RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 MCM2P49736 904 aa28.13■■■□□ 2.09
SPTBN4-209ENST00000596411 HSP90AB4PQ58FF6 505 aa28.13■■■□□ 2.09
SPTBN4-209ENST00000596411 PPP1R42Q7Z4L9 355 aa28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 DCCP43146 1447 aa28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 ALDH1L1O75891 902 aa28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 EIF2S2P20042 333 aaKnown RBP28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 MCCP23508 829 aa28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 KIF1BPQ96EK5 621 aa28.12■■■□□ 2.09
SPTBN4-209ENST00000596411 GOLGA6L22H0YM25 854 aa28.11■■■□□ 2.09
SPTBN4-209ENST00000596411 USP42Q9H9J4 1324 aaKnown RBP28.11■■■□□ 2.09
SPTBN4-209ENST00000596411 KCNQ3O43525 872 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 KRT28Q7Z3Y7 464 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 HDAC5Q9UQL6 1122 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 PI4KAP2A4QPH2 592 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 SSFA2P28290 1259 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 PI4KAP1Q8N8J0 262 aa28.1■■■□□ 2.09
SPTBN4-209ENST00000596411 GIGYF1O75420 1035 aaPredicted RBP28.09■■■□□ 2.09
SPTBN4-209ENST00000596411 MRE11P49959 708 aa28.09■■■□□ 2.09
SPTBN4-209ENST00000596411 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
SPTBN4-209ENST00000596411 RHPN1Q8TCX5 695 aa28.08■■■□□ 2.09
SPTBN4-209ENST00000596411 ERBB3P21860 1342 aa28.08■■■□□ 2.09
SPTBN4-209ENST00000596411 AK9Q5TCS8 1911 aa28.08■■■□□ 2.09
SPTBN4-209ENST00000596411 FOXD4L1Q9NU39 408 aa28.08■■■□□ 2.09
SPTBN4-209ENST00000596411 RGPD5Q99666 1765 aa28.07■■■□□ 2.08
SPTBN4-209ENST00000596411 XRCC6P12956 609 aaKnown RBP eCLIP28.07■■■□□ 2.08
SPTBN4-209ENST00000596411 SCN11AQ9UI33 1791 aa28.07■■■□□ 2.08
SPTBN4-209ENST00000596411 SURF6O75683 361 aaKnown RBP28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 BAG4O95429 457 aaKnown RBP28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 NBPF7P0C2Y1 421 aaPredicted RBP28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 FAM43AQ8N2R8 423 aa28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 ZBTB7CA1YPR0 619 aa28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 SRGAP3O43295 1099 aa28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 TSHZ3Q63HK5 1081 aa28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
SPTBN4-209ENST00000596411 PI4K2BQ8TCG2 481 aa28.05■■■□□ 2.08
SPTBN4-209ENST00000596411 GZF1Q9H116 711 aaPredicted RBP28.05■■■□□ 2.08
SPTBN4-209ENST00000596411 TRIM6-TRIM34B2RNG4 842 aa28.04■■■□□ 2.08
SPTBN4-209ENST00000596411 KSR2Q6VAB6 950 aa28.04■■■□□ 2.08
SPTBN4-209ENST00000596411 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
SPTBN4-209ENST00000596411 COL18A1P39060 1754 aa28.04■■■□□ 2.08
SPTBN4-209ENST00000596411 AXIN2Q9Y2T1 843 aa28.04■■■□□ 2.08
SPTBN4-209ENST00000596411 TTC41PQ6P2S7 1318 aa28.03■■■□□ 2.08
SPTBN4-209ENST00000596411 UTYO14607 1347 aa28.03■■■□□ 2.08
SPTBN4-209ENST00000596411 KLHL40Q2TBA0 621 aa28.02■■■□□ 2.08
SPTBN4-209ENST00000596411 RILPL2Q969X0 211 aa28.02■■■□□ 2.08
SPTBN4-209ENST00000596411 XPCQ01831 940 aaPredicted RBP28.02■■■□□ 2.08
SPTBN4-209ENST00000596411 CUL4AQ13619 759 aa28.02■■■□□ 2.08
SPTBN4-209ENST00000596411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.08
SPTBN4-209ENST00000596411 MRC1P22897 1456 aa28.01■■■□□ 2.08
SPTBN4-209ENST00000596411 UNC5CLQ8IV45 518 aa28.01■■■□□ 2.07
SPTBN4-209ENST00000596411 IL1RAPL2Q9NP60 686 aa28.01■■■□□ 2.07
SPTBN4-209ENST00000596411 INTS4Q96HW7 963 aaKnown RBP28■■■□□ 2.07
SPTBN4-209ENST00000596411 ANO2Q9NQ90 1003 aa27.99■■■□□ 2.07
SPTBN4-209ENST00000596411 DDX21Q9NR30 783 aaKnown RBP eCLIP27.99■■■□□ 2.07
SPTBN4-209ENST00000596411 MAP3K2Q9Y2U5 619 aa27.99■■■□□ 2.07
SPTBN4-209ENST00000596411 NEK4P51957 841 aa27.98■■■□□ 2.07
SPTBN4-209ENST00000596411 ERC1Q8IUD2 1116 aa27.98■■■□□ 2.07
SPTBN4-209ENST00000596411 GRPEL1Q9HAV7 217 aa27.98■■■□□ 2.07
SPTBN4-209ENST00000596411 CNTROBQ8N137 903 aa27.98■■■□□ 2.07
SPTBN4-209ENST00000596411 LINS1Q8NG48 757 aa27.98■■■□□ 2.07
SPTBN4-209ENST00000596411 PKD1L3Q7Z443 1732 aa27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 KDM6AO15550 1401 aaPredicted RBP27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 DDX58O95786 925 aaKnown RBP27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 HSPA4P34932 840 aa27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 NUTM1Q86Y26 1132 aa27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 TMX3Q96JJ7 454 aa27.97■■■□□ 2.07
SPTBN4-209ENST00000596411 C5P01031 1676 aa27.96■■■□□ 2.07
SPTBN4-209ENST00000596411 SGSM2O43147 1006 aa27.95■■■□□ 2.07
SPTBN4-209ENST00000596411 GLRX3O76003 335 aaKnown RBP27.95■■■□□ 2.07
SPTBN4-209ENST00000596411 ANXA1P04083 346 aa27.95■■■□□ 2.07
SPTBN4-209ENST00000596411 PALD1Q9ULE6 856 aa27.95■■■□□ 2.07
SPTBN4-209ENST00000596411 RAD50Q92878 1312 aa27.95■■■□□ 2.07
SPTBN4-209ENST00000596411 PROSER3Q2NL68 480 aa27.95■■■□□ 2.06
SPTBN4-209ENST00000596411 LMOD2Q6P5Q4 547 aa27.95■■■□□ 2.06
SPTBN4-209ENST00000596411 ZGPATQ8N5A5 531 aaKnown RBP27.95■■■□□ 2.06
SPTBN4-209ENST00000596411 NPHP3Q7Z494 1330 aa27.95■■■□□ 2.06
SPTBN4-209ENST00000596411 RAPGEF4Q8WZA2 1011 aa27.93■■■□□ 2.06
SPTBN4-209ENST00000596411 SLC52A2Q9HAB3 445 aa27.93■■■□□ 2.06
SPTBN4-209ENST00000596411 C9orf78Q9NZ63 289 aaPredicted RBP27.93■■■□□ 2.06
SPTBN4-209ENST00000596411 PARP4Q9UKK3 1724 aaKnown RBP27.92■■■□□ 2.06
SPTBN4-209ENST00000596411 PDIA6Q15084 440 aa27.92■■■□□ 2.06
SPTBN4-209ENST00000596411 RTN4Q9NQC3 1192 aaKnown RBP27.92■■■□□ 2.06
SPTBN4-209ENST00000596411 ZDHHC9Q9Y397 364 aa27.92■■■□□ 2.06
SPTBN4-209ENST00000596411 STRCP1A6NGW2 1772 aa27.92■■■□□ 2.06
SPTBN4-209ENST00000596411 TNS3Q68CZ2 1445 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 ZNF790Q6PG37 636 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 CLASRPQ8N2M8 674 aaKnown RBP27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 LMBRD1Q9NUN5 540 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 SPG7Q9UQ90 795 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 MEGF6O75095 1541 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 GRM8O00222 908 aa27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 TATP17735 454 aaPredicted RBP27.91■■■□□ 2.06
SPTBN4-209ENST00000596411 PHKG2P15735 406 aa27.9■■■□□ 2.06
SPTBN4-209ENST00000596411 TMEM94Q12767 1356 aa27.9■■■□□ 2.06
SPTBN4-209ENST00000596411 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
SPTBN4-209ENST00000596411 ATF3P18847 181 aa27.89■■■□□ 2.06
SPTBN4-209ENST00000596411 PKP1Q13835 747 aa27.89■■■□□ 2.06
SPTBN4-209ENST00000596411 DDX49Q9Y6V7 483 aaKnown RBP27.89■■■□□ 2.06
SPTBN4-209ENST00000596411 GPATCH3Q96I76 525 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms