RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 FGD1P98174 961 aa23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 CWF19L2Q2TBE0 894 aaKnown RBP23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 HSCBQ8IWL3 235 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 KIF2CQ99661 725 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 ANTXR1Q9H6X2 564 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 SRGAP3O43295 1099 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 HOXB7P09629 217 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 PHKG2P15735 406 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 FOXD4L1Q9NU39 408 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 PRDM4Q9UKN5 801 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
LAPTM4B-204ENST00000619747 CD2BP2O95400 341 aaKnown RBP23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 PRDM11Q9NQV5 511 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 ALS2Q96Q42 1657 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 CYP27B1O15528 508 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 SLAIN2Q9P270 581 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 TNS3Q68CZ2 1445 aa23.79■■□□□ 1.4
LAPTM4B-204ENST00000619747 MEGF6O75095 1541 aa23.78■■□□□ 1.4
LAPTM4B-204ENST00000619747 ADCY9O60503 1353 aa23.78■■□□□ 1.4
LAPTM4B-204ENST00000619747 NCAPD2Q15021 1401 aa23.78■■□□□ 1.4
LAPTM4B-204ENST00000619747 CACNA1FO60840 1977 aa23.78■■□□□ 1.4
LAPTM4B-204ENST00000619747 NUTM1Q86Y26 1132 aa23.77■■□□□ 1.4
LAPTM4B-204ENST00000619747 SLC52A2Q9HAB3 445 aa23.77■■□□□ 1.4
LAPTM4B-204ENST00000619747 LMO7Q8WWI1 1683 aa23.77■■□□□ 1.4
LAPTM4B-204ENST00000619747 IFNL2Q8IZJ0 200 aa23.76■■□□□ 1.39
LAPTM4B-204ENST00000619747 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
LAPTM4B-204ENST00000619747 RILPL2Q969X0 211 aa23.76■■□□□ 1.39
LAPTM4B-204ENST00000619747 ZNF496Q96IT1 587 aaPredicted RBP23.76■■□□□ 1.39
LAPTM4B-204ENST00000619747 TRIM6-TRIM34B2RNG4 842 aa23.75■■□□□ 1.39
LAPTM4B-204ENST00000619747 PDCL3Q9H2J4 239 aa23.75■■□□□ 1.39
LAPTM4B-204ENST00000619747 DCCP43146 1447 aa23.75■■□□□ 1.39
LAPTM4B-204ENST00000619747 GOLGA6L3A6NEY3 463 aa23.75■■□□□ 1.39
LAPTM4B-204ENST00000619747 MX1P20591 662 aa23.74■■□□□ 1.39
LAPTM4B-204ENST00000619747 TOM1L2Q6ZVM7 507 aa23.74■■□□□ 1.39
LAPTM4B-204ENST00000619747 KDM3BQ7LBC6 1761 aa23.74■■□□□ 1.39
LAPTM4B-204ENST00000619747 KDM6AO15550 1401 aaPredicted RBP23.74■■□□□ 1.39
LAPTM4B-204ENST00000619747 STRN4Q9NRL3 753 aa23.74■■□□□ 1.39
LAPTM4B-204ENST00000619747 IBTKQ9P2D0 1353 aaPredicted RBP23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 MAP4K4O95819 1239 aaPredicted RBP23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 SSH3Q8TE77 659 aa23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 GZF1Q9H116 711 aaPredicted RBP23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 USP16Q9Y5T5 823 aa23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 KSR2Q6VAB6 950 aa23.73■■□□□ 1.39
LAPTM4B-204ENST00000619747 HSP90AB1P08238 724 aaKnown RBP23.72■■□□□ 1.39
LAPTM4B-204ENST00000619747 CHMP4AQ9BY43 222 aa23.72■■□□□ 1.39
LAPTM4B-204ENST00000619747 PDIA6Q15084 440 aa23.71■■□□□ 1.39
LAPTM4B-204ENST00000619747 CASC1Q6TDU7 716 aa23.71■■□□□ 1.39
LAPTM4B-204ENST00000619747 TTC5Q8N0Z6 440 aa23.71■■□□□ 1.39
LAPTM4B-204ENST00000619747 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
LAPTM4B-204ENST00000619747 USP26Q9BXU7 913 aa23.71■■□□□ 1.39
LAPTM4B-204ENST00000619747 RIC3Q7Z5B4 369 aa23.7■■□□□ 1.39
LAPTM4B-204ENST00000619747 UNC5CLQ8IV45 518 aa23.7■■□□□ 1.39
LAPTM4B-204ENST00000619747 OS9Q13438 667 aaPredicted RBP23.7■■□□□ 1.38
LAPTM4B-204ENST00000619747 DDX21Q9NR30 783 aaKnown RBP eCLIP23.7■■□□□ 1.38
LAPTM4B-204ENST00000619747 HYPKQ9NX55 129 aa23.7■■□□□ 1.38
LAPTM4B-204ENST00000619747 PA2G4Q9UQ80 394 aaKnown RBP23.7■■□□□ 1.38
LAPTM4B-204ENST00000619747 HEG1Q9ULI3 1381 aa23.7■■□□□ 1.38
LAPTM4B-204ENST00000619747 CABP4P57796 275 aa23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 DDX54Q8TDD1 881 aaKnown RBP23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 COPS6Q7L5N1 327 aa23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 OSBPL3Q9H4L5 887 aa23.69■■□□□ 1.38
LAPTM4B-204ENST00000619747 XAGE3Q8WTP9 111 aa23.68■■□□□ 1.38
LAPTM4B-204ENST00000619747 DCAF5Q96JK2 942 aa23.68■■□□□ 1.38
LAPTM4B-204ENST00000619747 PXDNLA1KZ92 1463 aa23.68■■□□□ 1.38
LAPTM4B-204ENST00000619747 ERBB4Q15303 1308 aa23.68■■□□□ 1.38
LAPTM4B-204ENST00000619747 SALL3Q9BXA9 1300 aa23.67■■□□□ 1.38
LAPTM4B-204ENST00000619747 POLA2Q14181 598 aa23.66■■□□□ 1.38
LAPTM4B-204ENST00000619747 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
LAPTM4B-204ENST00000619747 FSD2A1L4K1 749 aa23.66■■□□□ 1.38
LAPTM4B-204ENST00000619747 ESPNB1AK53 854 aa23.66■■□□□ 1.38
LAPTM4B-204ENST00000619747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.66■■□□□ 1.38
LAPTM4B-204ENST00000619747 PDE4CQ08493 712 aa23.65■■□□□ 1.38
LAPTM4B-204ENST00000619747 SNX21Q969T3 373 aa23.65■■□□□ 1.38
LAPTM4B-204ENST00000619747 DDX58O95786 925 aaKnown RBP23.65■■□□□ 1.38
LAPTM4B-204ENST00000619747 COL18A1P39060 1754 aa23.64■■□□□ 1.38
LAPTM4B-204ENST00000619747 ERC2O15083 957 aa23.64■■□□□ 1.37
LAPTM4B-204ENST00000619747 XIRP1Q702N8 1843 aaKnown RBP23.64■■□□□ 1.37
LAPTM4B-204ENST00000619747 EVA1CP58658 441 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 CHMP5Q9NZZ3 219 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 CAMTA1Q9Y6Y1 1673 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 IGKV5-2P06315 115 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 LARP1Q6PKG0 1096 aaKnown RBP23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 MYD88Q99836 296 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 GRM8O00222 908 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 PTCD1O75127 700 aaKnown RBP23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 LINS1Q8NG48 757 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
LAPTM4B-204ENST00000619747 TPM2P07951 284 aa23.62■■□□□ 1.37
LAPTM4B-204ENST00000619747 KLHDC4Q8TBB5 520 aa23.62■■□□□ 1.37
LAPTM4B-204ENST00000619747 SOS2Q07890 1332 aaPredicted RBP23.62■■□□□ 1.37
LAPTM4B-204ENST00000619747 ALDH1L1O75891 902 aa23.62■■□□□ 1.37
LAPTM4B-204ENST00000619747 REC8O95072 547 aa23.62■■□□□ 1.37
LAPTM4B-204ENST00000619747 KIF1BPQ96EK5 621 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms