RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RFC4P35249 363 aa34.23■■■■□ 3.07
VEGFA-226ENST00000611736 ZBTB1Q9Y2K1 713 aa34.23■■■■□ 3.07
VEGFA-226ENST00000611736 FHDC1Q9C0D6 1143 aaPredicted RBP34.22■■■■□ 3.07
VEGFA-226ENST00000611736 C4AP0C0L4 1744 aa34.21■■■■□ 3.07
VEGFA-226ENST00000611736 PNISRQ8TF01 805 aaKnown RBP34.21■■■■□ 3.07
VEGFA-226ENST00000611736 TEX13AQ9BXU3 409 aaPredicted RBP34.21■■■■□ 3.07
VEGFA-226ENST00000611736 SOS1Q07889 1333 aaPredicted RBP34.2■■■■□ 3.07
VEGFA-226ENST00000611736 KDM3BQ7LBC6 1761 aa34.19■■■■□ 3.06
VEGFA-226ENST00000611736 KLHL34Q8N239 644 aa34.19■■■■□ 3.06
VEGFA-226ENST00000611736 CANXP27824 592 aaKnown RBP34.18■■■■□ 3.06
VEGFA-226ENST00000611736 PRAMEF22A3QJZ6 481 aa34.17■■■■□ 3.06
VEGFA-226ENST00000611736 TRIM35Q9UPQ4 493 aa34.17■■■■□ 3.06
VEGFA-226ENST00000611736 APAF1O14727 1248 aa34.16■■■■□ 3.06
VEGFA-226ENST00000611736 SNRPA1P09661 255 aaKnown RBP34.16■■■■□ 3.06
VEGFA-226ENST00000611736 SRP68Q9UHB9 627 aaKnown RBP34.16■■■■□ 3.06
VEGFA-226ENST00000611736 COL15A1P39059 1388 aa34.14■■■■□ 3.06
VEGFA-226ENST00000611736 SYT17Q9BSW7 474 aa34.14■■■■□ 3.06
VEGFA-226ENST00000611736 TSPYL4Q9UJ04 414 aa34.14■■■■□ 3.06
VEGFA-226ENST00000611736 USP16Q9Y5T5 823 aa34.14■■■■□ 3.06
VEGFA-226ENST00000611736 DCAF8L1A6NGE4 600 aa34.13■■■■□ 3.05
VEGFA-226ENST00000611736 GYS1P13807 737 aa34.13■■■■□ 3.05
VEGFA-226ENST00000611736 USP42Q9H9J4 1324 aaKnown RBP34.12■■■■□ 3.05
VEGFA-226ENST00000611736 A1BGP04217 495 aa34.12■■■■□ 3.05
VEGFA-226ENST00000611736 EIF4A1P60842 406 aaKnown RBP34.1■■■■□ 3.05
VEGFA-226ENST00000611736 NLGN1Q8N2Q7 840 aa34.1■■■■□ 3.05
VEGFA-226ENST00000611736 ZNF330Q9Y3S2 320 aaPredicted RBP34.1■■■■□ 3.05
VEGFA-226ENST00000611736 ZPR1O75312 459 aa34.09■■■■□ 3.05
VEGFA-226ENST00000611736 MMP10P09238 476 aa34.09■■■■□ 3.05
VEGFA-226ENST00000611736 EIF5P55010 431 aaKnown RBP34.08■■■■□ 3.05
VEGFA-226ENST00000611736 PIP4K2AP48426 406 aaPredicted RBP34.07■■■■□ 3.04
VEGFA-226ENST00000611736 USPL1Q5W0Q7 1092 aa34.07■■■■□ 3.04
VEGFA-226ENST00000611736 LAS1LQ9Y4W2 734 aaKnown RBP34.07■■■■□ 3.04
VEGFA-226ENST00000611736 SENP3-EIF4A1A0A087X0R7 540 aa34.06■■■■□ 3.04
VEGFA-226ENST00000611736 FKBP8Q14318 412 aa34.06■■■■□ 3.04
VEGFA-226ENST00000611736 BABAM1Q9NWV8 329 aa34.06■■■■□ 3.04
VEGFA-226ENST00000611736 NARFQ9UHQ1 456 aa34.06■■■■□ 3.04
VEGFA-226ENST00000611736 GIGYF1O75420 1035 aaPredicted RBP34.05■■■■□ 3.04
VEGFA-226ENST00000611736 IL6STP40189 918 aaPredicted RBP34.05■■■■□ 3.04
VEGFA-226ENST00000611736 LAMB4A4D0S4 1761 aa34.05■■■■□ 3.04
VEGFA-226ENST00000611736 A0A087WZG4 1122 aa34.03■■■■□ 3.04
VEGFA-226ENST00000611736 NPM2Q86SE8 214 aaKnown RBP34.02■■■■□ 3.04
VEGFA-226ENST00000611736 NLGN2Q8NFZ4 835 aa34.02■■■■□ 3.04
VEGFA-226ENST00000611736 CHL1O00533 1208 aa34■■■■□ 3.03
VEGFA-226ENST00000611736 TBC1D2BQ9UPU7 963 aa34■■■■□ 3.03
VEGFA-226ENST00000611736 FAM9BQ8IZU0 186 aa33.99■■■■□ 3.03
VEGFA-226ENST00000611736 PARP3Q9Y6F1 533 aa33.99■■■■□ 3.03
VEGFA-226ENST00000611736 NBPF26B4DH59 902 aa33.98■■■■□ 3.03
VEGFA-226ENST00000611736 NBPF10Q6P3W6 841 aaKnown RBP33.98■■■■□ 3.03
VEGFA-226ENST00000611736 NBPF15Q8N660 670 aa33.98■■■■□ 3.03
VEGFA-226ENST00000611736 CD2APQ9Y5K6 639 aa33.98■■■■□ 3.03
VEGFA-226ENST00000611736 BCL2L12Q9HB09 334 aa33.97■■■■□ 3.03
VEGFA-226ENST00000611736 GOLGB1Q14789 3259 aaKnown RBP33.97■■■■□ 3.03
VEGFA-226ENST00000611736 DDR1Q08345 913 aa33.95■■■■□ 3.03
VEGFA-226ENST00000611736 CFAP44Q96MT7 982 aa33.95■■■■□ 3.03
VEGFA-226ENST00000611736 SCN7AQ01118 1682 aa33.94■■■■□ 3.02
VEGFA-226ENST00000611736 CALD1Q05682 793 aaKnown RBP33.94■■■■□ 3.02
VEGFA-226ENST00000611736 DZIP3Q86Y13 1208 aaKnown RBP33.93■■■■□ 3.02
VEGFA-226ENST00000611736 TM4SF1P30408 202 aa33.92■■■■□ 3.02
VEGFA-226ENST00000611736 NFIXQ14938 502 aa33.92■■■■□ 3.02
VEGFA-226ENST00000611736 KRT24Q2M2I5 525 aa33.92■■■■□ 3.02
VEGFA-226ENST00000611736 EIF2S2P20042 333 aaKnown RBP33.91■■■■□ 3.02
VEGFA-226ENST00000611736 MBIPQ9NS73 344 aa33.91■■■■□ 3.02
VEGFA-226ENST00000611736 UTRNP46939 3433 aa33.91■■■■□ 3.02
VEGFA-226ENST00000611736 POLRMTO00411 1230 aaKnown RBP33.9■■■■□ 3.02
VEGFA-226ENST00000611736 CAMTA2O94983 1202 aa33.9■■■■□ 3.02
VEGFA-226ENST00000611736 IFT57Q9NWB7 429 aa33.9■■■■□ 3.02
VEGFA-226ENST00000611736 ZNF853P0CG23 659 aa33.89■■■■□ 3.02
VEGFA-226ENST00000611736 BICDL1Q6ZP65 573 aa33.89■■■■□ 3.02
VEGFA-226ENST00000611736 NGEFQ8N5V2 710 aa33.89■■■■□ 3.02
VEGFA-226ENST00000611736 BCORQ6W2J9 1755 aa33.88■■■■□ 3.01
VEGFA-226ENST00000611736 MYL6BP14649 208 aa33.88■■■■□ 3.01
VEGFA-226ENST00000611736 GNAI1P63096 354 aa33.88■■■■□ 3.01
VEGFA-226ENST00000611736 CCDC27Q2M243 656 aa33.88■■■■□ 3.01
VEGFA-226ENST00000611736 PELP1Q8IZL8 1130 aaKnown RBP33.88■■■■□ 3.01
VEGFA-226ENST00000611736 SALL2Q9Y467 1007 aaPredicted RBP33.88■■■■□ 3.01
VEGFA-226ENST00000611736 C10orf71Q711Q0 1435 aa33.87■■■■□ 3.01
VEGFA-226ENST00000611736 KIF13BQ9NQT8 1826 aa33.86■■■■□ 3.01
VEGFA-226ENST00000611736 TBC1D9BQ66K14 1250 aa33.86■■■■□ 3.01
VEGFA-226ENST00000611736 WWC1Q8IX03 1113 aa33.86■■■■□ 3.01
VEGFA-226ENST00000611736 NECTIN2Q92692 538 aa33.86■■■■□ 3.01
VEGFA-226ENST00000611736 YY1P25490 414 aa33.85■■■■□ 3.01
VEGFA-226ENST00000611736 GPR162Q16538 588 aa33.85■■■■□ 3.01
VEGFA-226ENST00000611736 ERBB4Q15303 1308 aa33.84■■■■□ 3.01
VEGFA-226ENST00000611736 AFDNP55196 1824 aaKnown RBP33.84■■■■□ 3.01
VEGFA-226ENST00000611736 SERPINB2P05120 415 aa33.81■■■■□ 3
VEGFA-226ENST00000611736 WWC3Q9ULE0 1092 aa33.81■■■■□ 3
VEGFA-226ENST00000611736 ANXA1P04083 346 aa33.8■■■■□ 3
VEGFA-226ENST00000611736 NCBP3Q53F19 620 aaKnown RBP33.8■■■■□ 3
VEGFA-226ENST00000611736 DUSP27Q5VZP5 1158 aa33.8■■■■□ 3
VEGFA-226ENST00000611736 DIEXFQ68CQ4 756 aaKnown RBP33.8■■■■□ 3
VEGFA-226ENST00000611736 ZNF652Q9Y2D9 606 aa33.8■■■■□ 3
VEGFA-226ENST00000611736 PDIA6Q15084 440 aa33.79■■■■□ 3
VEGFA-226ENST00000611736 PROSER3Q2NL68 480 aa33.79■■■■□ 3
VEGFA-226ENST00000611736 TTLL7Q6ZT98 887 aa33.79■■■■□ 3
VEGFA-226ENST00000611736 PXDNLA1KZ92 1463 aa33.79■■■■□ 3
VEGFA-226ENST00000611736 N4BP2Q86UW6 1770 aaPredicted RBP33.79■■■■□ 3
VEGFA-226ENST00000611736 CCER2I3L3R5 266 aa33.78■■■■□ 3
VEGFA-226ENST00000611736 HOXB7P09629 217 aa33.78■■■■□ 3
VEGFA-226ENST00000611736 CLEC4GQ6UXB4 293 aa33.78■■■■□ 3
VEGFA-226ENST00000611736 KIF6Q6ZMV9 814 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms