RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 COL24A1Q17RW2 1714 aa27.36■■□□□ 1.97
SH2D3A-204ENST00000595681 FAM9BQ8IZU0 186 aa27.35■■□□□ 1.97
SH2D3A-204ENST00000595681 LMOD3Q0VAK6 560 aa27.35■■□□□ 1.97
SH2D3A-204ENST00000595681 ARXQ96QS3 562 aa27.35■■□□□ 1.97
SH2D3A-204ENST00000595681 ADRA2BP18089 450 aa27.34■■□□□ 1.97
SH2D3A-204ENST00000595681 USP16Q9Y5T5 823 aa27.34■■□□□ 1.97
SH2D3A-204ENST00000595681 SOS1Q07889 1333 aaPredicted RBP27.34■■□□□ 1.97
SH2D3A-204ENST00000595681 KDM3BQ7LBC6 1761 aa27.33■■□□□ 1.97
SH2D3A-204ENST00000595681 STARD3NLO95772 234 aa27.32■■□□□ 1.96
SH2D3A-204ENST00000595681 CANXP27824 592 aaKnown RBP27.32■■□□□ 1.96
SH2D3A-204ENST00000595681 POLD1P28340 1107 aa27.32■■□□□ 1.96
SH2D3A-204ENST00000595681 DIEXFQ68CQ4 756 aaKnown RBP27.32■■□□□ 1.96
SH2D3A-204ENST00000595681 SRP68Q9UHB9 627 aaKnown RBP27.32■■□□□ 1.96
SH2D3A-204ENST00000595681 RFC4P35249 363 aa27.31■■□□□ 1.96
SH2D3A-204ENST00000595681 FHDC1Q9C0D6 1143 aaPredicted RBP27.31■■□□□ 1.96
SH2D3A-204ENST00000595681 C4AP0C0L4 1744 aa27.31■■□□□ 1.96
SH2D3A-204ENST00000595681 A1BGP04217 495 aa27.3■■□□□ 1.96
SH2D3A-204ENST00000595681 SNRPA1P09661 255 aaKnown RBP27.3■■□□□ 1.96
SH2D3A-204ENST00000595681 TEX13AQ9BXU3 409 aaPredicted RBP27.3■■□□□ 1.96
SH2D3A-204ENST00000595681 EIF4A1P60842 406 aaKnown RBP27.3■■□□□ 1.96
SH2D3A-204ENST00000595681 TSPYL4Q9UJ04 414 aa27.3■■□□□ 1.96
SH2D3A-204ENST00000595681 GYS1P13807 737 aa27.29■■□□□ 1.96
SH2D3A-204ENST00000595681 PIP4K2AP48426 406 aaPredicted RBP27.29■■□□□ 1.96
SH2D3A-204ENST00000595681 LAS1LQ9Y4W2 734 aaKnown RBP27.27■■□□□ 1.96
SH2D3A-204ENST00000595681 COL15A1P39059 1388 aa27.27■■□□□ 1.96
SH2D3A-204ENST00000595681 USP42Q9H9J4 1324 aaKnown RBP27.27■■□□□ 1.96
SH2D3A-204ENST00000595681 EIF5P55010 431 aaKnown RBP27.26■■□□□ 1.95
SH2D3A-204ENST00000595681 GIGYF1O75420 1035 aaPredicted RBP27.25■■□□□ 1.95
SH2D3A-204ENST00000595681 SYT17Q9BSW7 474 aa27.25■■□□□ 1.95
SH2D3A-204ENST00000595681 KLHL34Q8N239 644 aa27.25■■□□□ 1.95
SH2D3A-204ENST00000595681 CHL1O00533 1208 aa27.24■■□□□ 1.95
SH2D3A-204ENST00000595681 FKBP8Q14318 412 aa27.24■■□□□ 1.95
SH2D3A-204ENST00000595681 ZNF330Q9Y3S2 320 aaPredicted RBP27.24■■□□□ 1.95
SH2D3A-204ENST00000595681 SALL2Q9Y467 1007 aaPredicted RBP27.24■■□□□ 1.95
SH2D3A-204ENST00000595681 MMP10P09238 476 aa27.23■■□□□ 1.95
SH2D3A-204ENST00000595681 USPL1Q5W0Q7 1092 aa27.23■■□□□ 1.95
SH2D3A-204ENST00000595681 NBPF26B4DH59 902 aa27.22■■□□□ 1.95
SH2D3A-204ENST00000595681 NBPF10Q6P3W6 841 aaKnown RBP27.22■■□□□ 1.95
SH2D3A-204ENST00000595681 NLGN1Q8N2Q7 840 aa27.22■■□□□ 1.95
SH2D3A-204ENST00000595681 NBPF15Q8N660 670 aa27.22■■□□□ 1.95
SH2D3A-204ENST00000595681 BABAM1Q9NWV8 329 aa27.22■■□□□ 1.95
SH2D3A-204ENST00000595681 IL6STP40189 918 aaPredicted RBP27.21■■□□□ 1.95
SH2D3A-204ENST00000595681 KRT24Q2M2I5 525 aa27.21■■□□□ 1.95
SH2D3A-204ENST00000595681 MIER1Q8N108 512 aa27.21■■□□□ 1.95
SH2D3A-204ENST00000595681 GOLGB1Q14789 3259 aaKnown RBP27.2■■□□□ 1.95
SH2D3A-204ENST00000595681 BCL2L12Q9HB09 334 aa27.2■■□□□ 1.95
SH2D3A-204ENST00000595681 NARFQ9UHQ1 456 aa27.2■■□□□ 1.95
SH2D3A-204ENST00000595681 ZPR1O75312 459 aa27.2■■□□□ 1.94
SH2D3A-204ENST00000595681 TBC1D2BQ9UPU7 963 aa27.19■■□□□ 1.94
SH2D3A-204ENST00000595681 UTRNP46939 3433 aa27.18■■□□□ 1.94
SH2D3A-204ENST00000595681 NLGN2Q8NFZ4 835 aa27.18■■□□□ 1.94
SH2D3A-204ENST00000595681 LAMB4A4D0S4 1761 aa27.18■■□□□ 1.94
SH2D3A-204ENST00000595681 CCER2I3L3R5 266 aa27.17■■□□□ 1.94
SH2D3A-204ENST00000595681 CFAP44Q96MT7 982 aa27.17■■□□□ 1.94
SH2D3A-204ENST00000595681 ZNF853P0CG23 659 aa27.17■■□□□ 1.94
SH2D3A-204ENST00000595681 DDR1Q08345 913 aa27.16■■□□□ 1.94
SH2D3A-204ENST00000595681 MBIPQ9NS73 344 aa27.16■■□□□ 1.94
SH2D3A-204ENST00000595681 WWC1Q8IX03 1113 aa27.14■■□□□ 1.94
SH2D3A-204ENST00000595681 A0A087WZG4 1122 aa27.14■■□□□ 1.93
SH2D3A-204ENST00000595681 TM4SF1P30408 202 aa27.13■■□□□ 1.93
SH2D3A-204ENST00000595681 CCDC27Q2M243 656 aa27.13■■□□□ 1.93
SH2D3A-204ENST00000595681 IFT57Q9NWB7 429 aa27.13■■□□□ 1.93
SH2D3A-204ENST00000595681 CAMTA2O94983 1202 aa27.12■■□□□ 1.93
SH2D3A-204ENST00000595681 EIF2S2P20042 333 aaKnown RBP27.12■■□□□ 1.93
SH2D3A-204ENST00000595681 NFIXQ14938 502 aa27.12■■□□□ 1.93
SH2D3A-204ENST00000595681 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
SH2D3A-204ENST00000595681 POLRMTO00411 1230 aaKnown RBP27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 CALD1Q05682 793 aaKnown RBP27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 NGEFQ8N5V2 710 aa27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 NECTIN2Q92692 538 aa27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 CD2APQ9Y5K6 639 aa27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 PARP3Q9Y6F1 533 aa27.1■■□□□ 1.93
SH2D3A-204ENST00000595681 MYL6BP14649 208 aa27.09■■□□□ 1.93
SH2D3A-204ENST00000595681 GNAI1P63096 354 aa27.09■■□□□ 1.93
SH2D3A-204ENST00000595681 BICDL1Q6ZP65 573 aa27.09■■□□□ 1.93
SH2D3A-204ENST00000595681 NPM2Q86SE8 214 aaKnown RBP27.09■■□□□ 1.93
SH2D3A-204ENST00000595681 SCN7AQ01118 1682 aa27.09■■□□□ 1.93
SH2D3A-204ENST00000595681 PDIA6Q15084 440 aa27.08■■□□□ 1.93
SH2D3A-204ENST00000595681 PROSER3Q2NL68 480 aa27.08■■□□□ 1.93
SH2D3A-204ENST00000595681 TBC1D9BQ66K14 1250 aa27.08■■□□□ 1.93
SH2D3A-204ENST00000595681 ANXA1P04083 346 aa27.07■■□□□ 1.92
SH2D3A-204ENST00000595681 TSR2Q969E8 191 aaKnown RBP27.07■■□□□ 1.92
SH2D3A-204ENST00000595681 NCBP3Q53F19 620 aaKnown RBP27.06■■□□□ 1.92
SH2D3A-204ENST00000595681 LRP10Q7Z4F1 713 aa27.06■■□□□ 1.92
SH2D3A-204ENST00000595681 C10orf71Q711Q0 1435 aa27.06■■□□□ 1.92
SH2D3A-204ENST00000595681 TTLL7Q6ZT98 887 aa27.05■■□□□ 1.92
SH2D3A-204ENST00000595681 DUSP27Q5VZP5 1158 aa27.04■■□□□ 1.92
SH2D3A-204ENST00000595681 ELL2O00472 640 aaPredicted RBP27.04■■□□□ 1.92
SH2D3A-204ENST00000595681 ERBB4Q15303 1308 aa27.03■■□□□ 1.92
SH2D3A-204ENST00000595681 BCORQ6W2J9 1755 aa27.03■■□□□ 1.92
SH2D3A-204ENST00000595681 HLFQ16534 295 aa27.03■■□□□ 1.92
SH2D3A-204ENST00000595681 C8orf58Q8NAV2 365 aa27.03■■□□□ 1.92
SH2D3A-204ENST00000595681 WWC3Q9ULE0 1092 aa27.02■■□□□ 1.92
SH2D3A-204ENST00000595681 SERPINB2P05120 415 aa27.02■■□□□ 1.92
SH2D3A-204ENST00000595681 HDGFL1Q5TGJ6 251 aa27.01■■□□□ 1.91
SH2D3A-204ENST00000595681 SPINK5Q9NQ38 1064 aaPredicted RBP27■■□□□ 1.91
SH2D3A-204ENST00000595681 CHPF2Q9P2E5 772 aa27■■□□□ 1.91
SH2D3A-204ENST00000595681 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
SH2D3A-204ENST00000595681 HOXB7P09629 217 aa26.99■■□□□ 1.91
SH2D3A-204ENST00000595681 TSPYL6Q8N831 410 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 780.2 ms