RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
COL8A1-208ENST00000621757 POLD1P28340 1107 aa15.84■□□□□ 0.13
COL8A1-208ENST00000621757 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
COL8A1-208ENST00000621757 ARXQ96QS3 562 aa15.84■□□□□ 0.13
COL8A1-208ENST00000621757 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
COL8A1-208ENST00000621757 ZBTB1Q9Y2K1 713 aa15.84■□□□□ 0.13
COL8A1-208ENST00000621757 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
COL8A1-208ENST00000621757 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
COL8A1-208ENST00000621757 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
COL8A1-208ENST00000621757 TRIM35Q9UPQ4 493 aa15.82■□□□□ 0.12
COL8A1-208ENST00000621757 COL15A1P39059 1388 aa15.82■□□□□ 0.12
COL8A1-208ENST00000621757 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
COL8A1-208ENST00000621757 STARD3NLO95772 234 aa15.81■□□□□ 0.12
COL8A1-208ENST00000621757 RFC4P35249 363 aa15.81■□□□□ 0.12
COL8A1-208ENST00000621757 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
COL8A1-208ENST00000621757 USP42Q9H9J4 1324 aaKnown RBP15.8■□□□□ 0.12
COL8A1-208ENST00000621757 APAF1O14727 1248 aa15.8■□□□□ 0.12
COL8A1-208ENST00000621757 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
COL8A1-208ENST00000621757 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
COL8A1-208ENST00000621757 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
COL8A1-208ENST00000621757 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
COL8A1-208ENST00000621757 SRP68Q9UHB9 627 aaKnown RBP15.79■□□□□ 0.12
COL8A1-208ENST00000621757 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
COL8A1-208ENST00000621757 GYS1P13807 737 aa15.78■□□□□ 0.12
COL8A1-208ENST00000621757 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
COL8A1-208ENST00000621757 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
COL8A1-208ENST00000621757 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
COL8A1-208ENST00000621757 A1BGP04217 495 aa15.77■□□□□ 0.12
COL8A1-208ENST00000621757 BCORQ6W2J9 1755 aa15.77■□□□□ 0.11
COL8A1-208ENST00000621757 UTRNP46939 3433 aa15.76■□□□□ 0.11
COL8A1-208ENST00000621757 MMP10P09238 476 aa15.76■□□□□ 0.11
COL8A1-208ENST00000621757 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
COL8A1-208ENST00000621757 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
COL8A1-208ENST00000621757 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
COL8A1-208ENST00000621757 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
COL8A1-208ENST00000621757 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
COL8A1-208ENST00000621757 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
COL8A1-208ENST00000621757 NLGN1Q8N2Q7 840 aa15.75■□□□□ 0.11
COL8A1-208ENST00000621757 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
COL8A1-208ENST00000621757 ZPR1O75312 459 aa15.74■□□□□ 0.11
COL8A1-208ENST00000621757 IL6STP40189 918 aaPredicted RBP15.74■□□□□ 0.11
COL8A1-208ENST00000621757 FKBP8Q14318 412 aa15.74■□□□□ 0.11
COL8A1-208ENST00000621757 NARFQ9UHQ1 456 aa15.74■□□□□ 0.11
COL8A1-208ENST00000621757 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
COL8A1-208ENST00000621757 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
COL8A1-208ENST00000621757 CHL1O00533 1208 aa15.73■□□□□ 0.11
COL8A1-208ENST00000621757 NLGN2Q8NFZ4 835 aa15.73■□□□□ 0.11
COL8A1-208ENST00000621757 A0A087WZG4 1122 aa15.72■□□□□ 0.11
COL8A1-208ENST00000621757 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
COL8A1-208ENST00000621757 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
COL8A1-208ENST00000621757 FAM9BQ8IZU0 186 aa15.72■□□□□ 0.11
COL8A1-208ENST00000621757 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
COL8A1-208ENST00000621757 BCL2L12Q9HB09 334 aa15.72■□□□□ 0.11
COL8A1-208ENST00000621757 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.11
COL8A1-208ENST00000621757 DDR1Q08345 913 aa15.71■□□□□ 0.11
COL8A1-208ENST00000621757 GPR162Q16538 588 aa15.71■□□□□ 0.11
COL8A1-208ENST00000621757 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
COL8A1-208ENST00000621757 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.11
COL8A1-208ENST00000621757 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.1
COL8A1-208ENST00000621757 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
COL8A1-208ENST00000621757 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
COL8A1-208ENST00000621757 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
COL8A1-208ENST00000621757 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
COL8A1-208ENST00000621757 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
COL8A1-208ENST00000621757 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
COL8A1-208ENST00000621757 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
COL8A1-208ENST00000621757 AFDNP55196 1824 aaKnown RBP15.7■□□□□ 0.1
COL8A1-208ENST00000621757 NRXN2Q9P2S2 1712 aa15.69■□□□□ 0.1
COL8A1-208ENST00000621757 CAMTA2O94983 1202 aa15.69■□□□□ 0.1
COL8A1-208ENST00000621757 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
COL8A1-208ENST00000621757 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
COL8A1-208ENST00000621757 DZIP3Q86Y13 1208 aaKnown RBP15.69■□□□□ 0.1
COL8A1-208ENST00000621757 POLRMTO00411 1230 aaKnown RBP15.68■□□□□ 0.1
COL8A1-208ENST00000621757 NFIXQ14938 502 aa15.68■□□□□ 0.1
COL8A1-208ENST00000621757 WWC1Q8IX03 1113 aa15.68■□□□□ 0.1
COL8A1-208ENST00000621757 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
COL8A1-208ENST00000621757 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
COL8A1-208ENST00000621757 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
COL8A1-208ENST00000621757 TM4SF1P30408 202 aa15.67■□□□□ 0.1
COL8A1-208ENST00000621757 GNAI1P63096 354 aa15.67■□□□□ 0.1
COL8A1-208ENST00000621757 N4BP2Q86UW6 1770 aaPredicted RBP15.67■□□□□ 0.1
COL8A1-208ENST00000621757 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
COL8A1-208ENST00000621757 MYL6BP14649 208 aa15.66■□□□□ 0.1
COL8A1-208ENST00000621757 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
COL8A1-208ENST00000621757 TBC1D9BQ66K14 1250 aa15.66■□□□□ 0.1
COL8A1-208ENST00000621757 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
COL8A1-208ENST00000621757 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
COL8A1-208ENST00000621757 DIEXFQ68CQ4 756 aaKnown RBP15.65■□□□□ 0.1
COL8A1-208ENST00000621757 NGEFQ8N5V2 710 aa15.65■□□□□ 0.1
COL8A1-208ENST00000621757 NECTIN2Q92692 538 aa15.65■□□□□ 0.1
COL8A1-208ENST00000621757 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
COL8A1-208ENST00000621757 GOLGB1Q14789 3259 aaKnown RBP15.65■□□□□ 0.1
COL8A1-208ENST00000621757 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
COL8A1-208ENST00000621757 HOXB7P09629 217 aa15.64■□□□□ 0.09
COL8A1-208ENST00000621757 C1QTNF8P60827 252 aa15.64■□□□□ 0.09
COL8A1-208ENST00000621757 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
COL8A1-208ENST00000621757 BRCA1P38398 1863 aaKnown RBP15.63■□□□□ 0.09
COL8A1-208ENST00000621757 ANXA1P04083 346 aa15.63■□□□□ 0.09
COL8A1-208ENST00000621757 YBX3P16989 372 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL8A1-208ENST00000621757 PDIA6Q15084 440 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms