RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 AK7Q96M32 723 aa12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
HMGN1P31-201ENST00000590085 CHL1O00533 1208 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 GNPATO15228 680 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 NGEFQ8N5V2 710 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 IFT57Q9NWB7 429 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
HMGN1P31-201ENST00000590085 IL16Q14005 1332 aa12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 ZNF521Q96K83 1311 aa12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 SSFA2P28290 1259 aa12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 CCDC87Q9NVE4 849 aa12.21□□□□□ -0.45
HMGN1P31-201ENST00000590085 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P31-201ENST00000590085 COL15A1P39059 1388 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 STARD3NLO95772 234 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 GNAI1P63096 354 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 FLAD1Q8NFF5 587 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 ZBTB1Q9Y2K1 713 aa12.19□□□□□ -0.46
HMGN1P31-201ENST00000590085 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 PHF14O94880 888 aa12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 GOLGB1Q14789 3259 aaKnown RBP12.18□□□□□ -0.46
HMGN1P31-201ENST00000590085 KRT24Q2M2I5 525 aa12.17□□□□□ -0.46
HMGN1P31-201ENST00000590085 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
HMGN1P31-201ENST00000590085 SLC16A10Q8TF71 515 aa12.17□□□□□ -0.46
HMGN1P31-201ENST00000590085 SALL2Q9Y467 1007 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P31-201ENST00000590085 A1BGP04217 495 aa12.16□□□□□ -0.46
HMGN1P31-201ENST00000590085 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
HMGN1P31-201ENST00000590085 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
HMGN1P31-201ENST00000590085 DLEC1Q9Y238 1755 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 HOXB7P09629 217 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
HMGN1P31-201ENST00000590085 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 PTGER2P43116 358 aa12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 TRAPPC3LQ5T215 181 aa12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
HMGN1P31-201ENST00000590085 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P31-201ENST00000590085 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
HMGN1P31-201ENST00000590085 LAMB2P55268 1798 aa12.13□□□□□ -0.47
HMGN1P31-201ENST00000590085 GYS1P13807 737 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 RFC4P35249 363 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 DUSP27Q5VZP5 1158 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
HMGN1P31-201ENST00000590085 COL11A2P13942 1736 aaPredicted RBP12.11□□□□□ -0.47
HMGN1P31-201ENST00000590085 A0A087WZG4 1122 aa12.11□□□□□ -0.47
HMGN1P31-201ENST00000590085 PDIA6Q15084 440 aa12.11□□□□□ -0.47
HMGN1P31-201ENST00000590085 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
HMGN1P31-201ENST00000590085 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
HMGN1P31-201ENST00000590085 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 PROSER3Q2NL68 480 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 MYH16Q9H6N6 1097 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 UTRNP46939 3433 aa12.1□□□□□ -0.47
HMGN1P31-201ENST00000590085 E9PSI1 815 aa12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
HMGN1P31-201ENST00000590085 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms