RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 KIF3CO14782 793 aa13.93□□□□□ -0.18
SCNM1-207ENST00000602841 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
SCNM1-207ENST00000602841 ADCY9O60503 1353 aa13.93□□□□□ -0.18
SCNM1-207ENST00000602841 ELL2O00472 640 aaPredicted RBP13.92□□□□□ -0.18
SCNM1-207ENST00000602841 PLIN1O60240 522 aa13.92□□□□□ -0.18
SCNM1-207ENST00000602841 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
SCNM1-207ENST00000602841 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
SCNM1-207ENST00000602841 TNNQ9UQP3 1299 aa13.92□□□□□ -0.18
SCNM1-207ENST00000602841 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
SCNM1-207ENST00000602841 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 TEFQ10587 303 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 DDB1Q16531 1140 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 ALDH1L2Q3SY69 923 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 C20orf194Q5TEA3 1177 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
SCNM1-207ENST00000602841 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
SCNM1-207ENST00000602841 BCL9O00512 1426 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 ZNF790Q6PG37 636 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 PIGBQ92521 554 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
SCNM1-207ENST00000602841 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
SCNM1-207ENST00000602841 PCNTO95613 3336 aa13.89□□□□□ -0.19
SCNM1-207ENST00000602841 JMYQ8N9B5 988 aa13.88□□□□□ -0.19
SCNM1-207ENST00000602841 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-207ENST00000602841 PAPPAQ13219 1627 aa13.88□□□□□ -0.19
SCNM1-207ENST00000602841 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
SCNM1-207ENST00000602841 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
SCNM1-207ENST00000602841 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
SCNM1-207ENST00000602841 POLD1P28340 1107 aa13.87□□□□□ -0.19
SCNM1-207ENST00000602841 CABP4P57796 275 aa13.87□□□□□ -0.19
SCNM1-207ENST00000602841 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
SCNM1-207ENST00000602841 PDIA6Q15084 440 aa13.87□□□□□ -0.19
SCNM1-207ENST00000602841 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
SCNM1-207ENST00000602841 HOXB7P09629 217 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 RLBP1P12271 317 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
SCNM1-207ENST00000602841 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
SCNM1-207ENST00000602841 G2E3Q7L622 706 aa13.85□□□□□ -0.19
SCNM1-207ENST00000602841 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
SCNM1-207ENST00000602841 NOB1Q9ULX3 412 aaKnown RBP13.85□□□□□ -0.19
SCNM1-207ENST00000602841 UBR2Q8IWV8 1755 aa13.85□□□□□ -0.19
SCNM1-207ENST00000602841 HTRA3P83110 453 aa13.84□□□□□ -0.19
SCNM1-207ENST00000602841 FKBP8Q14318 412 aa13.84□□□□□ -0.19
SCNM1-207ENST00000602841 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
SCNM1-207ENST00000602841 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
SCNM1-207ENST00000602841 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
SCNM1-207ENST00000602841 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
SCNM1-207ENST00000602841 ITGB4P16144 1822 aa13.83□□□□□ -0.2
SCNM1-207ENST00000602841 TRIM27P14373 513 aa13.82□□□□□ -0.2
SCNM1-207ENST00000602841 PDE3AQ14432 1141 aa13.82□□□□□ -0.2
SCNM1-207ENST00000602841 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
SCNM1-207ENST00000602841 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
SCNM1-207ENST00000602841 TOMM70O94826 608 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 CRBNQ96SW2 442 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 C5P01031 1676 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
SCNM1-207ENST00000602841 SNRPA1P09661 255 aaKnown RBP13.8□□□□□ -0.2
SCNM1-207ENST00000602841 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
SCNM1-207ENST00000602841 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
SCNM1-207ENST00000602841 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SCNM1-207ENST00000602841 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
SCNM1-207ENST00000602841 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
SCNM1-207ENST00000602841 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
SCNM1-207ENST00000602841 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 NBPF26B4DH59 902 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 NBPF10Q6P3W6 841 aaKnown RBP13.79□□□□□ -0.2
SCNM1-207ENST00000602841 NBPF15Q8N660 670 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
SCNM1-207ENST00000602841 ABCC4O15439 1325 aa13.79□□□□□ -0.2
SCNM1-207ENST00000602841 ANXA1P04083 346 aa13.78□□□□□ -0.2
SCNM1-207ENST00000602841 EIF2S2P20042 333 aaKnown RBP13.78□□□□□ -0.2
SCNM1-207ENST00000602841 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
SCNM1-207ENST00000602841 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
SCNM1-207ENST00000602841 PTCD1O75127 700 aaKnown RBP13.77□□□□□ -0.21
SCNM1-207ENST00000602841 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
SCNM1-207ENST00000602841 KIF16BQ96L93 1317 aa13.77□□□□□ -0.21
SCNM1-207ENST00000602841 FLIIQ13045 1269 aa13.76□□□□□ -0.21
SCNM1-207ENST00000602841 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
SCNM1-207ENST00000602841 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
SCNM1-207ENST00000602841 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
SCNM1-207ENST00000602841 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.76□□□□□ -0.21
SCNM1-207ENST00000602841 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCNM1-207ENST00000602841 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
SCNM1-207ENST00000602841 PTPRCP08575 1304 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms