RNA–Protein interactions for RNA: ENST00000614014.1

PRICKLE3-208, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 3

Gene PRICKLE3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-208ENST00000614014 SPINK5Q9NQ38 1064 aaPredicted RBP25.74■■□□□ 1.71
PRICKLE3-208ENST00000614014 TUBGCP6Q96RT7 1819 aa25.74■■□□□ 1.71
PRICKLE3-208ENST00000614014 GNPATO15228 680 aa25.73■■□□□ 1.71
PRICKLE3-208ENST00000614014 STARD3NLO95772 234 aa25.73■■□□□ 1.71
PRICKLE3-208ENST00000614014 KRT24Q2M2I5 525 aa25.73■■□□□ 1.71
PRICKLE3-208ENST00000614014 SMIM5Q71RC9 77 aa25.73■■□□□ 1.71
PRICKLE3-208ENST00000614014 CCDC87Q9NVE4 849 aa25.73■■□□□ 1.71
PRICKLE3-208ENST00000614014 QSER1Q2KHR3 1735 aa25.72■■□□□ 1.71
PRICKLE3-208ENST00000614014 RPS6KA4O75676 772 aa25.72■■□□□ 1.71
PRICKLE3-208ENST00000614014 UBR3Q6ZT12 1888 aa25.72■■□□□ 1.71
PRICKLE3-208ENST00000614014 ZBTB1Q9Y2K1 713 aa25.71■■□□□ 1.71
PRICKLE3-208ENST00000614014 SSFA2P28290 1259 aa25.7■■□□□ 1.7
PRICKLE3-208ENST00000614014 COL23A1Q86Y22 540 aaPredicted RBP25.7■■□□□ 1.7
PRICKLE3-208ENST00000614014 TSR2Q969E8 191 aaKnown RBP25.7■■□□□ 1.7
PRICKLE3-208ENST00000614014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.69■■□□□ 1.7
PRICKLE3-208ENST00000614014 A1BGP04217 495 aa25.69■■□□□ 1.7
PRICKLE3-208ENST00000614014 RTCBQ9Y3I0 505 aaKnown RBP25.69■■□□□ 1.7
PRICKLE3-208ENST00000614014 CASZ1Q86V15 1759 aa25.69■■□□□ 1.7
PRICKLE3-208ENST00000614014 SOS1Q07889 1333 aaPredicted RBP25.67■■□□□ 1.7
PRICKLE3-208ENST00000614014 PHF14O94880 888 aa25.67■■□□□ 1.7
PRICKLE3-208ENST00000614014 FLAD1Q8NFF5 587 aa25.67■■□□□ 1.7
PRICKLE3-208ENST00000614014 FANCIQ9NVI1 1328 aa25.66■■□□□ 1.7
PRICKLE3-208ENST00000614014 LAMB4A4D0S4 1761 aa25.66■■□□□ 1.7
PRICKLE3-208ENST00000614014 NBPF26B4DH59 902 aa25.65■■□□□ 1.7
PRICKLE3-208ENST00000614014 CANXP27824 592 aaKnown RBP25.65■■□□□ 1.7
PRICKLE3-208ENST00000614014 NBPF10Q6P3W6 841 aaKnown RBP25.65■■□□□ 1.7
PRICKLE3-208ENST00000614014 NBPF15Q8N660 670 aa25.65■■□□□ 1.7
PRICKLE3-208ENST00000614014 C8orf58Q8NAV2 365 aa25.65■■□□□ 1.7
PRICKLE3-208ENST00000614014 HOXB7P09629 217 aa25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 ADRA2BP18089 450 aa25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 EIF5P55010 431 aaKnown RBP25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 HNRNPUQ00839 825 aaKnown RBP eCLIP25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 GOLGA2Q08379 1002 aa25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 TRAPPC3LQ5T215 181 aa25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 DUSP27Q5VZP5 1158 aa25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 ARHGEF1Q92888 912 aaKnown RBP25.64■■□□□ 1.7
PRICKLE3-208ENST00000614014 IL6STP40189 918 aaPredicted RBP25.63■■□□□ 1.69
PRICKLE3-208ENST00000614014 PIP4K2AP48426 406 aaPredicted RBP25.63■■□□□ 1.69
PRICKLE3-208ENST00000614014 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
PRICKLE3-208ENST00000614014 EIF2S2P20042 333 aaKnown RBP25.61■■□□□ 1.69
PRICKLE3-208ENST00000614014 SLFN5Q08AF3 891 aa25.61■■□□□ 1.69
PRICKLE3-208ENST00000614014 SLC16A10Q8TF71 515 aa25.61■■□□□ 1.69
PRICKLE3-208ENST00000614014 CDCA7LQ96GN5 454 aa25.61■■□□□ 1.69
PRICKLE3-208ENST00000614014 MYH16Q9H6N6 1097 aa25.61■■□□□ 1.69
PRICKLE3-208ENST00000614014 COL15A1P39059 1388 aa25.6■■□□□ 1.69
PRICKLE3-208ENST00000614014 ELL2O00472 640 aaPredicted RBP25.6■■□□□ 1.69
PRICKLE3-208ENST00000614014 PDIA6Q15084 440 aa25.6■■□□□ 1.69
PRICKLE3-208ENST00000614014 E9PSI1 815 aa25.59■■□□□ 1.69
PRICKLE3-208ENST00000614014 MSH5O43196 834 aa25.59■■□□□ 1.69
PRICKLE3-208ENST00000614014 ZBTB7AO95365 584 aa25.59■■□□□ 1.69
PRICKLE3-208ENST00000614014 TRMT2AQ8IZ69 625 aaKnown RBP25.59■■□□□ 1.69
PRICKLE3-208ENST00000614014 ERBB4Q15303 1308 aa25.59■■□□□ 1.69
PRICKLE3-208ENST00000614014 EXOSC9Q06265 439 aaKnown RBP25.58■■□□□ 1.69
PRICKLE3-208ENST00000614014 C4AP0C0L4 1744 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 RFC4P35249 363 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 HDGFL1Q5TGJ6 251 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 LRP10Q7Z4F1 713 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 NECTIN2Q92692 538 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 MTFR1LQ9H019 292 aa25.57■■□□□ 1.68
PRICKLE3-208ENST00000614014 PROSER3Q2NL68 480 aa25.56■■□□□ 1.68
PRICKLE3-208ENST00000614014 USP42Q9H9J4 1324 aaKnown RBP25.56■■□□□ 1.68
PRICKLE3-208ENST00000614014 TWISTNBQ3B726 338 aaPredicted RBP25.55■■□□□ 1.68
PRICKLE3-208ENST00000614014 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
PRICKLE3-208ENST00000614014 NARFQ9UHQ1 456 aa25.55■■□□□ 1.68
PRICKLE3-208ENST00000614014 A0A087WZG4 1122 aa25.54■■□□□ 1.68
PRICKLE3-208ENST00000614014 GYS1P13807 737 aa25.54■■□□□ 1.68
PRICKLE3-208ENST00000614014 ATF5Q9Y2D1 282 aaPredicted RBP25.54■■□□□ 1.68
PRICKLE3-208ENST00000614014 ZNF330Q9Y3S2 320 aaPredicted RBP25.54■■□□□ 1.68
PRICKLE3-208ENST00000614014 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
PRICKLE3-208ENST00000614014 VAMP4O75379 141 aa25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 ANXA1P04083 346 aa25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 MYL6BP14649 208 aa25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 SGIP1Q9BQI5 828 aa25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 DDX21Q9NR30 783 aaKnown RBP eCLIP25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 CHPF2Q9P2E5 772 aa25.53■■□□□ 1.68
PRICKLE3-208ENST00000614014 PTGER2P43116 358 aa25.52■■□□□ 1.68
PRICKLE3-208ENST00000614014 BCL2L12Q9HB09 334 aa25.52■■□□□ 1.68
PRICKLE3-208ENST00000614014 SPON1Q9HCB6 807 aa25.52■■□□□ 1.68
PRICKLE3-208ENST00000614014 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
PRICKLE3-208ENST00000614014 COL24A1Q17RW2 1714 aa25.51■■□□□ 1.68
PRICKLE3-208ENST00000614014 USPL1Q5W0Q7 1092 aa25.51■■□□□ 1.67
PRICKLE3-208ENST00000614014 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
PRICKLE3-208ENST00000614014 ZPR1O75312 459 aa25.5■■□□□ 1.67
PRICKLE3-208ENST00000614014 CAMTA2O94983 1202 aa25.5■■□□□ 1.67
PRICKLE3-208ENST00000614014 DZIP3Q86Y13 1208 aaKnown RBP25.5■■□□□ 1.67
PRICKLE3-208ENST00000614014 DBF4Q9UBU7 674 aaPredicted RBP25.5■■□□□ 1.67
PRICKLE3-208ENST00000614014 FKBP8Q14318 412 aa25.48■■□□□ 1.67
PRICKLE3-208ENST00000614014 CCDC30Q5VVM6 783 aa25.48■■□□□ 1.67
PRICKLE3-208ENST00000614014 TTLL7Q6ZT98 887 aa25.48■■□□□ 1.67
PRICKLE3-208ENST00000614014 NPM2Q86SE8 214 aaKnown RBP25.48■■□□□ 1.67
PRICKLE3-208ENST00000614014 NLGN1Q8N2Q7 840 aa25.48■■□□□ 1.67
PRICKLE3-208ENST00000614014 CHMP4AQ9BY43 222 aa25.47■■□□□ 1.67
PRICKLE3-208ENST00000614014 ARXQ96QS3 562 aa25.46■■□□□ 1.67
PRICKLE3-208ENST00000614014 COPS6Q7L5N1 327 aa25.45■■□□□ 1.66
PRICKLE3-208ENST00000614014 XAGE3Q8WTP9 111 aa25.45■■□□□ 1.66
PRICKLE3-208ENST00000614014 HYPKQ9NX55 129 aa25.45■■□□□ 1.66
PRICKLE3-208ENST00000614014 SCN7AQ01118 1682 aa25.45■■□□□ 1.66
PRICKLE3-208ENST00000614014 LRP5O75197 1615 aa25.45■■□□□ 1.66
PRICKLE3-208ENST00000614014 TCERG1O14776 1098 aaKnown RBP25.44■■□□□ 1.66
PRICKLE3-208ENST00000614014 MAP3K15Q6ZN16 1313 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms