RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 RFC4P35249 363 aa33.31■■■□□ 2.92
SURF1-205ENST00000615505 MIS18AQ9NYP9 233 aa33.3■■■□□ 2.92
SURF1-205ENST00000615505 COL24A1Q17RW2 1714 aa33.28■■■□□ 2.92
SURF1-205ENST00000615505 SNRPA1P09661 255 aaKnown RBP33.27■■■□□ 2.92
SURF1-205ENST00000615505 ZBTB1Q9Y2K1 713 aa33.26■■■□□ 2.91
SURF1-205ENST00000615505 FHDC1Q9C0D6 1143 aaPredicted RBP33.25■■■□□ 2.91
SURF1-205ENST00000615505 SOS1Q07889 1333 aaPredicted RBP33.25■■■□□ 2.91
SURF1-205ENST00000615505 APAF1O14727 1248 aa33.24■■■□□ 2.91
SURF1-205ENST00000615505 CANXP27824 592 aaKnown RBP33.24■■■□□ 2.91
SURF1-205ENST00000615505 NLGN1Q8N2Q7 840 aa33.23■■■□□ 2.91
SURF1-205ENST00000615505 TRIM35Q9UPQ4 493 aa33.23■■■□□ 2.91
SURF1-205ENST00000615505 BABAM1Q9NWV8 329 aa33.22■■■□□ 2.91
SURF1-205ENST00000615505 SYT17Q9BSW7 474 aa33.21■■■□□ 2.91
SURF1-205ENST00000615505 TSPYL4Q9UJ04 414 aa33.21■■■□□ 2.91
SURF1-205ENST00000615505 USP16Q9Y5T5 823 aa33.21■■■□□ 2.91
SURF1-205ENST00000615505 ZPR1O75312 459 aa33.19■■■□□ 2.9
SURF1-205ENST00000615505 GYS1P13807 737 aa33.19■■■□□ 2.9
SURF1-205ENST00000615505 KLHL34Q8N239 644 aa33.19■■■□□ 2.9
SURF1-205ENST00000615505 COL15A1P39059 1388 aa33.19■■■□□ 2.9
SURF1-205ENST00000615505 PRAMEF22A3QJZ6 481 aa33.18■■■□□ 2.9
SURF1-205ENST00000615505 A1BGP04217 495 aa33.18■■■□□ 2.9
SURF1-205ENST00000615505 EIF4A1P60842 406 aaKnown RBP33.18■■■□□ 2.9
SURF1-205ENST00000615505 USP42Q9H9J4 1324 aaKnown RBP33.18■■■□□ 2.9
SURF1-205ENST00000615505 KDM3BQ7LBC6 1761 aa33.18■■■□□ 2.9
SURF1-205ENST00000615505 EIF5P55010 431 aaKnown RBP33.17■■■□□ 2.9
SURF1-205ENST00000615505 NPM2Q86SE8 214 aaKnown RBP33.17■■■□□ 2.9
SURF1-205ENST00000615505 SRP68Q9UHB9 627 aaKnown RBP33.17■■■□□ 2.9
SURF1-205ENST00000615505 A0A087WZG4 1122 aa33.16■■■□□ 2.9
SURF1-205ENST00000615505 IL6STP40189 918 aaPredicted RBP33.16■■■□□ 2.9
SURF1-205ENST00000615505 C4AP0C0L4 1744 aa33.16■■■□□ 2.9
SURF1-205ENST00000615505 NARFQ9UHQ1 456 aa33.15■■■□□ 2.9
SURF1-205ENST00000615505 GIGYF1O75420 1035 aaPredicted RBP33.14■■■□□ 2.9
SURF1-205ENST00000615505 MMP10P09238 476 aa33.14■■■□□ 2.9
SURF1-205ENST00000615505 ZNF330Q9Y3S2 320 aaPredicted RBP33.13■■■□□ 2.89
SURF1-205ENST00000615505 LAS1LQ9Y4W2 734 aaKnown RBP33.13■■■□□ 2.89
SURF1-205ENST00000615505 USPL1Q5W0Q7 1092 aa33.12■■■□□ 2.89
SURF1-205ENST00000615505 DCAF8L1A6NGE4 600 aa33.11■■■□□ 2.89
SURF1-205ENST00000615505 CHL1O00533 1208 aa33.11■■■□□ 2.89
SURF1-205ENST00000615505 CALD1Q05682 793 aaKnown RBP33.11■■■□□ 2.89
SURF1-205ENST00000615505 FKBP8Q14318 412 aa33.1■■■□□ 2.89
SURF1-205ENST00000615505 CD2APQ9Y5K6 639 aa33.08■■■□□ 2.89
SURF1-205ENST00000615505 PARP3Q9Y6F1 533 aa33.08■■■□□ 2.89
SURF1-205ENST00000615505 FAM9BQ8IZU0 186 aa33.07■■■□□ 2.88
SURF1-205ENST00000615505 CFAP44Q96MT7 982 aa33.07■■■□□ 2.88
SURF1-205ENST00000615505 PIP4K2AP48426 406 aaPredicted RBP33.06■■■□□ 2.88
SURF1-205ENST00000615505 TBC1D2BQ9UPU7 963 aa33.05■■■□□ 2.88
SURF1-205ENST00000615505 NBPF26B4DH59 902 aa33.03■■■□□ 2.88
SURF1-205ENST00000615505 CCDC27Q2M243 656 aa33.03■■■□□ 2.88
SURF1-205ENST00000615505 NBPF10Q6P3W6 841 aaKnown RBP33.03■■■□□ 2.88
SURF1-205ENST00000615505 NBPF15Q8N660 670 aa33.03■■■□□ 2.88
SURF1-205ENST00000615505 LAMB4A4D0S4 1761 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 TM4SF1P30408 202 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 GNAI1P63096 354 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 NCBP3Q53F19 620 aaKnown RBP33.02■■■□□ 2.88
SURF1-205ENST00000615505 DZIP3Q86Y13 1208 aaKnown RBP33.02■■■□□ 2.88
SURF1-205ENST00000615505 NLGN2Q8NFZ4 835 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 BCL2L12Q9HB09 334 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 IFT57Q9NWB7 429 aa33.02■■■□□ 2.88
SURF1-205ENST00000615505 ZNF853P0CG23 659 aa33■■■□□ 2.87
SURF1-205ENST00000615505 SENP3-EIF4A1A0A087X0R7 540 aa32.98■■■□□ 2.87
SURF1-205ENST00000615505 EIF2S2P20042 333 aaKnown RBP32.98■■■□□ 2.87
SURF1-205ENST00000615505 DDR1Q08345 913 aa32.98■■■□□ 2.87
SURF1-205ENST00000615505 NFIXQ14938 502 aa32.98■■■□□ 2.87
SURF1-205ENST00000615505 MBIPQ9NS73 344 aa32.98■■■□□ 2.87
SURF1-205ENST00000615505 ERBB4Q15303 1308 aa32.98■■■□□ 2.87
SURF1-205ENST00000615505 WWC1Q8IX03 1113 aa32.97■■■□□ 2.87
SURF1-205ENST00000615505 POLRMTO00411 1230 aaKnown RBP32.96■■■□□ 2.87
SURF1-205ENST00000615505 CAMTA2O94983 1202 aa32.96■■■□□ 2.87
SURF1-205ENST00000615505 CCER2I3L3R5 266 aa32.93■■■□□ 2.86
SURF1-205ENST00000615505 MYL6BP14649 208 aa32.93■■■□□ 2.86
SURF1-205ENST00000615505 KRT24Q2M2I5 525 aa32.93■■■□□ 2.86
SURF1-205ENST00000615505 BICDL1Q6ZP65 573 aa32.93■■■□□ 2.86
SURF1-205ENST00000615505 ZNF652Q9Y2D9 606 aa32.93■■■□□ 2.86
SURF1-205ENST00000615505 HOXB7P09629 217 aa32.92■■■□□ 2.86
SURF1-205ENST00000615505 GPR162Q16538 588 aa32.92■■■□□ 2.86
SURF1-205ENST00000615505 TBC1D9BQ66K14 1250 aa32.92■■■□□ 2.86
SURF1-205ENST00000615505 DIEXFQ68CQ4 756 aaKnown RBP32.92■■■□□ 2.86
SURF1-205ENST00000615505 CLEC4GQ6UXB4 293 aa32.92■■■□□ 2.86
SURF1-205ENST00000615505 NGEFQ8N5V2 710 aa32.92■■■□□ 2.86
SURF1-205ENST00000615505 SCN7AQ01118 1682 aa32.91■■■□□ 2.86
SURF1-205ENST00000615505 SALL2Q9Y467 1007 aaPredicted RBP32.91■■■□□ 2.86
SURF1-205ENST00000615505 C10orf71Q711Q0 1435 aa32.91■■■□□ 2.86
SURF1-205ENST00000615505 RGL2O15211 777 aa32.9■■■□□ 2.86
SURF1-205ENST00000615505 SERPINB2P05120 415 aa32.9■■■□□ 2.86
SURF1-205ENST00000615505 TGFB2P61812 414 aa32.9■■■□□ 2.86
SURF1-205ENST00000615505 PELP1Q8IZL8 1130 aaKnown RBP32.89■■■□□ 2.86
SURF1-205ENST00000615505 SETDB2Q96T68 719 aa32.89■■■□□ 2.86
SURF1-205ENST00000615505 IL16Q14005 1332 aa32.88■■■□□ 2.85
SURF1-205ENST00000615505 DUSP27Q5VZP5 1158 aa32.88■■■□□ 2.85
SURF1-205ENST00000615505 NECTIN2Q92692 538 aa32.88■■■□□ 2.85
SURF1-205ENST00000615505 PDIA6Q15084 440 aa32.87■■■□□ 2.85
SURF1-205ENST00000615505 KIF6Q6ZMV9 814 aa32.87■■■□□ 2.85
SURF1-205ENST00000615505 HDGFL1Q5TGJ6 251 aa32.86■■■□□ 2.85
SURF1-205ENST00000615505 ERVV-1B6SEH8 477 aa32.85■■■□□ 2.85
SURF1-205ENST00000615505 WDR63Q8IWG1 891 aa32.85■■■□□ 2.85
SURF1-205ENST00000615505 KIF13BQ9NQT8 1826 aa32.85■■■□□ 2.85
SURF1-205ENST00000615505 BCORQ6W2J9 1755 aa32.85■■■□□ 2.85
SURF1-205ENST00000615505 CARMIL3Q8ND23 1372 aa32.84■■■□□ 2.85
SURF1-205ENST00000615505 TTLL7Q6ZT98 887 aa32.84■■■□□ 2.85
SURF1-205ENST00000615505 DDX21Q9NR30 783 aaKnown RBP eCLIP32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms