RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
ACACA-236ENST00000615229 SMIM5Q71RC9 77 aa28.1■■■□□ 2.09
ACACA-236ENST00000615229 R3HDM1Q15032 1099 aaKnown RBP28.09■■■□□ 2.09
ACACA-236ENST00000615229 PSDA5PKW4 1024 aaPredicted RBP28.08■■■□□ 2.09
ACACA-236ENST00000615229 AK7Q96M32 723 aa28.08■■■□□ 2.09
ACACA-236ENST00000615229 GOLGA2Q08379 1002 aa28.08■■■□□ 2.09
ACACA-236ENST00000615229 INTS5Q6P9B9 1019 aaKnown RBP28.08■■■□□ 2.09
ACACA-236ENST00000615229 CDCA7LQ96GN5 454 aa28.08■■■□□ 2.09
ACACA-236ENST00000615229 GNPATO15228 680 aa28.07■■■□□ 2.08
ACACA-236ENST00000615229 ZBTB1Q9Y2K1 713 aa28.07■■■□□ 2.08
ACACA-236ENST00000615229 RC3H1Q5TC82 1133 aaKnown RBP28.06■■■□□ 2.08
ACACA-236ENST00000615229 TEX13AQ9BXU3 409 aaPredicted RBP28.06■■■□□ 2.08
ACACA-236ENST00000615229 CCDC87Q9NVE4 849 aa28.06■■■□□ 2.08
ACACA-236ENST00000615229 STARD3NLO95772 234 aa28.05■■■□□ 2.08
ACACA-236ENST00000615229 A1BGP04217 495 aa28.05■■■□□ 2.08
ACACA-236ENST00000615229 C8orf58Q8NAV2 365 aa28.05■■■□□ 2.08
ACACA-236ENST00000615229 TFCP2L1Q9NZI6 479 aa28.05■■■□□ 2.08
ACACA-236ENST00000615229 PNPLA7Q6ZV29 1317 aa28.05■■■□□ 2.08
ACACA-236ENST00000615229 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
ACACA-236ENST00000615229 PDGFDQ9GZP0 370 aaPredicted RBP28.04■■■□□ 2.08
ACACA-236ENST00000615229 SLFN5Q08AF3 891 aa28.03■■■□□ 2.08
ACACA-236ENST00000615229 DUSP27Q5VZP5 1158 aa28.03■■■□□ 2.08
ACACA-236ENST00000615229 TSPYL6Q8N831 410 aa28.03■■■□□ 2.08
ACACA-236ENST00000615229 ZBED9Q6R2W3 1325 aa28.03■■■□□ 2.08
ACACA-236ENST00000615229 ELL2O00472 640 aaPredicted RBP28.02■■■□□ 2.08
ACACA-236ENST00000615229 PHF14O94880 888 aa28.02■■■□□ 2.08
ACACA-236ENST00000615229 MYH16Q9H6N6 1097 aa28.02■■■□□ 2.08
ACACA-236ENST00000615229 BCORQ6W2J9 1755 aa28.02■■■□□ 2.08
ACACA-236ENST00000615229 E9PSI1 815 aa28.02■■■□□ 2.08
ACACA-236ENST00000615229 CACNA1FO60840 1977 aa28.01■■■□□ 2.07
ACACA-236ENST00000615229 EIF2S2P20042 333 aaKnown RBP28.01■■■□□ 2.07
ACACA-236ENST00000615229 HMGB2P26583 209 aaKnown RBP28.01■■■□□ 2.07
ACACA-236ENST00000615229 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
ACACA-236ENST00000615229 NECTIN2Q92692 538 aa28.01■■■□□ 2.07
ACACA-236ENST00000615229 SOS1Q07889 1333 aaPredicted RBP28.01■■■□□ 2.07
ACACA-236ENST00000615229 RPS6KA4O75676 772 aa28■■■□□ 2.07
ACACA-236ENST00000615229 EXOSC9Q06265 439 aaKnown RBP28■■■□□ 2.07
ACACA-236ENST00000615229 SCN7AQ01118 1682 aa28■■■□□ 2.07
ACACA-236ENST00000615229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.99■■■□□ 2.07
ACACA-236ENST00000615229 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
ACACA-236ENST00000615229 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
ACACA-236ENST00000615229 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
ACACA-236ENST00000615229 RTCBQ9Y3I0 505 aaKnown RBP27.99■■■□□ 2.07
ACACA-236ENST00000615229 HOXB7P09629 217 aa27.98■■■□□ 2.07
ACACA-236ENST00000615229 SSFA2P28290 1259 aa27.98■■■□□ 2.07
ACACA-236ENST00000615229 COL23A1Q86Y22 540 aaPredicted RBP27.98■■■□□ 2.07
ACACA-236ENST00000615229 COL24A1Q17RW2 1714 aa27.98■■■□□ 2.07
ACACA-236ENST00000615229 COL15A1P39059 1388 aa27.97■■■□□ 2.07
ACACA-236ENST00000615229 TRMT2AQ8IZ69 625 aaKnown RBP27.97■■■□□ 2.07
ACACA-236ENST00000615229 TWISTNBQ3B726 338 aaPredicted RBP27.95■■■□□ 2.07
ACACA-236ENST00000615229 HDGFL1Q5TGJ6 251 aa27.95■■■□□ 2.07
ACACA-236ENST00000615229 ANXA1P04083 346 aa27.95■■■□□ 2.06
ACACA-236ENST00000615229 EIF5P55010 431 aaKnown RBP27.95■■■□□ 2.06
ACACA-236ENST00000615229 PROSER3Q2NL68 480 aa27.95■■■□□ 2.06
ACACA-236ENST00000615229 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
ACACA-236ENST00000615229 ZNF330Q9Y3S2 320 aaPredicted RBP27.95■■■□□ 2.06
ACACA-236ENST00000615229 ARHGEF1Q92888 912 aaKnown RBP27.94■■■□□ 2.06
ACACA-236ENST00000615229 NUP98P52948 1817 aa27.93■■■□□ 2.06
ACACA-236ENST00000615229 IL6STP40189 918 aaPredicted RBP27.93■■■□□ 2.06
ACACA-236ENST00000615229 PDIA6Q15084 440 aa27.93■■■□□ 2.06
ACACA-236ENST00000615229 MSH5O43196 834 aa27.92■■■□□ 2.06
ACACA-236ENST00000615229 MYL6BP14649 208 aa27.92■■■□□ 2.06
ACACA-236ENST00000615229 TRAPPC3LQ5T215 181 aa27.92■■■□□ 2.06
ACACA-236ENST00000615229 CHPF2Q9P2E5 772 aa27.92■■■□□ 2.06
ACACA-236ENST00000615229 ERBB4Q15303 1308 aa27.91■■■□□ 2.06
ACACA-236ENST00000615229 ADRA2BP18089 450 aa27.91■■■□□ 2.06
ACACA-236ENST00000615229 LRP10Q7Z4F1 713 aa27.9■■■□□ 2.06
ACACA-236ENST00000615229 FLAD1Q8NFF5 587 aa27.9■■■□□ 2.06
ACACA-236ENST00000615229 VAMP4O75379 141 aa27.89■■■□□ 2.06
ACACA-236ENST00000615229 SRP68Q9UHB9 627 aaKnown RBP27.89■■■□□ 2.06
ACACA-236ENST00000615229 TCERG1O14776 1098 aaKnown RBP27.89■■■□□ 2.05
ACACA-236ENST00000615229 ARFGEF2Q9Y6D5 1785 aa27.88■■■□□ 2.05
ACACA-236ENST00000615229 ZBTB7AO95365 584 aa27.87■■■□□ 2.05
ACACA-236ENST00000615229 RFC4P35249 363 aa27.87■■■□□ 2.05
ACACA-236ENST00000615229 DDX21Q9NR30 783 aaKnown RBP eCLIP27.87■■■□□ 2.05
ACACA-236ENST00000615229 ANKRD36CQ5JPF3 1778 aa27.87■■■□□ 2.05
ACACA-236ENST00000615229 USP42Q9H9J4 1324 aaKnown RBP27.86■■■□□ 2.05
ACACA-236ENST00000615229 TBC1D2BQ9UPU7 963 aa27.86■■■□□ 2.05
ACACA-236ENST00000615229 MSL1Q68DK7 614 aa27.85■■■□□ 2.05
ACACA-236ENST00000615229 CCDC30Q5VVM6 783 aa27.84■■■□□ 2.05
ACACA-236ENST00000615229 TTLL7Q6ZT98 887 aa27.84■■■□□ 2.05
ACACA-236ENST00000615229 DBF4Q9UBU7 674 aaPredicted RBP27.84■■■□□ 2.05
ACACA-236ENST00000615229 USPL1Q5W0Q7 1092 aa27.83■■■□□ 2.05
ACACA-236ENST00000615229 DZIP3Q86Y13 1208 aaKnown RBP27.83■■■□□ 2.05
ACACA-236ENST00000615229 NARFQ9UHQ1 456 aa27.83■■■□□ 2.05
ACACA-236ENST00000615229 AFDNP55196 1824 aaKnown RBP27.83■■■□□ 2.05
ACACA-236ENST00000615229 A0A087WZG4 1122 aa27.83■■■□□ 2.04
ACACA-236ENST00000615229 GYS1P13807 737 aa27.83■■■□□ 2.04
ACACA-236ENST00000615229 ARXQ96QS3 562 aa27.83■■■□□ 2.04
ACACA-236ENST00000615229 BCL2L12Q9HB09 334 aa27.82■■■□□ 2.04
ACACA-236ENST00000615229 CAMTA2O94983 1202 aa27.81■■■□□ 2.04
ACACA-236ENST00000615229 NPM2Q86SE8 214 aaKnown RBP27.81■■■□□ 2.04
ACACA-236ENST00000615229 SLC16A10Q8TF71 515 aa27.81■■■□□ 2.04
ACACA-236ENST00000615229 XAGE3Q8WTP9 111 aa27.81■■■□□ 2.04
ACACA-236ENST00000615229 ATF5Q9Y2D1 282 aaPredicted RBP27.81■■■□□ 2.04
ACACA-236ENST00000615229 LRP5O75197 1615 aa27.8■■■□□ 2.04
ACACA-236ENST00000615229 ZPR1O75312 459 aa27.8■■■□□ 2.04
ACACA-236ENST00000615229 MTFR1LQ9H019 292 aa27.8■■■□□ 2.04
ACACA-236ENST00000615229 PHAXQ9H814 394 aaKnown RBP27.8■■■□□ 2.04
ACACA-236ENST00000615229 AIMP1Q12904 312 aaKnown RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms