RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 CTNNA3Q9UI47 895 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 USP48Q86UV5 1035 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 RRAGDQ9NQL2 400 aaPredicted RBP10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 RNF216Q9NWF9 866 aaPredicted RBP10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 UBE2HP62256 183 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
SH3GLB1-205ENST00000616170 ANO6Q4KMQ2 910 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 KRT222Q8N1A0 295 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 SMARCC1Q92922 1105 aaPredicted RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 DDX19AQ9NUU7 478 aaKnown RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 HSP90AA4PQ58FG1 418 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 BMP2KLQ5H9B9 411 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 POLR3DP05423 398 aaPredicted RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 TTC22Q5TAA0 569 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 PCDHB15Q9Y5E8 787 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 NECAB1Q8N987 351 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 PAXBP1Q9Y5B6 917 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 RTEL1-TNFRSF6BF6WH68 1400 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 SSR1P43307 286 aaKnown RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 ZSCAN25Q6NSZ9 544 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 FAM107BQ9H098 131 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 CDK13Q14004 1512 aaKnown RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
SH3GLB1-205ENST00000616170 UVSSAQ2YD98 709 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 CCDC186Q7Z3E2 898 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 HECW1Q76N89 1606 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 SEC24BO95487 1268 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 MATR3P43243 847 aaKnown RBP eCLIP10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 CCDC12Q8WUD4 166 aaPredicted RBP10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 GSDMDP57764 484 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 LUZP1Q86V48 1076 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 STRN4Q9NRL3 753 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 CTAGE5O15320 804 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 GBP2P32456 591 aaPredicted RBP10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 GNG11P61952 73 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 NEMFO60524 1076 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 WASF1Q92558 559 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 INCENPQ9NQS7 918 aa10.81□□□□□ -0.68
SH3GLB1-205ENST00000616170 AIDAQ96BJ3 306 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 GNL3LQ9NVN8 582 aaKnown RBP10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 ZKSCAN5Q9Y2L8 839 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 PTPN23Q9H3S7 1636 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 ATP2C2O75185 946 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 CEP126Q9P2H0 1117 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 USP5P45974 858 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 NUCB1Q02818 461 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 TNNQ9UQP3 1299 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 EFCAB5A4FU69 1503 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 ATF3P18847 181 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 GTF2A1P52655 376 aaPredicted RBP10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
SH3GLB1-205ENST00000616170 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 CCDC94Q9BW85 323 aaPredicted RBP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 ZSCAN22P10073 491 aaPredicted RBP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 RSPH14Q9UHP6 348 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 GOLGA8BA8MQT2 603 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 MEX3CQ5U5Q3 659 aaKnown RBP10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 USHBP1Q8N6Y0 703 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 SKILP12757 684 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 MCM3P25205 808 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 MYD88Q99836 296 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
SH3GLB1-205ENST00000616170 SDSP20132 328 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 MNAT1P51948 309 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 DNAI1Q9UI46 699 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 HLTFQ14527 1009 aaKnown RBP eCLIP10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 MCM6Q14566 821 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 C16orf71Q8IYS4 520 aaPredicted RBP10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 SLC26A8Q96RN1 970 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 DNAJC25Q9H1X3 360 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 MAATS1Q7Z4T9 603 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 YEATS4O95619 227 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 TCEANC2Q96MN5 208 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 ZNF692Q9BU19 519 aaPredicted RBP10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
SH3GLB1-205ENST00000616170 FAM83GA6ND36 823 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms