RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 STARD3NLO95772 234 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 RIPK4P57078 832 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
C19orf54-208ENST00000598352 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
C19orf54-208ENST00000598352 MMP10P09238 476 aa16.42■□□□□ 0.22
C19orf54-208ENST00000598352 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
C19orf54-208ENST00000598352 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
C19orf54-208ENST00000598352 A1BGP04217 495 aa16.41■□□□□ 0.22
C19orf54-208ENST00000598352 FKBP8Q14318 412 aa16.41■□□□□ 0.22
C19orf54-208ENST00000598352 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
C19orf54-208ENST00000598352 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
C19orf54-208ENST00000598352 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
C19orf54-208ENST00000598352 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
C19orf54-208ENST00000598352 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
C19orf54-208ENST00000598352 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
C19orf54-208ENST00000598352 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
C19orf54-208ENST00000598352 COL15A1P39059 1388 aa16.39■□□□□ 0.21
C19orf54-208ENST00000598352 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
C19orf54-208ENST00000598352 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
C19orf54-208ENST00000598352 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
C19orf54-208ENST00000598352 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
C19orf54-208ENST00000598352 TM4SF1P30408 202 aa16.38■□□□□ 0.21
C19orf54-208ENST00000598352 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
C19orf54-208ENST00000598352 ANP32CO43423 234 aa16.37■□□□□ 0.21
C19orf54-208ENST00000598352 ZPR1O75312 459 aa16.37■□□□□ 0.21
C19orf54-208ENST00000598352 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
C19orf54-208ENST00000598352 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
C19orf54-208ENST00000598352 DDR1Q08345 913 aa16.37■□□□□ 0.21
C19orf54-208ENST00000598352 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
C19orf54-208ENST00000598352 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
C19orf54-208ENST00000598352 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
C19orf54-208ENST00000598352 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
C19orf54-208ENST00000598352 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
C19orf54-208ENST00000598352 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
C19orf54-208ENST00000598352 A0A087WZG4 1122 aa16.35■□□□□ 0.21
C19orf54-208ENST00000598352 APAF1O14727 1248 aa16.35■□□□□ 0.21
C19orf54-208ENST00000598352 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
C19orf54-208ENST00000598352 KDM3BQ7LBC6 1761 aa16.35■□□□□ 0.21
C19orf54-208ENST00000598352 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
C19orf54-208ENST00000598352 CHL1O00533 1208 aa16.34■□□□□ 0.21
C19orf54-208ENST00000598352 NFIXQ14938 502 aa16.34■□□□□ 0.21
C19orf54-208ENST00000598352 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
C19orf54-208ENST00000598352 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
C19orf54-208ENST00000598352 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.28e-7■□□□□ 8.8
C19orf54-208ENST00000598352 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
C19orf54-208ENST00000598352 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
C19orf54-208ENST00000598352 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
C19orf54-208ENST00000598352 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
C19orf54-208ENST00000598352 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
C19orf54-208ENST00000598352 GPR162Q16538 588 aa16.31■□□□□ 0.2
C19orf54-208ENST00000598352 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
C19orf54-208ENST00000598352 UTRNP46939 3433 aa16.31■□□□□ 0.2
C19orf54-208ENST00000598352 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
C19orf54-208ENST00000598352 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
C19orf54-208ENST00000598352 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
C19orf54-208ENST00000598352 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
C19orf54-208ENST00000598352 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
C19orf54-208ENST00000598352 KCNA3P22001 575 aa16.29■□□□□ 0.2
C19orf54-208ENST00000598352 TGFB2P61812 414 aa16.29■□□□□ 0.2
C19orf54-208ENST00000598352 DZIP3Q86Y13 1208 aaKnown RBP16.29■□□□□ 0.2
C19orf54-208ENST00000598352 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
C19orf54-208ENST00000598352 PDIA6Q15084 440 aa16.28■□□□□ 0.2
C19orf54-208ENST00000598352 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
C19orf54-208ENST00000598352 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
C19orf54-208ENST00000598352 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
C19orf54-208ENST00000598352 SERPINB2P05120 415 aa16.27■□□□□ 0.2
C19orf54-208ENST00000598352 DPEP1P16444 411 aa16.27■□□□□ 0.2
C19orf54-208ENST00000598352 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
C19orf54-208ENST00000598352 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
C19orf54-208ENST00000598352 RGL2O15211 777 aa16.26■□□□□ 0.19
C19orf54-208ENST00000598352 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
C19orf54-208ENST00000598352 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
C19orf54-208ENST00000598352 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
C19orf54-208ENST00000598352 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
C19orf54-208ENST00000598352 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
C19orf54-208ENST00000598352 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
C19orf54-208ENST00000598352 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
C19orf54-208ENST00000598352 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
C19orf54-208ENST00000598352 LAMB4A4D0S4 1761 aa16.25■□□□□ 0.19
C19orf54-208ENST00000598352 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 YY1P25490 414 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 HLFQ16534 295 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
C19orf54-208ENST00000598352 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
C19orf54-208ENST00000598352 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
C19orf54-208ENST00000598352 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
C19orf54-208ENST00000598352 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
C19orf54-208ENST00000598352 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
C19orf54-208ENST00000598352 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
C19orf54-208ENST00000598352 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
C19orf54-208ENST00000598352 MYL6BP14649 208 aa16.22■□□□□ 0.19
C19orf54-208ENST00000598352 CHRNA5P30532 468 aa16.22■□□□□ 0.19
C19orf54-208ENST00000598352 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
C19orf54-208ENST00000598352 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1480.1 ms