RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
FKRP-220ENST00000600646 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 LRP5O75197 1615 aa10.03□□□□□ -0.8
FKRP-220ENST00000600646 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
FKRP-220ENST00000600646 CCDC27Q2M243 656 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 NLGN1Q8N2Q7 840 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 ARXQ96QS3 562 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 THUMPD2Q9BTF0 503 aaKnown RBP10.02□□□□□ -0.81
FKRP-220ENST00000600646 MIS18AQ9NYP9 233 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 TRIM35Q9UPQ4 493 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 TJP1Q07157 1748 aa10.02□□□□□ -0.81
FKRP-220ENST00000600646 IL6STP40189 918 aaPredicted RBP10.01□□□□□ -0.81
FKRP-220ENST00000600646 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
FKRP-220ENST00000600646 IFT57Q9NWB7 429 aa10.01□□□□□ -0.81
FKRP-220ENST00000600646 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
FKRP-220ENST00000600646 UBR3Q6ZT12 1888 aa10□□□□□ -0.81
FKRP-220ENST00000600646 CHL1O00533 1208 aa10□□□□□ -0.81
FKRP-220ENST00000600646 KCNQ3O43525 872 aa10□□□□□ -0.81
FKRP-220ENST00000600646 EIF4A1P60842 406 aaKnown RBP10□□□□□ -0.81
FKRP-220ENST00000600646 INTS5Q6P9B9 1019 aaKnown RBP10□□□□□ -0.81
FKRP-220ENST00000600646 PDGFDQ9GZP0 370 aaPredicted RBP10□□□□□ -0.81
FKRP-220ENST00000600646 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
FKRP-220ENST00000600646 KDM3BQ7LBC6 1761 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 GIGYF1O75420 1035 aaPredicted RBP9.99□□□□□ -0.81
FKRP-220ENST00000600646 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 ZBTB1Q9Y2K1 713 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 USP16Q9Y5T5 823 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 PARP3Q9Y6F1 533 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 SOS1Q07889 1333 aaPredicted RBP9.99□□□□□ -0.81
FKRP-220ENST00000600646 COL15A1P39059 1388 aa9.99□□□□□ -0.81
FKRP-220ENST00000600646 HOXB7P09629 217 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 PTGER2P43116 358 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 MSL1Q68DK7 614 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 KLHL34Q8N239 644 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 NARFQ9UHQ1 456 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
FKRP-220ENST00000600646 IL16Q14005 1332 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 ERBB4Q15303 1308 aa9.98□□□□□ -0.81
FKRP-220ENST00000600646 A1BGP04217 495 aa9.97□□□□□ -0.81
FKRP-220ENST00000600646 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
FKRP-220ENST00000600646 EIF5P55010 431 aaKnown RBP9.97□□□□□ -0.81
FKRP-220ENST00000600646 KIF6Q6ZMV9 814 aa9.97□□□□□ -0.81
FKRP-220ENST00000600646 USP42Q9H9J4 1324 aaKnown RBP9.97□□□□□ -0.81
FKRP-220ENST00000600646 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
FKRP-220ENST00000600646 NPHP1O15259 732 aa9.96□□□□□ -0.82
FKRP-220ENST00000600646 GYS1P13807 737 aa9.96□□□□□ -0.82
FKRP-220ENST00000600646 USPL1Q5W0Q7 1092 aa9.96□□□□□ -0.82
FKRP-220ENST00000600646 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
FKRP-220ENST00000600646 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
FKRP-220ENST00000600646 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
FKRP-220ENST00000600646 PRAMEF22A3QJZ6 481 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 RGL2O15211 777 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 MMP10P09238 476 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 MYL6BP14649 208 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 GOLGA2Q08379 1002 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 CLEC4GQ6UXB4 293 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 SMIM5Q71RC9 77 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 MIER1Q8N108 512 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 SGIP1Q9BQI5 828 aa9.95□□□□□ -0.82
FKRP-220ENST00000600646 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
FKRP-220ENST00000600646 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 ZNF853P0CG23 659 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 CACNB1Q02641 598 aaPredicted RBP9.94□□□□□ -0.82
FKRP-220ENST00000600646 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
FKRP-220ENST00000600646 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 SETDB2Q96T68 719 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 FHDC1Q9C0D6 1143 aaPredicted RBP9.94□□□□□ -0.82
FKRP-220ENST00000600646 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
FKRP-220ENST00000600646 SRP68Q9UHB9 627 aaKnown RBP9.94□□□□□ -0.82
FKRP-220ENST00000600646 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
FKRP-220ENST00000600646 COL24A1Q17RW2 1714 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 FKBP8Q14318 412 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 CCDC30Q5VVM6 783 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 SYT17Q9BSW7 474 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
FKRP-220ENST00000600646 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
FKRP-220ENST00000600646 ERVV-1B6SEH8 477 aa9.92□□□□□ -0.82
FKRP-220ENST00000600646 PIP4K2AP48426 406 aaPredicted RBP9.92□□□□□ -0.82
FKRP-220ENST00000600646 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
FKRP-220ENST00000600646 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
FKRP-220ENST00000600646 DDX21Q9NR30 783 aaKnown RBP eCLIP9.92□□□□□ -0.82
FKRP-220ENST00000600646 CARMIL3Q8ND23 1372 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 NBPF26B4DH59 902 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 E9PSI1 815 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 ELL2O00472 640 aaPredicted RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 TM4SF1P30408 202 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 TGFB2P61812 414 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 TWISTNBQ3B726 338 aaPredicted RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 NBPF10Q6P3W6 841 aaKnown RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms