RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 MMP10P09238 476 aa24.2■■□□□ 1.46
LDLRAD4-215ENST00000590371 GYS1P13807 737 aa24.2■■□□□ 1.46
LDLRAD4-215ENST00000590371 RIPK4P57078 832 aa24.2■■□□□ 1.46
LDLRAD4-215ENST00000590371 COL15A1P39059 1388 aa24.19■■□□□ 1.46
LDLRAD4-215ENST00000590371 NLGN2Q8NFZ4 835 aa24.19■■□□□ 1.46
LDLRAD4-215ENST00000590371 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
LDLRAD4-215ENST00000590371 SRP68Q9UHB9 627 aaKnown RBP24.19■■□□□ 1.46
LDLRAD4-215ENST00000590371 ADAMTS8Q9UP79 889 aa24.19■■□□□ 1.46
LDLRAD4-215ENST00000590371 USP42Q9H9J4 1324 aaKnown RBP24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 PNISRQ8TF01 805 aaKnown RBP24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 MIS18AQ9NYP9 233 aa24.18■■□□□ 1.46
LDLRAD4-215ENST00000590371 ANP32CO43423 234 aa24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 TMPOP42166 694 aaKnown RBP24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 ZNF330Q9Y3S2 320 aaPredicted RBP24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 CD2APQ9Y5K6 639 aa24.17■■□□□ 1.46
LDLRAD4-215ENST00000590371 GPR162Q16538 588 aa24.16■■□□□ 1.46
LDLRAD4-215ENST00000590371 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
LDLRAD4-215ENST00000590371 PARP3Q9Y6F1 533 aa24.16■■□□□ 1.46
LDLRAD4-215ENST00000590371 SNRPA1P09661 255 aaKnown RBP24.15■■□□□ 1.46
LDLRAD4-215ENST00000590371 USPL1Q5W0Q7 1092 aa24.15■■□□□ 1.46
LDLRAD4-215ENST00000590371 KDM3BQ7LBC6 1761 aa24.14■■□□□ 1.45
LDLRAD4-215ENST00000590371 A0A087WZG4 1122 aa24.13■■□□□ 1.45
LDLRAD4-215ENST00000590371 FKBP8Q14318 412 aa24.13■■□□□ 1.45
LDLRAD4-215ENST00000590371 NARFQ9UHQ1 456 aa24.13■■□□□ 1.45
LDLRAD4-215ENST00000590371 PRAMEF22A3QJZ6 481 aa24.12■■□□□ 1.45
LDLRAD4-215ENST00000590371 A1BGP04217 495 aa24.12■■□□□ 1.45
LDLRAD4-215ENST00000590371 USP16Q9Y5T5 823 aa24.12■■□□□ 1.45
LDLRAD4-215ENST00000590371 EIF5P55010 431 aaKnown RBP24.11■■□□□ 1.45
LDLRAD4-215ENST00000590371 IL6STP40189 918 aaPredicted RBP24.1■■□□□ 1.45
LDLRAD4-215ENST00000590371 TSPYL4Q9UJ04 414 aa24.1■■□□□ 1.45
LDLRAD4-215ENST00000590371 LAMB4A4D0S4 1761 aa24.08■■□□□ 1.44
LDLRAD4-215ENST00000590371 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
LDLRAD4-215ENST00000590371 TBC1D2BQ9UPU7 963 aa24.07■■□□□ 1.44
LDLRAD4-215ENST00000590371 EIF4A1P60842 406 aaKnown RBP24.06■■□□□ 1.44
LDLRAD4-215ENST00000590371 KIF13BQ9NQT8 1826 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 C10orf71Q711Q0 1435 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 YY1P25490 414 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 DDR1Q08345 913 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 LAS1LQ9Y4W2 734 aaKnown RBP24.05■■□□□ 1.44
LDLRAD4-215ENST00000590371 GIGYF1O75420 1035 aaPredicted RBP24.04■■□□□ 1.44
LDLRAD4-215ENST00000590371 TM4SF1P30408 202 aa24.04■■□□□ 1.44
LDLRAD4-215ENST00000590371 WWC3Q9ULE0 1092 aa24.04■■□□□ 1.44
LDLRAD4-215ENST00000590371 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
LDLRAD4-215ENST00000590371 POLRMTO00411 1230 aaKnown RBP24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 APAF1O14727 1248 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 NFIXQ14938 502 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 BICDL1Q6ZP65 573 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 DZIP3Q86Y13 1208 aaKnown RBP24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
LDLRAD4-215ENST00000590371 N4BP2Q86UW6 1770 aaPredicted RBP24.02■■□□□ 1.44
LDLRAD4-215ENST00000590371 TGFB2P61812 414 aa24.02■■□□□ 1.44
LDLRAD4-215ENST00000590371 CHD4Q14839 1912 aa24.02■■□□□ 1.44
LDLRAD4-215ENST00000590371 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
LDLRAD4-215ENST00000590371 YBX3P16989 372 aaKnown RBP eCLIP24.01■■□□□ 1.43
LDLRAD4-215ENST00000590371 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
LDLRAD4-215ENST00000590371 PXDNLA1KZ92 1463 aa24■■□□□ 1.43
LDLRAD4-215ENST00000590371 BCORQ6W2J9 1755 aa23.99■■□□□ 1.43
LDLRAD4-215ENST00000590371 A0A0G2JLW4 131 aa23.99■■□□□ 1.43
LDLRAD4-215ENST00000590371 NBPF26B4DH59 902 aa23.99■■□□□ 1.43
LDLRAD4-215ENST00000590371 NBPF10Q6P3W6 841 aaKnown RBP23.99■■□□□ 1.43
LDLRAD4-215ENST00000590371 NBPF15Q8N660 670 aa23.99■■□□□ 1.43
LDLRAD4-215ENST00000590371 CAMTA2O94983 1202 aa23.98■■□□□ 1.43
LDLRAD4-215ENST00000590371 SERPINB2P05120 415 aa23.98■■□□□ 1.43
LDLRAD4-215ENST00000590371 TBC1D9BQ66K14 1250 aa23.98■■□□□ 1.43
LDLRAD4-215ENST00000590371 NGEFQ8N5V2 710 aa23.98■■□□□ 1.43
LDLRAD4-215ENST00000590371 KIAA1551Q9HCM1 1747 aa23.97■■□□□ 1.43
LDLRAD4-215ENST00000590371 ZNF652Q9Y2D9 606 aa23.97■■□□□ 1.43
LDLRAD4-215ENST00000590371 DPEP1P16444 411 aa23.96■■□□□ 1.43
LDLRAD4-215ENST00000590371 EIF2S2P20042 333 aaKnown RBP23.96■■□□□ 1.43
LDLRAD4-215ENST00000590371 CHL1O00533 1208 aa23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 NPHP1O15259 732 aa23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 MYL6BP14649 208 aa23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 CALD1Q05682 793 aaKnown RBP23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 SETDB2Q96T68 719 aa23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 GOLGB1Q14789 3259 aaKnown RBP23.95■■□□□ 1.42
LDLRAD4-215ENST00000590371 CARMIL3Q8ND23 1372 aa23.94■■□□□ 1.42
LDLRAD4-215ENST00000590371 NRXN2Q9P2S2 1712 aa23.94■■□□□ 1.42
LDLRAD4-215ENST00000590371 UTRNP46939 3433 aa23.94■■□□□ 1.42
LDLRAD4-215ENST00000590371 BCS1LQ9Y276 419 aa23.93■■□□□ 1.42
LDLRAD4-215ENST00000590371 ERBB4Q15303 1308 aa23.92■■□□□ 1.42
LDLRAD4-215ENST00000590371 CLEC4GQ6UXB4 293 aa23.92■■□□□ 1.42
LDLRAD4-215ENST00000590371 KIF6Q6ZMV9 814 aa23.92■■□□□ 1.42
LDLRAD4-215ENST00000590371 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
LDLRAD4-215ENST00000590371 SENP3-EIF4A1A0A087X0R7 540 aa23.91■■□□□ 1.42
LDLRAD4-215ENST00000590371 CHRNA5P30532 468 aa23.9■■□□□ 1.42
LDLRAD4-215ENST00000590371 NECTIN2Q92692 538 aa23.9■■□□□ 1.42
LDLRAD4-215ENST00000590371 PIM2Q9P1W9 311 aa23.9■■□□□ 1.42
LDLRAD4-215ENST00000590371 BRCA1P38398 1863 aaKnown RBP23.9■■□□□ 1.42
LDLRAD4-215ENST00000590371 GNAI1P63096 354 aa23.89■■□□□ 1.41
LDLRAD4-215ENST00000590371 KRT24Q2M2I5 525 aa23.89■■□□□ 1.41
LDLRAD4-215ENST00000590371 CNBD1Q8NA66 436 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms