RNA–Protein interactions for RNA: ENST00000590962.1

SPRED3-207, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 5

Gene SPRED3, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-207ENST00000590962 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
SPRED3-207ENST00000590962 CNTNAP4Q9C0A0 1308 aa12.81□□□□□ -0.36
SPRED3-207ENST00000590962 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
SPRED3-207ENST00000590962 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
SPRED3-207ENST00000590962 GNPATO15228 680 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 SNRPA1P09661 255 aaKnown RBP12.79□□□□□ -0.36
SPRED3-207ENST00000590962 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 AK7Q96M32 723 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 PNPLA7Q6ZV29 1317 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
SPRED3-207ENST00000590962 A1BGP04217 495 aa12.78□□□□□ -0.36
SPRED3-207ENST00000590962 PIP4K2AP48426 406 aaPredicted RBP12.78□□□□□ -0.36
SPRED3-207ENST00000590962 RC3H1Q5TC82 1133 aaKnown RBP12.78□□□□□ -0.36
SPRED3-207ENST00000590962 C8orf58Q8NAV2 365 aa12.78□□□□□ -0.36
SPRED3-207ENST00000590962 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
SPRED3-207ENST00000590962 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
SPRED3-207ENST00000590962 PHF14O94880 888 aa12.77□□□□□ -0.37
SPRED3-207ENST00000590962 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
SPRED3-207ENST00000590962 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.37
SPRED3-207ENST00000590962 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 STARD3NLO95772 234 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
SPRED3-207ENST00000590962 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
SPRED3-207ENST00000590962 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
SPRED3-207ENST00000590962 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
SPRED3-207ENST00000590962 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
SPRED3-207ENST00000590962 COL15A1P39059 1388 aa12.74□□□□□ -0.37
SPRED3-207ENST00000590962 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
SPRED3-207ENST00000590962 ANXA1P04083 346 aa12.74□□□□□ -0.37
SPRED3-207ENST00000590962 SSFA2P28290 1259 aa12.74□□□□□ -0.37
SPRED3-207ENST00000590962 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
SPRED3-207ENST00000590962 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
SPRED3-207ENST00000590962 E9PSI1 815 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 HOXB7P09629 217 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
SPRED3-207ENST00000590962 EIF5P55010 431 aaKnown RBP12.73□□□□□ -0.37
SPRED3-207ENST00000590962 PDIA6Q15084 440 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 PROSER3Q2NL68 480 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 TRMT2AQ8IZ69 625 aaKnown RBP12.73□□□□□ -0.37
SPRED3-207ENST00000590962 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
SPRED3-207ENST00000590962 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 NUP98P52948 1817 aa12.73□□□□□ -0.37
SPRED3-207ENST00000590962 MSH5O43196 834 aa12.72□□□□□ -0.37
SPRED3-207ENST00000590962 IL6STP40189 918 aaPredicted RBP12.72□□□□□ -0.37
SPRED3-207ENST00000590962 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
SPRED3-207ENST00000590962 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
SPRED3-207ENST00000590962 HDGFL1Q5TGJ6 251 aa12.72□□□□□ -0.37
SPRED3-207ENST00000590962 LRP10Q7Z4F1 713 aa12.72□□□□□ -0.37
SPRED3-207ENST00000590962 SRP68Q9UHB9 627 aaKnown RBP12.72□□□□□ -0.37
SPRED3-207ENST00000590962 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
SPRED3-207ENST00000590962 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
SPRED3-207ENST00000590962 MYL6BP14649 208 aa12.71□□□□□ -0.37
SPRED3-207ENST00000590962 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
SPRED3-207ENST00000590962 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
SPRED3-207ENST00000590962 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
SPRED3-207ENST00000590962 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
SPRED3-207ENST00000590962 VAMP4O75379 141 aa12.7□□□□□ -0.38
SPRED3-207ENST00000590962 ADRA2BP18089 450 aa12.7□□□□□ -0.38
SPRED3-207ENST00000590962 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
SPRED3-207ENST00000590962 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
SPRED3-207ENST00000590962 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
SPRED3-207ENST00000590962 RFC4P35249 363 aa12.69□□□□□ -0.38
SPRED3-207ENST00000590962 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
SPRED3-207ENST00000590962 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
SPRED3-207ENST00000590962 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPRED3-207ENST00000590962 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
SPRED3-207ENST00000590962 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
SPRED3-207ENST00000590962 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
SPRED3-207ENST00000590962 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
SPRED3-207ENST00000590962 GYS1P13807 737 aa12.68□□□□□ -0.38
SPRED3-207ENST00000590962 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
SPRED3-207ENST00000590962 TTLL7Q6ZT98 887 aa12.68□□□□□ -0.38
SPRED3-207ENST00000590962 DZIP3Q86Y13 1208 aaKnown RBP12.68□□□□□ -0.38
SPRED3-207ENST00000590962 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
SPRED3-207ENST00000590962 LRP5O75197 1615 aa12.68□□□□□ -0.38
SPRED3-207ENST00000590962 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
SPRED3-207ENST00000590962 FKBP8Q14318 412 aa12.67□□□□□ -0.38
SPRED3-207ENST00000590962 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
SPRED3-207ENST00000590962 MTFR1LQ9H019 292 aa12.67□□□□□ -0.38
SPRED3-207ENST00000590962 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
SPRED3-207ENST00000590962 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
SPRED3-207ENST00000590962 A0A087WZG4 1122 aa12.66□□□□□ -0.38
SPRED3-207ENST00000590962 PTGER2P43116 358 aa12.66□□□□□ -0.38
SPRED3-207ENST00000590962 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
SPRED3-207ENST00000590962 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
SPRED3-207ENST00000590962 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms