RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 ACEP12821 1306 aa16.9■□□□□ 0.3
HOXA3-207ENST00000612286 NRXN1Q9ULB1 1477 aa16.9■□□□□ 0.3
HOXA3-207ENST00000612286 TRIM5Q9C035 493 aa16.89■□□□□ 0.3
HOXA3-207ENST00000612286 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.3
HOXA3-207ENST00000612286 HS1BP3Q53T59 392 aa16.89■□□□□ 0.29
HOXA3-207ENST00000612286 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
HOXA3-207ENST00000612286 YEATS2Q9ULM3 1422 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 CCDC186Q7Z3E2 898 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 GNAI3P08754 354 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 NLRP6P59044 892 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
HOXA3-207ENST00000612286 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
HOXA3-207ENST00000612286 EDC3Q96F86 508 aaKnown RBP16.88■□□□□ 0.29
HOXA3-207ENST00000612286 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
HOXA3-207ENST00000612286 TCHHQ07283 1943 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 LIG1P18858 919 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 FGD1P98174 961 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 USP44Q9H0E7 712 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 KCNQ3O43525 872 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 F13A1P00488 732 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 TRMT1Q9NXH9 659 aaKnown RBP16.87■□□□□ 0.29
HOXA3-207ENST00000612286 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 MYO3AQ8NEV4 1616 aa16.87■□□□□ 0.29
HOXA3-207ENST00000612286 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 CHGBP05060 677 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 EYA1Q99502 592 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 PTPRCP08575 1304 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
HOXA3-207ENST00000612286 MCM2P49736 904 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
HOXA3-207ENST00000612286 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
HOXA3-207ENST00000612286 CCDC94Q9BW85 323 aaPredicted RBP16.86■□□□□ 0.29
HOXA3-207ENST00000612286 TERF1P54274 439 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 CUL4AQ13619 759 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
HOXA3-207ENST00000612286 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 LIMCH1Q9UPQ0 1083 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 HSP90B1P14625 803 aaKnown RBP16.85■□□□□ 0.29
HOXA3-207ENST00000612286 CDC37L1Q7L3B6 337 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 ZNF771Q7L3S4 317 aaPredicted RBP16.85■□□□□ 0.29
HOXA3-207ENST00000612286 KCNF1Q9H3M0 494 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 GUCY1B3Q02153 619 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
HOXA3-207ENST00000612286 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
HOXA3-207ENST00000612286 METP08581 1390 aa16.84■□□□□ 0.29
HOXA3-207ENST00000612286 ARID5BQ14865 1188 aa16.84■□□□□ 0.29
HOXA3-207ENST00000612286 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
HOXA3-207ENST00000612286 UBE2HP62256 183 aa16.84■□□□□ 0.29
HOXA3-207ENST00000612286 TRERF1Q96PN7 1200 aa16.84■□□□□ 0.29
HOXA3-207ENST00000612286 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 PTPRMP28827 1452 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 RAB11FIP3O75154 756 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 ANO6Q4KMQ2 910 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 CNTROBQ8N137 903 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 CHPF2Q9P2E5 772 aa16.83■□□□□ 0.29
HOXA3-207ENST00000612286 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
HOXA3-207ENST00000612286 DEPDC5O75140 1603 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
HOXA3-207ENST00000612286 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
HOXA3-207ENST00000612286 DNAJC25Q9H1X3 360 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 KIDINS220Q9ULH0 1771 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 RGS12O14924 1447 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.28
HOXA3-207ENST00000612286 AACSQ86V21 672 aa16.83■□□□□ 0.28
HOXA3-207ENST00000612286 INO80Q9ULG1 1556 aaPredicted RBP16.83■□□□□ 0.28
HOXA3-207ENST00000612286 ME3Q16798 604 aa16.82■□□□□ 0.28
HOXA3-207ENST00000612286 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-207ENST00000612286 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
HOXA3-207ENST00000612286 HSPA4P34932 840 aa16.82■□□□□ 0.28
HOXA3-207ENST00000612286 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
HOXA3-207ENST00000612286 MCM5P33992 734 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-207ENST00000612286 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-207ENST00000612286 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 TTC6Q86TZ1 520 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.28
HOXA3-207ENST00000612286 SGSM2O43147 1006 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 NUP62CLQ9H1M0 184 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
HOXA3-207ENST00000612286 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
HOXA3-207ENST00000612286 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
HOXA3-207ENST00000612286 CCDC192P0DO97 292 aa16.8■□□□□ 0.28
HOXA3-207ENST00000612286 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 243.1 ms