RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PHAXQ9H814 394 aaKnown RBP16.81■□□□□ 0.28
SSBP2-220ENST00000615665 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
SSBP2-220ENST00000615665 ECHDC1Q9NTX5 307 aa16.81■□□□□ 0.28
SSBP2-220ENST00000615665 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
SSBP2-220ENST00000615665 BICD2Q8TD16 824 aa16.8■□□□□ 0.28
SSBP2-220ENST00000615665 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
SSBP2-220ENST00000615665 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
SSBP2-220ENST00000615665 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
SSBP2-220ENST00000615665 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
SSBP2-220ENST00000615665 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
SSBP2-220ENST00000615665 ZSCAN31Q96LW9 406 aaPredicted RBP16.8■□□□□ 0.28
SSBP2-220ENST00000615665 GCP02774 474 aa16.79■□□□□ 0.28
SSBP2-220ENST00000615665 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
SSBP2-220ENST00000615665 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
SSBP2-220ENST00000615665 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
SSBP2-220ENST00000615665 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
SSBP2-220ENST00000615665 WASHC4Q2M389 1173 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 USP19O94966 1318 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
SSBP2-220ENST00000615665 MYOM1P52179 1685 aa16.77■□□□□ 0.28
SSBP2-220ENST00000615665 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
SSBP2-220ENST00000615665 ANAPC15P60006 121 aa16.77■□□□□ 0.28
SSBP2-220ENST00000615665 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
SSBP2-220ENST00000615665 IFNL2Q8IZJ0 200 aa16.77■□□□□ 0.28
SSBP2-220ENST00000615665 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.27
SSBP2-220ENST00000615665 KSR2Q6VAB6 950 aa16.77■□□□□ 0.27
SSBP2-220ENST00000615665 CPLX1O14810 134 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 APPP05067 770 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 FOSBP53539 338 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 MYO3AQ8NEV4 1616 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 ESPNB1AK53 854 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
SSBP2-220ENST00000615665 LARP1BQ659C4 914 aaKnown RBP16.75■□□□□ 0.27
SSBP2-220ENST00000615665 FAM13BQ9NYF5 915 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 IGSF1Q8N6C5 1336 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
SSBP2-220ENST00000615665 CHMLP26374 656 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 TRDNQ13061 729 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 STK3Q13188 491 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 PNMA6EA0A0J9YXQ4 647 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 SYCE3A1L190 88 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 SIRT2Q8IXJ6 389 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
SSBP2-220ENST00000615665 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
SSBP2-220ENST00000615665 CPLX2Q6PUV4 134 aaKnown RBP16.74■□□□□ 0.27
SSBP2-220ENST00000615665 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
SSBP2-220ENST00000615665 GOLGA6L19H0YKK7 550 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
SSBP2-220ENST00000615665 HOXB7P09629 217 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 NBPF6Q5VWK0 638 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 NBPF4Q96M43 638 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
SSBP2-220ENST00000615665 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
SSBP2-220ENST00000615665 GRM8O00222 908 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
SSBP2-220ENST00000615665 TPM4P67936 248 aa16.73■□□□□ 0.27
SSBP2-220ENST00000615665 KRT32Q14532 448 aa16.73■□□□□ 0.27
SSBP2-220ENST00000615665 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
SSBP2-220ENST00000615665 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
SSBP2-220ENST00000615665 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
SSBP2-220ENST00000615665 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
SSBP2-220ENST00000615665 A0A087WZG4 1122 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 BECN2A8MW95 431 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 KRT85P78386 507 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
SSBP2-220ENST00000615665 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
SSBP2-220ENST00000615665 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
SSBP2-220ENST00000615665 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 CCDC57Q2TAC2 916 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 SASS6Q6UVJ0 657 aa16.72■□□□□ 0.27
SSBP2-220ENST00000615665 ZGPATQ8N5A5 531 aaKnown RBP16.72■□□□□ 0.27
SSBP2-220ENST00000615665 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
SSBP2-220ENST00000615665 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
SSBP2-220ENST00000615665 AGLP35573 1532 aa16.71■□□□□ 0.27
SSBP2-220ENST00000615665 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
SSBP2-220ENST00000615665 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
SSBP2-220ENST00000615665 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
SSBP2-220ENST00000615665 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
SSBP2-220ENST00000615665 PANK2Q9BZ23 570 aa16.71■□□□□ 0.27
SSBP2-220ENST00000615665 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 CCDC73Q6ZRK6 1079 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
SSBP2-220ENST00000615665 TTC41PQ6P2S7 1318 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms