RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 AK7Q96M32 723 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 CEP350Q5VT06 3117 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 SLC15A2Q16348 729 aa16.83■□□□□ 0.28
SRGAP2C-204ENST00000613462 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 E9PSI1 815 aa16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 TFCP2L1Q9NZI6 479 aa16.82■□□□□ 0.28
SRGAP2C-204ENST00000613462 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
SRGAP2C-204ENST00000613462 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
SRGAP2C-204ENST00000613462 ZNF827Q17R98 1081 aa16.81■□□□□ 0.28
SRGAP2C-204ENST00000613462 FLAD1Q8NFF5 587 aa16.81■□□□□ 0.28
SRGAP2C-204ENST00000613462 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
SRGAP2C-204ENST00000613462 GNPATO15228 680 aa16.8■□□□□ 0.28
SRGAP2C-204ENST00000613462 ADRA2BP18089 450 aa16.8■□□□□ 0.28
SRGAP2C-204ENST00000613462 SSFA2P28290 1259 aa16.8■□□□□ 0.28
SRGAP2C-204ENST00000613462 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
SRGAP2C-204ENST00000613462 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
SRGAP2C-204ENST00000613462 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
SRGAP2C-204ENST00000613462 BCORQ6W2J9 1755 aa16.79■□□□□ 0.28
SRGAP2C-204ENST00000613462 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
SRGAP2C-204ENST00000613462 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
SRGAP2C-204ENST00000613462 INTS5Q6P9B9 1019 aaKnown RBP16.78■□□□□ 0.28
SRGAP2C-204ENST00000613462 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
SRGAP2C-204ENST00000613462 CHD4Q14839 1912 aa16.78■□□□□ 0.28
SRGAP2C-204ENST00000613462 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
SRGAP2C-204ENST00000613462 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
SRGAP2C-204ENST00000613462 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.28
SRGAP2C-204ENST00000613462 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
SRGAP2C-204ENST00000613462 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 COL15A1P39059 1388 aa16.76■□□□□ 0.27
SRGAP2C-204ENST00000613462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
SRGAP2C-204ENST00000613462 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
SRGAP2C-204ENST00000613462 TRAPPC3LQ5T215 181 aa16.75■□□□□ 0.27
SRGAP2C-204ENST00000613462 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
SRGAP2C-204ENST00000613462 A0A087WZG4 1122 aa16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 A1BGP04217 495 aa16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
SRGAP2C-204ENST00000613462 NUP98P52948 1817 aa16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 PHF14O94880 888 aa16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 EXOSC9Q06265 439 aaKnown RBP16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 ZNF784Q8NCA9 323 aaPredicted RBP16.73■□□□□ 0.27
SRGAP2C-204ENST00000613462 RFC4P35249 363 aa16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 COL23A1Q86Y22 540 aaPredicted RBP16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
SRGAP2C-204ENST00000613462 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
SRGAP2C-204ENST00000613462 ARFGEF2Q9Y6D5 1785 aa16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 MSH5O43196 834 aa16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 ARHGEF1Q92888 912 aaKnown RBP16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 PPP1R1BQ9UD71 204 aaPredicted RBP16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
SRGAP2C-204ENST00000613462 RGL2O15211 777 aa16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 ZPR1O75312 459 aa16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 MTFR1LQ9H019 292 aa16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
SRGAP2C-204ENST00000613462 VAMP4O75379 141 aa16.68■□□□□ 0.26
SRGAP2C-204ENST00000613462 PTGER2P43116 358 aa16.68■□□□□ 0.26
SRGAP2C-204ENST00000613462 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
SRGAP2C-204ENST00000613462 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
SRGAP2C-204ENST00000613462 MYL6BP14649 208 aa16.67■□□□□ 0.26
SRGAP2C-204ENST00000613462 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
SRGAP2C-204ENST00000613462 PDIA6Q15084 440 aa16.67■□□□□ 0.26
SRGAP2C-204ENST00000613462 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
SRGAP2C-204ENST00000613462 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
SRGAP2C-204ENST00000613462 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
SRGAP2C-204ENST00000613462 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
SRGAP2C-204ENST00000613462 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms