RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
LINC00649-212ENST00000601471 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 KIAA1551Q9HCM1 1747 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 COL15A1P39059 1388 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 USP42Q9H9J4 1324 aaKnown RBP12.63□□□□□ -0.39
LINC00649-212ENST00000601471 MSH5O43196 834 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 GYS1P13807 737 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 RIPK4P57078 832 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
LINC00649-212ENST00000601471 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 THUMPD2Q9BTF0 503 aaKnown RBP12.63□□□□□ -0.39
LINC00649-212ENST00000601471 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
LINC00649-212ENST00000601471 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
LINC00649-212ENST00000601471 STARD3NLO95772 234 aa12.62□□□□□ -0.39
LINC00649-212ENST00000601471 EIF5P55010 431 aaKnown RBP12.62□□□□□ -0.39
LINC00649-212ENST00000601471 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
LINC00649-212ENST00000601471 RFC4P35249 363 aa12.61□□□□□ -0.39
LINC00649-212ENST00000601471 NLGN1Q8N2Q7 840 aa12.61□□□□□ -0.39
LINC00649-212ENST00000601471 C10orf71Q711Q0 1435 aa12.61□□□□□ -0.39
LINC00649-212ENST00000601471 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
LINC00649-212ENST00000601471 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
LINC00649-212ENST00000601471 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
LINC00649-212ENST00000601471 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
LINC00649-212ENST00000601471 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
LINC00649-212ENST00000601471 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
LINC00649-212ENST00000601471 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
LINC00649-212ENST00000601471 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
LINC00649-212ENST00000601471 CD2APQ9Y5K6 639 aa12.59□□□□□ -0.39
LINC00649-212ENST00000601471 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
LINC00649-212ENST00000601471 CHL1O00533 1208 aa12.58□□□□□ -0.4
LINC00649-212ENST00000601471 MMP10P09238 476 aa12.58□□□□□ -0.4
LINC00649-212ENST00000601471 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
LINC00649-212ENST00000601471 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
LINC00649-212ENST00000601471 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
LINC00649-212ENST00000601471 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
LINC00649-212ENST00000601471 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
LINC00649-212ENST00000601471 APAF1O14727 1248 aa12.57□□□□□ -0.4
LINC00649-212ENST00000601471 A1BGP04217 495 aa12.57□□□□□ -0.4
LINC00649-212ENST00000601471 CANXP27824 592 aaKnown RBP12.57□□□□□ -0.4
LINC00649-212ENST00000601471 FKBP8Q14318 412 aa12.57□□□□□ -0.4
LINC00649-212ENST00000601471 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
LINC00649-212ENST00000601471 A0A087WZG4 1122 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 RGL2O15211 777 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 TM4SF1P30408 202 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 DDR1Q08345 913 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
LINC00649-212ENST00000601471 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
LINC00649-212ENST00000601471 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
LINC00649-212ENST00000601471 ZPR1O75312 459 aa12.55□□□□□ -0.4
LINC00649-212ENST00000601471 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
LINC00649-212ENST00000601471 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
LINC00649-212ENST00000601471 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
LINC00649-212ENST00000601471 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
LINC00649-212ENST00000601471 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
LINC00649-212ENST00000601471 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
LINC00649-212ENST00000601471 NFIXQ14938 502 aa12.53□□□□□ -0.4
LINC00649-212ENST00000601471 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
LINC00649-212ENST00000601471 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
LINC00649-212ENST00000601471 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
LINC00649-212ENST00000601471 HOXB7P09629 217 aa12.52□□□□□ -0.41
LINC00649-212ENST00000601471 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
LINC00649-212ENST00000601471 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
LINC00649-212ENST00000601471 PARP3Q9Y6F1 533 aa12.52□□□□□ -0.41
LINC00649-212ENST00000601471 ANKRD31Q8N7Z5 1873 aa12.52□□□□□ -0.41
LINC00649-212ENST00000601471 PDIA6Q15084 440 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 CLEC4GQ6UXB4 293 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
LINC00649-212ENST00000601471 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 NUP98P52948 1817 aa12.51□□□□□ -0.41
LINC00649-212ENST00000601471 TGFB2P61812 414 aa12.5□□□□□ -0.41
LINC00649-212ENST00000601471 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
LINC00649-212ENST00000601471 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
LINC00649-212ENST00000601471 ARFGEF1Q9Y6D6 1849 aa12.5□□□□□ -0.41
LINC00649-212ENST00000601471 CHD4Q14839 1912 aa12.5□□□□□ -0.41
LINC00649-212ENST00000601471 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-212ENST00000601471 IL16Q14005 1332 aa12.49□□□□□ -0.41
LINC00649-212ENST00000601471 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■□□□□ 9.6
LINC00649-212ENST00000601471 GNAI1P63096 354 aa12.49□□□□□ -0.41
LINC00649-212ENST00000601471 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
LINC00649-212ENST00000601471 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
LINC00649-212ENST00000601471 ZNF330Q9Y3S2 320 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-212ENST00000601471 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
LINC00649-212ENST00000601471 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
LINC00649-212ENST00000601471 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
LINC00649-212ENST00000601471 SERPINB2P05120 415 aa12.47□□□□□ -0.41
LINC00649-212ENST00000601471 KCNA3P22001 575 aa12.47□□□□□ -0.41
LINC00649-212ENST00000601471 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
LINC00649-212ENST00000601471 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
LINC00649-212ENST00000601471 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms