RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 WWC1Q8IX03 1113 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 POGKQ9P215 609 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
SENP3-210ENST00000619785 NUTM1Q86Y26 1132 aa10.71□□□□□ -0.69
SENP3-210ENST00000619785 SULF1Q8IWU6 871 aa10.71□□□□□ -0.69
SENP3-210ENST00000619785 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
SENP3-210ENST00000619785 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
SENP3-210ENST00000619785 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
SENP3-210ENST00000619785 CEP350Q5VT06 3117 aa10.71□□□□□ -0.7
SENP3-210ENST00000619785 TUBGCP6Q96RT7 1819 aa10.7□□□□□ -0.7
SENP3-210ENST00000619785 C1QTNF8P60827 252 aa10.7□□□□□ -0.7
SENP3-210ENST00000619785 SAFB2Q14151 953 aaKnown RBP eCLIP10.7□□□□□ -0.7
SENP3-210ENST00000619785 NGDNQ8NEJ9 315 aaKnown RBP10.7□□□□□ -0.7
SENP3-210ENST00000619785 NUDT16Q96DE0 195 aaKnown RBP10.7□□□□□ -0.7
SENP3-210ENST00000619785 PRM3Q9NNZ6 103 aa10.7□□□□□ -0.7
SENP3-210ENST00000619785 PPP1R1BQ9UD71 204 aaPredicted RBP10.7□□□□□ -0.7
SENP3-210ENST00000619785 LIMD1Q9UGP4 676 aa10.7□□□□□ -0.7
SENP3-210ENST00000619785 RCCD1A6NED2 376 aa10.69□□□□□ -0.7
SENP3-210ENST00000619785 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
SENP3-210ENST00000619785 HIRIP3Q9BW71 556 aaPredicted RBP10.69□□□□□ -0.7
SENP3-210ENST00000619785 STRN4Q9NRL3 753 aa10.69□□□□□ -0.7
SENP3-210ENST00000619785 BTAF1O14981 1849 aa10.69□□□□□ -0.7
SENP3-210ENST00000619785 ZC3H6P61129 1189 aaKnown RBP10.68□□□□□ -0.7
SENP3-210ENST00000619785 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
SENP3-210ENST00000619785 PPP2R2DQ66LE6 453 aa10.68□□□□□ -0.7
SENP3-210ENST00000619785 SYT17Q9BSW7 474 aa10.68□□□□□ -0.7
SENP3-210ENST00000619785 PDGFDQ9GZP0 370 aaPredicted RBP10.68□□□□□ -0.7
SENP3-210ENST00000619785 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
SENP3-210ENST00000619785 ACEP12821 1306 aa10.67□□□□□ -0.7
SENP3-210ENST00000619785 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
SENP3-210ENST00000619785 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 GCP02774 474 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 CD46P15529 392 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.7
SENP3-210ENST00000619785 CDCA7Q9BWT1 371 aaPredicted RBP10.66□□□□□ -0.7
SENP3-210ENST00000619785 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
SENP3-210ENST00000619785 LY75O60449 1722 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 EVA1CP58658 441 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 SLC15A2Q16348 729 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 TUSC1Q2TAM9 212 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 PTF1AQ7RTS3 328 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
SENP3-210ENST00000619785 NFAT5O94916 1531 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 SPTLC1O15269 473 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 DNAJB2P25686 324 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 MARCH10Q8NA82 808 aaPredicted RBP10.64□□□□□ -0.71
SENP3-210ENST00000619785 FHDC1Q9C0D6 1143 aaPredicted RBP10.64□□□□□ -0.71
SENP3-210ENST00000619785 USP6P35125 1406 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 CPSF1Q10570 1443 aaKnown RBP10.64□□□□□ -0.71
SENP3-210ENST00000619785 TNS2Q63HR2 1409 aa10.64□□□□□ -0.71
SENP3-210ENST00000619785 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 DDB1Q16531 1140 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
SENP3-210ENST00000619785 NUDT18Q6ZVK8 323 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 EYA1Q99502 592 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 MON2Q7Z3U7 1717 aa10.63□□□□□ -0.71
SENP3-210ENST00000619785 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
SENP3-210ENST00000619785 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
SENP3-210ENST00000619785 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 MOXD2PA6NHM9 499 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 ZBTB7AO95365 584 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 COL9A1P20849 921 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 PTPREP23469 700 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 ABL2P42684 1182 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 LTN1O94822 1766 aa10.61□□□□□ -0.71
SENP3-210ENST00000619785 FAM208AQ9UK61 1670 aaKnown RBP10.6□□□□□ -0.71
SENP3-210ENST00000619785 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 AP1G2O75843 785 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 STK32BQ9NY57 414 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
SENP3-210ENST00000619785 GJA5P36382 358 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 ARHGEF25Q86VW2 580 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
SENP3-210ENST00000619785 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 CCDC7Q96M83 1385 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
SENP3-210ENST00000619785 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
SENP3-210ENST00000619785 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms