RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
GTF2I-219ENST00000621040 RGL2O15211 777 aa11.29□□□□□ -0.6
GTF2I-219ENST00000621040 ADRA2BP18089 450 aa11.29□□□□□ -0.6
GTF2I-219ENST00000621040 MTFR1LQ9H019 292 aa11.29□□□□□ -0.6
GTF2I-219ENST00000621040 SOS1Q07889 1333 aaPredicted RBP11.29□□□□□ -0.6
GTF2I-219ENST00000621040 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
GTF2I-219ENST00000621040 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
GTF2I-219ENST00000621040 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
GTF2I-219ENST00000621040 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 ADAMTS8Q9UP79 889 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 ZNF853P0CG23 659 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
GTF2I-219ENST00000621040 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 ZNF790Q6PG37 636 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 FLAD1Q8NFF5 587 aa11.28□□□□□ -0.6
GTF2I-219ENST00000621040 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
GTF2I-219ENST00000621040 CHD4Q14839 1912 aa11.27□□□□□ -0.6
GTF2I-219ENST00000621040 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.61
GTF2I-219ENST00000621040 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
GTF2I-219ENST00000621040 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
GTF2I-219ENST00000621040 KCNQ4P56696 695 aa11.26□□□□□ -0.61
GTF2I-219ENST00000621040 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
GTF2I-219ENST00000621040 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
GTF2I-219ENST00000621040 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
GTF2I-219ENST00000621040 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
GTF2I-219ENST00000621040 ZNF496Q96IT1 587 aaPredicted RBP11.25□□□□□ -0.61
GTF2I-219ENST00000621040 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
GTF2I-219ENST00000621040 MCM10Q7L590 875 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 KCNQ3O43525 872 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
GTF2I-219ENST00000621040 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 RIC1Q4ADV7 1423 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
GTF2I-219ENST00000621040 COL15A1P39059 1388 aa11.24□□□□□ -0.61
GTF2I-219ENST00000621040 CHL1O00533 1208 aa11.23□□□□□ -0.61
GTF2I-219ENST00000621040 EIF5P55010 431 aaKnown RBP11.23□□□□□ -0.61
GTF2I-219ENST00000621040 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
GTF2I-219ENST00000621040 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
GTF2I-219ENST00000621040 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
GTF2I-219ENST00000621040 PXDNLA1KZ92 1463 aa11.23□□□□□ -0.61
GTF2I-219ENST00000621040 TEX13AQ9BXU3 409 aaPredicted RBP11.22□□□□□ -0.61
GTF2I-219ENST00000621040 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 SBF1O95248 1867 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 IL16Q14005 1332 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
GTF2I-219ENST00000621040 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.61
GTF2I-219ENST00000621040 BTBD11A6QL63 1104 aa11.21□□□□□ -0.61
GTF2I-219ENST00000621040 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
GTF2I-219ENST00000621040 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
GTF2I-219ENST00000621040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.62
GTF2I-219ENST00000621040 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.62
GTF2I-219ENST00000621040 ATP10DQ9P241 1426 aa11.21□□□□□ -0.62
GTF2I-219ENST00000621040 GYS1P13807 737 aa11.21□□□□□ -0.62
GTF2I-219ENST00000621040 TM4SF1P30408 202 aa11.21□□□□□ -0.62
GTF2I-219ENST00000621040 MRS2Q9HD23 443 aa11.21□□□□□ -0.62
GTF2I-219ENST00000621040 IBTKQ9P2D0 1353 aaPredicted RBP11.2□□□□□ -0.62
GTF2I-219ENST00000621040 GIGYF1O75420 1035 aaPredicted RBP11.2□□□□□ -0.62
GTF2I-219ENST00000621040 TEFQ10587 303 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
GTF2I-219ENST00000621040 AK7Q96M32 723 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 TFCP2L1Q9NZI6 479 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 IL6STP40189 918 aaPredicted RBP11.2□□□□□ -0.62
GTF2I-219ENST00000621040 RIPK4P57078 832 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 LTBP1Q14766 1721 aa11.2□□□□□ -0.62
GTF2I-219ENST00000621040 HOXB7P09629 217 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 FGD1P98174 961 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 PDIA6Q15084 440 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 GNPATO15228 680 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
GTF2I-219ENST00000621040 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
GTF2I-219ENST00000621040 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 PPP4R2Q9NY27 417 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
GTF2I-219ENST00000621040 SNRPA1P09661 255 aaKnown RBP11.18□□□□□ -0.62
GTF2I-219ENST00000621040 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
GTF2I-219ENST00000621040 IFT57Q9NWB7 429 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
GTF2I-219ENST00000621040 MYH3P11055 1940 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
GTF2I-219ENST00000621040 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
GTF2I-219ENST00000621040 SRCAPQ6ZRS2 3230 aa11.17□□□□□ -0.62
GTF2I-219ENST00000621040 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
GTF2I-219ENST00000621040 IPO9Q96P70 1041 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms