnown RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 GTF3C2Q8WUA4 911 aaPredicted RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 NANOS1Q8WY41 292 aaKnown RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 MKNK1Q9BUB5 465 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 ZDHHC3Q9NYG2 299 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
ERCC6-212ENST00000623788 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
ERCC6-212ENST00000623788 GTF2E1P29083 439 aaPredicted RBP7.69□□□□□ -1.18
ERCC6-212ENST00000623788 MARSP56192 900 aaKnown RBP7.69□□□□□ -1.18
ERCC6-212ENST00000623788 ECM1Q16610 540 aa7.69□□□□□ -1.18
ERCC6-212ENST00000623788 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
ERCC6-212ENST00000623788 C16orf46Q6P387 395 aa7.69□□□□□ -1.18
ERCC6-212ENST00000623788 NBPF10Q6P3W6 841 aaKnown RBP7.69□□□□□ -1.18
ERCC6-212ENST00000623788 CHMP7Q8WUX9 453 aaPredicted RBP7.69□□□□□ -1.18
ERCC6-212ENST00000623788 C7orf43Q8WVR3 580 aa7.69□□□□□ -1.18
ERCC6-212ENST00000623788 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
ERCC6-212ENST00000623788 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
ERCC6-212ENST00000623788 GPC6Q9Y625 555 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms