RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 AAASQ9NRG9 546 aa13.22□□□□□ -0.29
SGMS1-206ENST00000602565 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
SGMS1-206ENST00000602565 SERTM1A2A2V5 107 aa13.21□□□□□ -0.29
SGMS1-206ENST00000602565 TAS1R3Q7RTX0 852 aa13.21□□□□□ -0.29
SGMS1-206ENST00000602565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.29
SGMS1-206ENST00000602565 PRICKLE2Q7Z3G6 844 aa13.2□□□□□ -0.3
SGMS1-206ENST00000602565 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
SGMS1-206ENST00000602565 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
SGMS1-206ENST00000602565 SCNN1AP37088 669 aa13.19□□□□□ -0.3
SGMS1-206ENST00000602565 Q6ZNB5 142 aa13.19□□□□□ -0.3
SGMS1-206ENST00000602565 LYSMD3Q7Z3D4 306 aa13.19□□□□□ -0.3
SGMS1-206ENST00000602565 STAG2Q8N3U4 1231 aa13.19□□□□□ -0.3
SGMS1-206ENST00000602565 C2orf49Q9BVC5 232 aaPredicted RBP13.19□□□□□ -0.3
SGMS1-206ENST00000602565 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
SGMS1-206ENST00000602565 NOS2P35228 1153 aa13.18□□□□□ -0.3
SGMS1-206ENST00000602565 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
SGMS1-206ENST00000602565 TEAD4Q15561 434 aa13.18□□□□□ -0.3
SGMS1-206ENST00000602565 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
SGMS1-206ENST00000602565 TXNDC2Q86VQ3 553 aa13.17□□□□□ -0.3
SGMS1-206ENST00000602565 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
SGMS1-206ENST00000602565 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
SGMS1-206ENST00000602565 PARP3Q9Y6F1 533 aa13.17□□□□□ -0.3
SGMS1-206ENST00000602565 PHKA2P46019 1235 aa13.16□□□□□ -0.3
SGMS1-206ENST00000602565 C4orf17Q53FE4 359 aa13.16□□□□□ -0.3
SGMS1-206ENST00000602565 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
SGMS1-206ENST00000602565 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
SGMS1-206ENST00000602565 ABL1P00519 1130 aa13.15□□□□□ -0.3
SGMS1-206ENST00000602565 POU4F2Q12837 409 aa13.15□□□□□ -0.3
SGMS1-206ENST00000602565 ZDHHC1Q8WTX9 485 aa13.15□□□□□ -0.3
SGMS1-206ENST00000602565 EML1O00423 815 aa13.14□□□□□ -0.31
SGMS1-206ENST00000602565 SERPINB4P48594 390 aa13.14□□□□□ -0.31
SGMS1-206ENST00000602565 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
SGMS1-206ENST00000602565 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
SGMS1-206ENST00000602565 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
SGMS1-206ENST00000602565 MAN1A2O60476 641 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
SGMS1-206ENST00000602565 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-206ENST00000602565 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 RHOQP17081 205 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 SH3PXD2AQ5TCZ1 1133 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 CAPN12Q6ZSI9 719 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 ZNF295-AS1Q8N0V1 137 aa13.13□□□□□ -0.31
SGMS1-206ENST00000602565 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-206ENST00000602565 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SGMS1-206ENST00000602565 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
SGMS1-206ENST00000602565 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
SGMS1-206ENST00000602565 C16orf46Q6P387 395 aa13.11□□□□□ -0.31
SGMS1-206ENST00000602565 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
SGMS1-206ENST00000602565 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-206ENST00000602565 TIMMDC1Q9NPL8 285 aa13.11□□□□□ -0.31
SGMS1-206ENST00000602565 DNMT3LQ9UJW3 386 aa13.11□□□□□ -0.31
SGMS1-206ENST00000602565 TATP17735 454 aaPredicted RBP13.1□□□□□ -0.31
SGMS1-206ENST00000602565 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
SGMS1-206ENST00000602565 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
SGMS1-206ENST00000602565 PHACTR1Q9C0D0 580 aa13.1□□□□□ -0.31
SGMS1-206ENST00000602565 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-206ENST00000602565 TXLNAP40222 546 aa13.08□□□□□ -0.32
SGMS1-206ENST00000602565 ZDHHC3Q9NYG2 299 aa13.08□□□□□ -0.32
SGMS1-206ENST00000602565 EGFL7Q9UHF1 273 aa13.08□□□□□ -0.32
SGMS1-206ENST00000602565 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
SGMS1-206ENST00000602565 ANO2Q9NQ90 1003 aa13.07□□□□□ -0.32
SGMS1-206ENST00000602565 A0A1B0GTH6 734 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 H3BRB1 525 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 RTN1Q16799 776 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 C1orf53Q5VUE5 145 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 GLYCTKQ8IVS8 523 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
SGMS1-206ENST00000602565 TUT1Q9H6E5 874 aaKnown RBP13.06□□□□□ -0.32
SGMS1-206ENST00000602565 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-206ENST00000602565 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
SGMS1-206ENST00000602565 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
SGMS1-206ENST00000602565 SOWAHDA6NJG2 315 aa13.04□□□□□ -0.32
SGMS1-206ENST00000602565 SOBPA7XYQ1 873 aa13.04□□□□□ -0.32
SGMS1-206ENST00000602565 COX20Q5RI15 118 aa13.04□□□□□ -0.32
SGMS1-206ENST00000602565 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
SGMS1-206ENST00000602565 MYO19Q96H55 970 aa13.04□□□□□ -0.32
SGMS1-206ENST00000602565 GMPR2Q9P2T1 348 aaKnown RBP13.04□□□□□ -0.32
SGMS1-206ENST00000602565 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
SGMS1-206ENST00000602565 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
SGMS1-206ENST00000602565 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
SGMS1-206ENST00000602565 TRIM47Q96LD4 638 aa13.03□□□□□ -0.32
SGMS1-206ENST00000602565 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
SGMS1-206ENST00000602565 ICMTO60725 284 aa13.02□□□□□ -0.33
SGMS1-206ENST00000602565 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
SGMS1-206ENST00000602565 DGKZQ13574 1117 aa13.02□□□□□ -0.33
SGMS1-206ENST00000602565 HIF1AQ16665 826 aa13.02□□□□□ -0.33
SGMS1-206ENST00000602565 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-206ENST00000602565 GAS2L1Q99501 681 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-206ENST00000602565 MSX1P28360 303 aa13.01□□□□□ -0.33
SGMS1-206ENST00000602565 GPAMQ9HCL2 828 aa13.01□□□□□ -0.33
SGMS1-206ENST00000602565 NEUROD4Q9HD90 331 aa13.01□□□□□ -0.33
SGMS1-206ENST00000602565 DYRK1BQ9Y463 629 aa13.01□□□□□ -0.33
SGMS1-206ENST00000602565 C11orf91Q3C1V1 193 aa13□□□□□ -0.33
SGMS1-206ENST00000602565 PGBD3Q8N328 593 aa13□□□□□ -0.33
SGMS1-206ENST00000602565 LRFN2Q9ULH4 789 aa13□□□□□ -0.33
SGMS1-206ENST00000602565 LCE2BO14633 110 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms