RNA–Protein interactions for RNA: ENST00000593922.5

IRF3-207, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-207ENST00000593922 NBPF14Q5TI25 921 aa28.64■■■□□ 2.17
IRF3-207ENST00000593922 STK32BQ9NY57 414 aa28.64■■■□□ 2.17
IRF3-207ENST00000593922 CRKLP46109 303 aaKnown RBP28.63■■■□□ 2.17
IRF3-207ENST00000593922 KRT24Q2M2I5 525 aa28.63■■■□□ 2.17
IRF3-207ENST00000593922 TEX13AQ9BXU3 409 aaPredicted RBP28.62■■■□□ 2.17
IRF3-207ENST00000593922 RC3H1Q5TC82 1133 aaKnown RBP28.61■■■□□ 2.17
IRF3-207ENST00000593922 AK7Q96M32 723 aa28.61■■■□□ 2.17
IRF3-207ENST00000593922 AMIGO3Q86WK7 504 aa28.6■■■□□ 2.17
IRF3-207ENST00000593922 USP16Q9Y5T5 823 aa28.6■■■□□ 2.17
IRF3-207ENST00000593922 E9PSI1 815 aa28.59■■■□□ 2.17
IRF3-207ENST00000593922 STARD3NLO95772 234 aa28.59■■■□□ 2.17
IRF3-207ENST00000593922 INTS5Q6P9B9 1019 aaKnown RBP28.59■■■□□ 2.17
IRF3-207ENST00000593922 CCDC87Q9NVE4 849 aa28.59■■■□□ 2.17
IRF3-207ENST00000593922 GNPATO15228 680 aa28.58■■■□□ 2.17
IRF3-207ENST00000593922 R3HDM1Q15032 1099 aaKnown RBP28.58■■■□□ 2.17
IRF3-207ENST00000593922 MYH16Q9H6N6 1097 aa28.58■■■□□ 2.17
IRF3-207ENST00000593922 ZBTB1Q9Y2K1 713 aa28.58■■■□□ 2.17
IRF3-207ENST00000593922 PNPLA7Q6ZV29 1317 aa28.57■■■□□ 2.16
IRF3-207ENST00000593922 TFCP2L1Q9NZI6 479 aa28.57■■■□□ 2.16
IRF3-207ENST00000593922 HOXB7P09629 217 aa28.56■■■□□ 2.16
IRF3-207ENST00000593922 PSDA5PKW4 1024 aaPredicted RBP28.55■■■□□ 2.16
IRF3-207ENST00000593922 CDCA7LQ96GN5 454 aa28.55■■■□□ 2.16
IRF3-207ENST00000593922 SLFN5Q08AF3 891 aa28.54■■■□□ 2.16
IRF3-207ENST00000593922 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
IRF3-207ENST00000593922 C8orf58Q8NAV2 365 aa28.54■■■□□ 2.16
IRF3-207ENST00000593922 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
IRF3-207ENST00000593922 RPS6KA4O75676 772 aa28.53■■■□□ 2.16
IRF3-207ENST00000593922 SSFA2P28290 1259 aa28.53■■■□□ 2.16
IRF3-207ENST00000593922 SCN7AQ01118 1682 aa28.53■■■□□ 2.16
IRF3-207ENST00000593922 A1BGP04217 495 aa28.53■■■□□ 2.16
IRF3-207ENST00000593922 SMIM5Q71RC9 77 aa28.53■■■□□ 2.16
IRF3-207ENST00000593922 RTCBQ9Y3I0 505 aaKnown RBP28.53■■■□□ 2.16
IRF3-207ENST00000593922 BCORQ6W2J9 1755 aa28.52■■■□□ 2.16
IRF3-207ENST00000593922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.52■■■□□ 2.16
IRF3-207ENST00000593922 TSPYL6Q8N831 410 aa28.52■■■□□ 2.16
IRF3-207ENST00000593922 COL24A1Q17RW2 1714 aa28.51■■■□□ 2.16
IRF3-207ENST00000593922 COL15A1P39059 1388 aa28.51■■■□□ 2.15
IRF3-207ENST00000593922 TRMT2AQ8IZ69 625 aaKnown RBP28.51■■■□□ 2.15
IRF3-207ENST00000593922 PDGFDQ9GZP0 370 aaPredicted RBP28.51■■■□□ 2.15
IRF3-207ENST00000593922 PHF14O94880 888 aa28.5■■■□□ 2.15
IRF3-207ENST00000593922 NEFLP07196 543 aa28.5■■■□□ 2.15
IRF3-207ENST00000593922 ERBB4Q15303 1308 aa28.5■■■□□ 2.15
IRF3-207ENST00000593922 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
IRF3-207ENST00000593922 ADRA2BP18089 450 aa28.49■■■□□ 2.15
IRF3-207ENST00000593922 CANXP27824 592 aaKnown RBP28.49■■■□□ 2.15
IRF3-207ENST00000593922 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
IRF3-207ENST00000593922 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
IRF3-207ENST00000593922 CACNA1FO60840 1977 aa28.49■■■□□ 2.15
IRF3-207ENST00000593922 ELL2O00472 640 aaPredicted RBP28.48■■■□□ 2.15
IRF3-207ENST00000593922 PIP4K2AP48426 406 aaPredicted RBP28.48■■■□□ 2.15
IRF3-207ENST00000593922 EXOSC9Q06265 439 aaKnown RBP28.48■■■□□ 2.15
IRF3-207ENST00000593922 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
IRF3-207ENST00000593922 FLAD1Q8NFF5 587 aa28.48■■■□□ 2.15
IRF3-207ENST00000593922 EIF2S2P20042 333 aaKnown RBP28.47■■■□□ 2.15
IRF3-207ENST00000593922 IL6STP40189 918 aaPredicted RBP28.47■■■□□ 2.15
IRF3-207ENST00000593922 EIF5P55010 431 aaKnown RBP28.47■■■□□ 2.15
IRF3-207ENST00000593922 HDGFL1Q5TGJ6 251 aa28.47■■■□□ 2.15
IRF3-207ENST00000593922 TWISTNBQ3B726 338 aaPredicted RBP28.46■■■□□ 2.15
IRF3-207ENST00000593922 SRCAPQ6ZRS2 3230 aa28.46■■■□□ 2.15
IRF3-207ENST00000593922 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
IRF3-207ENST00000593922 PDIA6Q15084 440 aa28.45■■■□□ 2.14
IRF3-207ENST00000593922 NECTIN2Q92692 538 aa28.45■■■□□ 2.14
IRF3-207ENST00000593922 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.14
IRF3-207ENST00000593922 LRP10Q7Z4F1 713 aa28.44■■■□□ 2.14
IRF3-207ENST00000593922 ARHGEF1Q92888 912 aaKnown RBP28.44■■■□□ 2.14
IRF3-207ENST00000593922 TRAPPC3LQ5T215 181 aa28.43■■■□□ 2.14
IRF3-207ENST00000593922 PROSER3Q2NL68 480 aa28.42■■■□□ 2.14
IRF3-207ENST00000593922 CHPF2Q9P2E5 772 aa28.42■■■□□ 2.14
IRF3-207ENST00000593922 RCAN3Q9UKA8 241 aa28.42■■■□□ 2.14
IRF3-207ENST00000593922 USP42Q9H9J4 1324 aaKnown RBP28.41■■■□□ 2.14
IRF3-207ENST00000593922 VAMP4O75379 141 aa28.4■■■□□ 2.14
IRF3-207ENST00000593922 DDX21Q9NR30 783 aaKnown RBP eCLIP28.4■■■□□ 2.14
IRF3-207ENST00000593922 ZNF330Q9Y3S2 320 aaPredicted RBP28.4■■■□□ 2.14
IRF3-207ENST00000593922 ANXA1P04083 346 aa28.4■■■□□ 2.14
IRF3-207ENST00000593922 MYL6BP14649 208 aa28.4■■■□□ 2.14
IRF3-207ENST00000593922 MSH5O43196 834 aa28.39■■■□□ 2.13
IRF3-207ENST00000593922 DBF4Q9UBU7 674 aaPredicted RBP28.39■■■□□ 2.13
IRF3-207ENST00000593922 NUP98P52948 1817 aa28.38■■■□□ 2.13
IRF3-207ENST00000593922 RFC4P35249 363 aa28.38■■■□□ 2.13
IRF3-207ENST00000593922 CCDC30Q5VVM6 783 aa28.38■■■□□ 2.13
IRF3-207ENST00000593922 SLC16A10Q8TF71 515 aa28.38■■■□□ 2.13
IRF3-207ENST00000593922 CHMP4AQ9BY43 222 aa28.37■■■□□ 2.13
IRF3-207ENST00000593922 SRP68Q9UHB9 627 aaKnown RBP28.37■■■□□ 2.13
IRF3-207ENST00000593922 LRP5O75197 1615 aa28.36■■■□□ 2.13
IRF3-207ENST00000593922 ARFGEF2Q9Y6D5 1785 aa28.36■■■□□ 2.13
IRF3-207ENST00000593922 A0A087WZG4 1122 aa28.36■■■□□ 2.13
IRF3-207ENST00000593922 NARFQ9UHQ1 456 aa28.36■■■□□ 2.13
IRF3-207ENST00000593922 ANKRD36CQ5JPF3 1778 aa28.35■■■□□ 2.13
IRF3-207ENST00000593922 ZBTB7AO95365 584 aa28.34■■■□□ 2.13
IRF3-207ENST00000593922 CT47B1P0C2W7 299 aaPredicted RBP28.34■■■□□ 2.13
IRF3-207ENST00000593922 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
IRF3-207ENST00000593922 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
IRF3-207ENST00000593922 TBC1D2BQ9UPU7 963 aa28.34■■■□□ 2.13
IRF3-207ENST00000593922 GYS1P13807 737 aa28.34■■■□□ 2.13
IRF3-207ENST00000593922 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
IRF3-207ENST00000593922 CAMTA2O94983 1202 aa28.33■■■□□ 2.13
IRF3-207ENST00000593922 TCERG1O14776 1098 aaKnown RBP28.32■■■□□ 2.12
IRF3-207ENST00000593922 ZPR1O75312 459 aa28.32■■■□□ 2.12
IRF3-207ENST00000593922 USPL1Q5W0Q7 1092 aa28.32■■■□□ 2.12
IRF3-207ENST00000593922 TTLL7Q6ZT98 887 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms