RNA–Protein interactions for RNA: ENST00000613857.4

SGPL1-206, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 4

Gene SGPL1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-206ENST00000613857 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
SGPL1-206ENST00000613857 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
SGPL1-206ENST00000613857 NLGN2Q8NFZ4 835 aa16.74■□□□□ 0.27
SGPL1-206ENST00000613857 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
SGPL1-206ENST00000613857 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
SGPL1-206ENST00000613857 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
SGPL1-206ENST00000613857 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
SGPL1-206ENST00000613857 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
SGPL1-206ENST00000613857 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
SGPL1-206ENST00000613857 MMP10P09238 476 aa16.73■□□□□ 0.27
SGPL1-206ENST00000613857 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
SGPL1-206ENST00000613857 A1BGP04217 495 aa16.72■□□□□ 0.27
SGPL1-206ENST00000613857 RUNDC1Q96C34 613 aa16.72■□□□□ 0.27
SGPL1-206ENST00000613857 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
SGPL1-206ENST00000613857 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SGPL1-206ENST00000613857 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SGPL1-206ENST00000613857 COL15A1P39059 1388 aa16.7■□□□□ 0.26
SGPL1-206ENST00000613857 ANP32CO43423 234 aa16.7■□□□□ 0.26
SGPL1-206ENST00000613857 ZPR1O75312 459 aa16.7■□□□□ 0.26
SGPL1-206ENST00000613857 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
SGPL1-206ENST00000613857 FKBP8Q14318 412 aa16.7■□□□□ 0.26
SGPL1-206ENST00000613857 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
SGPL1-206ENST00000613857 EIF5P55010 431 aaKnown RBP16.69■□□□□ 0.26
SGPL1-206ENST00000613857 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
SGPL1-206ENST00000613857 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
SGPL1-206ENST00000613857 C4AP0C0L4 1744 aa16.69■□□□□ 0.26
SGPL1-206ENST00000613857 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
SGPL1-206ENST00000613857 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
SGPL1-206ENST00000613857 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
SGPL1-206ENST00000613857 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
SGPL1-206ENST00000613857 GPR162Q16538 588 aa16.67■□□□□ 0.26
SGPL1-206ENST00000613857 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
SGPL1-206ENST00000613857 TM4SF1P30408 202 aa16.66■□□□□ 0.26
SGPL1-206ENST00000613857 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
SGPL1-206ENST00000613857 EIF4A1P60842 406 aaKnown RBP16.66■□□□□ 0.26
SGPL1-206ENST00000613857 BCL2L12Q9HB09 334 aa16.66■□□□□ 0.26
SGPL1-206ENST00000613857 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
SGPL1-206ENST00000613857 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
SGPL1-206ENST00000613857 A0A087WZG4 1122 aa16.65■□□□□ 0.26
SGPL1-206ENST00000613857 APAF1O14727 1248 aa16.65■□□□□ 0.26
SGPL1-206ENST00000613857 DDR1Q08345 913 aa16.65■□□□□ 0.26
SGPL1-206ENST00000613857 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
SGPL1-206ENST00000613857 GIGYF1O75420 1035 aaPredicted RBP16.64■□□□□ 0.25
SGPL1-206ENST00000613857 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
SGPL1-206ENST00000613857 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
SGPL1-206ENST00000613857 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
SGPL1-206ENST00000613857 NFIXQ14938 502 aa16.63■□□□□ 0.25
SGPL1-206ENST00000613857 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
SGPL1-206ENST00000613857 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
SGPL1-206ENST00000613857 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
SGPL1-206ENST00000613857 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
SGPL1-206ENST00000613857 KDM3BQ7LBC6 1761 aa16.63■□□□□ 0.25
SGPL1-206ENST00000613857 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
SGPL1-206ENST00000613857 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
SGPL1-206ENST00000613857 BICDL1Q6ZP65 573 aa16.62■□□□□ 0.25
SGPL1-206ENST00000613857 SENP3-EIF4A1A0A087X0R7 540 aa16.61■□□□□ 0.25
SGPL1-206ENST00000613857 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
SGPL1-206ENST00000613857 A0A0G2JLW4 131 aa16.6■□□□□ 0.25
SGPL1-206ENST00000613857 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
SGPL1-206ENST00000613857 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
SGPL1-206ENST00000613857 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
SGPL1-206ENST00000613857 CHL1O00533 1208 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 SERPINB2P05120 415 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 YY1P25490 414 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 TGFB2P61812 414 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
SGPL1-206ENST00000613857 DPEP1P16444 411 aa16.58■□□□□ 0.24
SGPL1-206ENST00000613857 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
SGPL1-206ENST00000613857 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
SGPL1-206ENST00000613857 MYL6BP14649 208 aa16.57■□□□□ 0.24
SGPL1-206ENST00000613857 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
SGPL1-206ENST00000613857 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
SGPL1-206ENST00000613857 KIF13BQ9NQT8 1826 aa16.55■□□□□ 0.24
SGPL1-206ENST00000613857 KCNA3P22001 575 aa16.55■□□□□ 0.24
SGPL1-206ENST00000613857 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
SGPL1-206ENST00000613857 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
SGPL1-206ENST00000613857 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
SGPL1-206ENST00000613857 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
SGPL1-206ENST00000613857 CHRNA5P30532 468 aa16.54■□□□□ 0.24
SGPL1-206ENST00000613857 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
SGPL1-206ENST00000613857 CCDC24Q8N4L8 307 aa16.54■□□□□ 0.24
SGPL1-206ENST00000613857 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
SGPL1-206ENST00000613857 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 ANXA1P04083 346 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 PDIA6Q15084 440 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 HLFQ16534 295 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 KIAA1551Q9HCM1 1747 aa16.53■□□□□ 0.24
SGPL1-206ENST00000613857 AFDNP55196 1824 aaKnown RBP16.52■□□□□ 0.23
SGPL1-206ENST00000613857 ERBB4Q15303 1308 aa16.51■□□□□ 0.23
SGPL1-206ENST00000613857 GNAI1P63096 354 aa16.51■□□□□ 0.23
SGPL1-206ENST00000613857 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
SGPL1-206ENST00000613857 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
SGPL1-206ENST00000613857 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
SGPL1-206ENST00000613857 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms