RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 RIPK4P57078 832 aa22.5■■□□□ 1.19
LHX1-202ENST00000616237 SRP68Q9UHB9 627 aaKnown RBP22.5■■□□□ 1.19
LHX1-202ENST00000616237 PRAMEF22A3QJZ6 481 aa22.49■■□□□ 1.19
LHX1-202ENST00000616237 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
LHX1-202ENST00000616237 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
LHX1-202ENST00000616237 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
LHX1-202ENST00000616237 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
LHX1-202ENST00000616237 STARD3NLO95772 234 aa22.47■■□□□ 1.19
LHX1-202ENST00000616237 TEX13AQ9BXU3 409 aaPredicted RBP22.47■■□□□ 1.19
LHX1-202ENST00000616237 USP16Q9Y5T5 823 aa22.47■■□□□ 1.19
LHX1-202ENST00000616237 MMP10P09238 476 aa22.46■■□□□ 1.19
LHX1-202ENST00000616237 CANXP27824 592 aaKnown RBP22.46■■□□□ 1.19
LHX1-202ENST00000616237 NLGN1Q8N2Q7 840 aa22.46■■□□□ 1.19
LHX1-202ENST00000616237 COL15A1P39059 1388 aa22.45■■□□□ 1.18
LHX1-202ENST00000616237 UTRNP46939 3433 aa22.44■■□□□ 1.18
LHX1-202ENST00000616237 A1BGP04217 495 aa22.44■■□□□ 1.18
LHX1-202ENST00000616237 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
LHX1-202ENST00000616237 FKBP8Q14318 412 aa22.44■■□□□ 1.18
LHX1-202ENST00000616237 NEUROD2Q15784 382 aa22.44■■□□□ 1.18
LHX1-202ENST00000616237 KDM3BQ7LBC6 1761 aa22.44■■□□□ 1.18
LHX1-202ENST00000616237 SNRPA1P09661 255 aaKnown RBP22.43■■□□□ 1.18
LHX1-202ENST00000616237 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
LHX1-202ENST00000616237 ANP32CO43423 234 aa22.42■■□□□ 1.18
LHX1-202ENST00000616237 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
LHX1-202ENST00000616237 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
LHX1-202ENST00000616237 NARFQ9UHQ1 456 aa22.42■■□□□ 1.18
LHX1-202ENST00000616237 CD2APQ9Y5K6 639 aa22.42■■□□□ 1.18
LHX1-202ENST00000616237 BCL2L12Q9HB09 334 aa22.41■■□□□ 1.18
LHX1-202ENST00000616237 GOLGB1Q14789 3259 aaKnown RBP22.4■■□□□ 1.18
LHX1-202ENST00000616237 PIP4K2AP48426 406 aaPredicted RBP22.4■■□□□ 1.18
LHX1-202ENST00000616237 EIF4A1P60842 406 aaKnown RBP22.4■■□□□ 1.18
LHX1-202ENST00000616237 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.18
LHX1-202ENST00000616237 DDR1Q08345 913 aa22.39■■□□□ 1.18
LHX1-202ENST00000616237 LMOD3Q0VAK6 560 aa22.39■■□□□ 1.18
LHX1-202ENST00000616237 ZPR1O75312 459 aa22.38■■□□□ 1.17
LHX1-202ENST00000616237 APAF1O14727 1248 aa22.38■■□□□ 1.17
LHX1-202ENST00000616237 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
LHX1-202ENST00000616237 TM4SF1P30408 202 aa22.38■■□□□ 1.17
LHX1-202ENST00000616237 NBPF26B4DH59 902 aa22.37■■□□□ 1.17
LHX1-202ENST00000616237 NBPF10Q6P3W6 841 aaKnown RBP22.37■■□□□ 1.17
LHX1-202ENST00000616237 NBPF15Q8N660 670 aa22.37■■□□□ 1.17
LHX1-202ENST00000616237 TSPYL4Q9UJ04 414 aa22.37■■□□□ 1.17
LHX1-202ENST00000616237 ZNF330Q9Y3S2 320 aaPredicted RBP22.37■■□□□ 1.17
LHX1-202ENST00000616237 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
LHX1-202ENST00000616237 PARP3Q9Y6F1 533 aa22.36■■□□□ 1.17
LHX1-202ENST00000616237 A0A087WZG4 1122 aa22.35■■□□□ 1.17
LHX1-202ENST00000616237 DCAF8L1A6NGE4 600 aa22.35■■□□□ 1.17
LHX1-202ENST00000616237 NFIXQ14938 502 aa22.35■■□□□ 1.17
LHX1-202ENST00000616237 MRS2Q9HD23 443 aa22.35■■□□□ 1.17
LHX1-202ENST00000616237 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
LHX1-202ENST00000616237 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
LHX1-202ENST00000616237 BABAM1Q9NWV8 329 aa22.34■■□□□ 1.17
LHX1-202ENST00000616237 KIF13BQ9NQT8 1826 aa22.33■■□□□ 1.17
LHX1-202ENST00000616237 YBX3P16989 372 aaKnown RBP eCLIP22.33■■□□□ 1.17
LHX1-202ENST00000616237 LAMB4A4D0S4 1761 aa22.33■■□□□ 1.16
LHX1-202ENST00000616237 CHL1O00533 1208 aa22.32■■□□□ 1.16
LHX1-202ENST00000616237 CAMTA2O94983 1202 aa22.32■■□□□ 1.16
LHX1-202ENST00000616237 GPR162Q16538 588 aa22.32■■□□□ 1.16
LHX1-202ENST00000616237 KIAA1551Q9HCM1 1747 aa22.32■■□□□ 1.16
LHX1-202ENST00000616237 SCN7AQ01118 1682 aa22.31■■□□□ 1.16
LHX1-202ENST00000616237 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
LHX1-202ENST00000616237 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
LHX1-202ENST00000616237 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
LHX1-202ENST00000616237 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
LHX1-202ENST00000616237 TBC1D9BQ66K14 1250 aa22.29■■□□□ 1.16
LHX1-202ENST00000616237 WWC3Q9ULE0 1092 aa22.29■■□□□ 1.16
LHX1-202ENST00000616237 KRT24Q2M2I5 525 aa22.28■■□□□ 1.16
LHX1-202ENST00000616237 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
LHX1-202ENST00000616237 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
LHX1-202ENST00000616237 NRXN2Q9P2S2 1712 aa22.27■■□□□ 1.16
LHX1-202ENST00000616237 BCORQ6W2J9 1755 aa22.27■■□□□ 1.16
LHX1-202ENST00000616237 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.15
LHX1-202ENST00000616237 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
LHX1-202ENST00000616237 SERPINB2P05120 415 aa22.26■■□□□ 1.15
LHX1-202ENST00000616237 TGFB2P61812 414 aa22.26■■□□□ 1.15
LHX1-202ENST00000616237 NPM2Q86SE8 214 aaKnown RBP22.26■■□□□ 1.15
LHX1-202ENST00000616237 CFAP44Q96MT7 982 aa22.26■■□□□ 1.15
LHX1-202ENST00000616237 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
LHX1-202ENST00000616237 DPEP1P16444 411 aa22.25■■□□□ 1.15
LHX1-202ENST00000616237 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
LHX1-202ENST00000616237 KCNA3P22001 575 aa22.25■■□□□ 1.15
LHX1-202ENST00000616237 PDIA6Q15084 440 aa22.24■■□□□ 1.15
LHX1-202ENST00000616237 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
LHX1-202ENST00000616237 NGEFQ8N5V2 710 aa22.24■■□□□ 1.15
LHX1-202ENST00000616237 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
LHX1-202ENST00000616237 MYL6BP14649 208 aa22.23■■□□□ 1.15
LHX1-202ENST00000616237 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
LHX1-202ENST00000616237 YY1P25490 414 aa22.23■■□□□ 1.15
LHX1-202ENST00000616237 CARMIL3Q8ND23 1372 aa22.23■■□□□ 1.15
LHX1-202ENST00000616237 ERBB4Q15303 1308 aa22.22■■□□□ 1.15
LHX1-202ENST00000616237 HLFQ16534 295 aa22.22■■□□□ 1.15
LHX1-202ENST00000616237 TTLL7Q6ZT98 887 aa22.22■■□□□ 1.15
LHX1-202ENST00000616237 ANXA1P04083 346 aa22.21■■□□□ 1.15
LHX1-202ENST00000616237 CHRNA5P30532 468 aa22.21■■□□□ 1.15
LHX1-202ENST00000616237 PROSER3Q2NL68 480 aa22.21■■□□□ 1.15
LHX1-202ENST00000616237 CLEC4GQ6UXB4 293 aa22.21■■□□□ 1.15
LHX1-202ENST00000616237 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
LHX1-202ENST00000616237 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
LHX1-202ENST00000616237 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
LHX1-202ENST00000616237 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms