RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 C4BP0C0L5 1744 aa18.95■□□□□ 0.62
RAB11B-204ENST00000600719 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
RAB11B-204ENST00000600719 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
RAB11B-204ENST00000600719 INTS5Q6P9B9 1019 aaKnown RBP18.95■□□□□ 0.62
RAB11B-204ENST00000600719 CNTNAP4Q9C0A0 1308 aa18.95■□□□□ 0.62
RAB11B-204ENST00000600719 STARD3NLO95772 234 aa18.94■□□□□ 0.62
RAB11B-204ENST00000600719 CRKLP46109 303 aaKnown RBP18.94■□□□□ 0.62
RAB11B-204ENST00000600719 AKT1S1Q96B36 256 aa18.94■□□□□ 0.62
RAB11B-204ENST00000600719 ELL2O00472 640 aaPredicted RBP18.93■□□□□ 0.62
RAB11B-204ENST00000600719 VAMP4O75379 141 aa18.93■□□□□ 0.62
RAB11B-204ENST00000600719 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
RAB11B-204ENST00000600719 MYH14Q7Z406 1995 aaKnown RBP18.93■□□□□ 0.62
RAB11B-204ENST00000600719 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
RAB11B-204ENST00000600719 ANO8Q9HCE9 1232 aaPredicted RBP18.92■□□□□ 0.62
RAB11B-204ENST00000600719 CCDC87Q9NVE4 849 aa18.92■□□□□ 0.62
RAB11B-204ENST00000600719 A1BGP04217 495 aa18.91■□□□□ 0.62
RAB11B-204ENST00000600719 NBPF26B4DH59 902 aa18.9■□□□□ 0.62
RAB11B-204ENST00000600719 PDIA6Q15084 440 aa18.9■□□□□ 0.62
RAB11B-204ENST00000600719 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
RAB11B-204ENST00000600719 NBPF10Q6P3W6 841 aaKnown RBP18.9■□□□□ 0.62
RAB11B-204ENST00000600719 AMIGO3Q86WK7 504 aa18.9■□□□□ 0.62
RAB11B-204ENST00000600719 NBPF15Q8N660 670 aa18.9■□□□□ 0.62
RAB11B-204ENST00000600719 EIF2S2P20042 333 aaKnown RBP18.89■□□□□ 0.61
RAB11B-204ENST00000600719 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
RAB11B-204ENST00000600719 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
RAB11B-204ENST00000600719 ZBTB1Q9Y2K1 713 aa18.89■□□□□ 0.61
RAB11B-204ENST00000600719 ERBB4Q15303 1308 aa18.89■□□□□ 0.61
RAB11B-204ENST00000600719 RPS6KA4O75676 772 aa18.88■□□□□ 0.61
RAB11B-204ENST00000600719 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
RAB11B-204ENST00000600719 LRP10Q7Z4F1 713 aa18.88■□□□□ 0.61
RAB11B-204ENST00000600719 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
RAB11B-204ENST00000600719 GNPATO15228 680 aa18.87■□□□□ 0.61
RAB11B-204ENST00000600719 NECTIN2Q92692 538 aa18.87■□□□□ 0.61
RAB11B-204ENST00000600719 AK7Q96M32 723 aa18.87■□□□□ 0.61
RAB11B-204ENST00000600719 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
RAB11B-204ENST00000600719 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
RAB11B-204ENST00000600719 IL6STP40189 918 aaPredicted RBP18.86■□□□□ 0.61
RAB11B-204ENST00000600719 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
RAB11B-204ENST00000600719 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
RAB11B-204ENST00000600719 CCDC30Q5VVM6 783 aa18.86■□□□□ 0.61
RAB11B-204ENST00000600719 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
RAB11B-204ENST00000600719 STK32BQ9NY57 414 aa18.86■□□□□ 0.61
RAB11B-204ENST00000600719 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
RAB11B-204ENST00000600719 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
RAB11B-204ENST00000600719 PROSER3Q2NL68 480 aa18.85■□□□□ 0.61
RAB11B-204ENST00000600719 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
RAB11B-204ENST00000600719 ZNF428Q96B54 188 aa18.85■□□□□ 0.61
RAB11B-204ENST00000600719 DBF4Q9UBU7 674 aaPredicted RBP18.85■□□□□ 0.61
RAB11B-204ENST00000600719 RTCBQ9Y3I0 505 aaKnown RBP18.85■□□□□ 0.61
RAB11B-204ENST00000600719 QSER1Q2KHR3 1735 aa18.85■□□□□ 0.61
RAB11B-204ENST00000600719 SSFA2P28290 1259 aa18.84■□□□□ 0.61
RAB11B-204ENST00000600719 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
RAB11B-204ENST00000600719 PNPLA7Q6ZV29 1317 aa18.83■□□□□ 0.61
RAB11B-204ENST00000600719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.6
RAB11B-204ENST00000600719 ANXA1P04083 346 aa18.83■□□□□ 0.6
RAB11B-204ENST00000600719 ADRA2BP18089 450 aa18.83■□□□□ 0.6
RAB11B-204ENST00000600719 COL15A1P39059 1388 aa18.82■□□□□ 0.6
RAB11B-204ENST00000600719 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
RAB11B-204ENST00000600719 MYL6BP14649 208 aa18.82■□□□□ 0.6
RAB11B-204ENST00000600719 ARHGEF1Q92888 912 aaKnown RBP18.82■□□□□ 0.6
RAB11B-204ENST00000600719 HYPKQ9NX55 129 aa18.82■□□□□ 0.6
RAB11B-204ENST00000600719 ALDH1L2Q3SY69 923 aa18.81■□□□□ 0.6
RAB11B-204ENST00000600719 TRAPPC3LQ5T215 181 aa18.81■□□□□ 0.6
RAB11B-204ENST00000600719 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
RAB11B-204ENST00000600719 FLAD1Q8NFF5 587 aa18.81■□□□□ 0.6
RAB11B-204ENST00000600719 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
RAB11B-204ENST00000600719 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
RAB11B-204ENST00000600719 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
RAB11B-204ENST00000600719 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
RAB11B-204ENST00000600719 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
RAB11B-204ENST00000600719 PHF14O94880 888 aa18.79■□□□□ 0.6
RAB11B-204ENST00000600719 R3HDM1Q15032 1099 aaKnown RBP18.79■□□□□ 0.6
RAB11B-204ENST00000600719 A0A087WZG4 1122 aa18.78■□□□□ 0.6
RAB11B-204ENST00000600719 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
RAB11B-204ENST00000600719 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
RAB11B-204ENST00000600719 G2E3Q7L622 706 aa18.78■□□□□ 0.6
RAB11B-204ENST00000600719 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
RAB11B-204ENST00000600719 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
RAB11B-204ENST00000600719 PHAXQ9H814 394 aaKnown RBP18.78■□□□□ 0.6
RAB11B-204ENST00000600719 CACNA1FO60840 1977 aa18.77■□□□□ 0.6
RAB11B-204ENST00000600719 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
RAB11B-204ENST00000600719 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.6
RAB11B-204ENST00000600719 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
RAB11B-204ENST00000600719 ZNF330Q9Y3S2 320 aaPredicted RBP18.77■□□□□ 0.6
RAB11B-204ENST00000600719 CASZ1Q86V15 1759 aa18.77■□□□□ 0.6
RAB11B-204ENST00000600719 USP42Q9H9J4 1324 aaKnown RBP18.76■□□□□ 0.59
RAB11B-204ENST00000600719 RFC4P35249 363 aa18.76■□□□□ 0.59
RAB11B-204ENST00000600719 DZIP3Q86Y13 1208 aaKnown RBP18.76■□□□□ 0.59
RAB11B-204ENST00000600719 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
RAB11B-204ENST00000600719 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
RAB11B-204ENST00000600719 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
RAB11B-204ENST00000600719 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
RAB11B-204ENST00000600719 SRP68Q9UHB9 627 aaKnown RBP18.75■□□□□ 0.59
RAB11B-204ENST00000600719 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
RAB11B-204ENST00000600719 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
RAB11B-204ENST00000600719 ERVV-1B6SEH8 477 aa18.74■□□□□ 0.59
RAB11B-204ENST00000600719 RGL2O15211 777 aa18.74■□□□□ 0.59
RAB11B-204ENST00000600719 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
RAB11B-204ENST00000600719 FLIIQ13045 1269 aa18.74■□□□□ 0.59
RAB11B-204ENST00000600719 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms