RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SOS1Q07889 1333 aaPredicted RBP27.82■■■□□ 2.04
PNKP-209ENST00000596726 ANP32CO43423 234 aa27.81■■■□□ 2.04
PNKP-209ENST00000596726 STARD3NLO95772 234 aa27.81■■■□□ 2.04
PNKP-209ENST00000596726 GYS1P13807 737 aa27.79■■■□□ 2.04
PNKP-209ENST00000596726 PNISRQ8TF01 805 aaKnown RBP27.79■■■□□ 2.04
PNKP-209ENST00000596726 MIS18AQ9NYP9 233 aa27.79■■■□□ 2.04
PNKP-209ENST00000596726 NLGN1Q8N2Q7 840 aa27.78■■■□□ 2.04
PNKP-209ENST00000596726 USP42Q9H9J4 1324 aaKnown RBP27.77■■■□□ 2.04
PNKP-209ENST00000596726 LMOD3Q0VAK6 560 aa27.77■■■□□ 2.04
PNKP-209ENST00000596726 RRP7AQ9Y3A4 280 aaKnown RBP27.77■■■□□ 2.04
PNKP-209ENST00000596726 SNRPA1P09661 255 aaKnown RBP27.75■■■□□ 2.03
PNKP-209ENST00000596726 EIF5P55010 431 aaKnown RBP27.75■■■□□ 2.03
PNKP-209ENST00000596726 SRP68Q9UHB9 627 aaKnown RBP27.75■■■□□ 2.03
PNKP-209ENST00000596726 USP16Q9Y5T5 823 aa27.75■■■□□ 2.03
PNKP-209ENST00000596726 COL15A1P39059 1388 aa27.74■■■□□ 2.03
PNKP-209ENST00000596726 PRAMEF22A3QJZ6 481 aa27.74■■■□□ 2.03
PNKP-209ENST00000596726 CANXP27824 592 aaKnown RBP27.74■■■□□ 2.03
PNKP-209ENST00000596726 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
PNKP-209ENST00000596726 MMP10P09238 476 aa27.73■■■□□ 2.03
PNKP-209ENST00000596726 NEUROD2Q15784 382 aa27.73■■■□□ 2.03
PNKP-209ENST00000596726 KLHL34Q8N239 644 aa27.73■■■□□ 2.03
PNKP-209ENST00000596726 A1BGP04217 495 aa27.72■■■□□ 2.03
PNKP-209ENST00000596726 NARFQ9UHQ1 456 aa27.72■■■□□ 2.03
PNKP-209ENST00000596726 CD2APQ9Y5K6 639 aa27.72■■■□□ 2.03
PNKP-209ENST00000596726 EIF4A1P60842 406 aaKnown RBP27.71■■■□□ 2.03
PNKP-209ENST00000596726 BABAM1Q9NWV8 329 aa27.71■■■□□ 2.03
PNKP-209ENST00000596726 IL6STP40189 918 aaPredicted RBP27.7■■■□□ 2.02
PNKP-209ENST00000596726 FKBP8Q14318 412 aa27.7■■■□□ 2.02
PNKP-209ENST00000596726 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
PNKP-209ENST00000596726 LAMB4A4D0S4 1761 aa27.7■■■□□ 2.02
PNKP-209ENST00000596726 ZPR1O75312 459 aa27.69■■■□□ 2.02
PNKP-209ENST00000596726 USPL1Q5W0Q7 1092 aa27.69■■■□□ 2.02
PNKP-209ENST00000596726 APAF1O14727 1248 aa27.68■■■□□ 2.02
PNKP-209ENST00000596726 MRS2Q9HD23 443 aa27.68■■■□□ 2.02
PNKP-209ENST00000596726 KIF13BQ9NQT8 1826 aa27.68■■■□□ 2.02
PNKP-209ENST00000596726 A0A087WZG4 1122 aa27.67■■■□□ 2.02
PNKP-209ENST00000596726 GIGYF1O75420 1035 aaPredicted RBP27.67■■■□□ 2.02
PNKP-209ENST00000596726 BCL2L12Q9HB09 334 aa27.67■■■□□ 2.02
PNKP-209ENST00000596726 TSPYL4Q9UJ04 414 aa27.67■■■□□ 2.02
PNKP-209ENST00000596726 DCAF8L1A6NGE4 600 aa27.66■■■□□ 2.02
PNKP-209ENST00000596726 TM4SF1P30408 202 aa27.65■■■□□ 2.02
PNKP-209ENST00000596726 PARP3Q9Y6F1 533 aa27.64■■■□□ 2.02
PNKP-209ENST00000596726 SCN7AQ01118 1682 aa27.63■■■□□ 2.01
PNKP-209ENST00000596726 CHL1O00533 1208 aa27.63■■■□□ 2.01
PNKP-209ENST00000596726 DDR1Q08345 913 aa27.63■■■□□ 2.01
PNKP-209ENST00000596726 NBPF26B4DH59 902 aa27.62■■■□□ 2.01
PNKP-209ENST00000596726 PIP4K2AP48426 406 aaPredicted RBP27.62■■■□□ 2.01
PNKP-209ENST00000596726 NBPF10Q6P3W6 841 aaKnown RBP27.62■■■□□ 2.01
PNKP-209ENST00000596726 NBPF15Q8N660 670 aa27.62■■■□□ 2.01
PNKP-209ENST00000596726 TBC1D2BQ9UPU7 963 aa27.61■■■□□ 2.01
PNKP-209ENST00000596726 C10orf71Q711Q0 1435 aa27.6■■■□□ 2.01
PNKP-209ENST00000596726 POLRMTO00411 1230 aaKnown RBP27.6■■■□□ 2.01
PNKP-209ENST00000596726 ZNF330Q9Y3S2 320 aaPredicted RBP27.6■■■□□ 2.01
PNKP-209ENST00000596726 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
PNKP-209ENST00000596726 BCORQ6W2J9 1755 aa27.6■■■□□ 2.01
PNKP-209ENST00000596726 AFDNP55196 1824 aaKnown RBP27.6■■■□□ 2.01
PNKP-209ENST00000596726 NFIXQ14938 502 aa27.59■■■□□ 2.01
PNKP-209ENST00000596726 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
PNKP-209ENST00000596726 NRXN2Q9P2S2 1712 aa27.58■■■□□ 2.01
PNKP-209ENST00000596726 CAMTA2O94983 1202 aa27.57■■■□□ 2
PNKP-209ENST00000596726 DZIP3Q86Y13 1208 aaKnown RBP27.56■■■□□ 2
PNKP-209ENST00000596726 CFAP44Q96MT7 982 aa27.56■■■□□ 2
PNKP-209ENST00000596726 GOLGB1Q14789 3259 aaKnown RBP27.56■■■□□ 2
PNKP-209ENST00000596726 ZNF853P0CG23 659 aa27.55■■■□□ 2
PNKP-209ENST00000596726 GPR162Q16538 588 aa27.55■■■□□ 2
PNKP-209ENST00000596726 LAS1LQ9Y4W2 734 aaKnown RBP27.55■■■□□ 2
PNKP-209ENST00000596726 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
PNKP-209ENST00000596726 TGFB2P61812 414 aa27.54■■■□□ 2
PNKP-209ENST00000596726 PXDNLA1KZ92 1463 aa27.53■■■□□ 2
PNKP-209ENST00000596726 ERBB4Q15303 1308 aa27.53■■■□□ 2
PNKP-209ENST00000596726 TBC1D9BQ66K14 1250 aa27.53■■■□□ 2
PNKP-209ENST00000596726 UTRNP46939 3433 aa27.53■■■□□ 2
PNKP-209ENST00000596726 CALD1Q05682 793 aaKnown RBP27.52■■■□□ 2
PNKP-209ENST00000596726 NCBP3Q53F19 620 aaKnown RBP27.52■■■□□ 2
PNKP-209ENST00000596726 CHD4Q14839 1912 aa27.51■■■□□ 2
PNKP-209ENST00000596726 RGL2O15211 777 aa27.51■■□□□ 1.99
PNKP-209ENST00000596726 SERPINB2P05120 415 aa27.51■■□□□ 1.99
PNKP-209ENST00000596726 YBX3P16989 372 aaKnown RBP eCLIP27.51■■□□□ 1.99
PNKP-209ENST00000596726 CCDC27Q2M243 656 aa27.51■■□□□ 1.99
PNKP-209ENST00000596726 IFT57Q9NWB7 429 aa27.51■■□□□ 1.99
PNKP-209ENST00000596726 KRT24Q2M2I5 525 aa27.5■■□□□ 1.99
PNKP-209ENST00000596726 CLEC4GQ6UXB4 293 aa27.5■■□□□ 1.99
PNKP-209ENST00000596726 MBIPQ9NS73 344 aa27.5■■□□□ 1.99
PNKP-209ENST00000596726 BRCA1P38398 1863 aaKnown RBP27.49■■□□□ 1.99
PNKP-209ENST00000596726 BICDL1Q6ZP65 573 aa27.49■■□□□ 1.99
PNKP-209ENST00000596726 PELP1Q8IZL8 1130 aaKnown RBP27.49■■□□□ 1.99
PNKP-209ENST00000596726 EIF2S2P20042 333 aaKnown RBP27.48■■□□□ 1.99
PNKP-209ENST00000596726 GNAI1P63096 354 aa27.48■■□□□ 1.99
PNKP-209ENST00000596726 PDIA6Q15084 440 aa27.48■■□□□ 1.99
PNKP-209ENST00000596726 A0A0G2JLW4 131 aa27.47■■□□□ 1.99
PNKP-209ENST00000596726 LRP10Q7Z4F1 713 aa27.47■■□□□ 1.99
PNKP-209ENST00000596726 NUP98P52948 1817 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 HOXB7P09629 217 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 MYL6BP14649 208 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 DPEP1P16444 411 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 WWC1Q8IX03 1113 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 ZNF652Q9Y2D9 606 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 CARMIL3Q8ND23 1372 aa27.46■■□□□ 1.99
PNKP-209ENST00000596726 SENP3-EIF4A1A0A087X0R7 540 aa27.45■■□□□ 1.98
PNKP-209ENST00000596726 GRIN3BO60391 1043 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms