RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 NGEFQ8N5V2 710 aa26.3■■□□□ 1.8
RBM42-204ENST00000589559 ARHGEF1Q92888 912 aaKnown RBP26.3■■□□□ 1.8
RBM42-204ENST00000589559 ARXQ96QS3 562 aa26.3■■□□□ 1.8
RBM42-204ENST00000589559 TJP1Q07157 1748 aa26.29■■□□□ 1.8
RBM42-204ENST00000589559 SGIP1Q9BQI5 828 aa26.29■■□□□ 1.8
RBM42-204ENST00000589559 TRIM35Q9UPQ4 493 aa26.29■■□□□ 1.8
RBM42-204ENST00000589559 KCNQ3O43525 872 aa26.28■■□□□ 1.8
RBM42-204ENST00000589559 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
RBM42-204ENST00000589559 ZPR1O75312 459 aa26.27■■□□□ 1.8
RBM42-204ENST00000589559 MIS18AQ9NYP9 233 aa26.27■■□□□ 1.8
RBM42-204ENST00000589559 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
RBM42-204ENST00000589559 CCDC27Q2M243 656 aa26.26■■□□□ 1.79
RBM42-204ENST00000589559 MYH14Q7Z406 1995 aaKnown RBP26.26■■□□□ 1.79
RBM42-204ENST00000589559 CCER2I3L3R5 266 aa26.25■■□□□ 1.79
RBM42-204ENST00000589559 EIF4A1P60842 406 aaKnown RBP26.25■■□□□ 1.79
RBM42-204ENST00000589559 SOS1Q07889 1333 aaPredicted RBP26.24■■□□□ 1.79
RBM42-204ENST00000589559 DCAF8L1A6NGE4 600 aa26.24■■□□□ 1.79
RBM42-204ENST00000589559 CANXP27824 592 aaKnown RBP26.24■■□□□ 1.79
RBM42-204ENST00000589559 CFAP44Q96MT7 982 aa26.24■■□□□ 1.79
RBM42-204ENST00000589559 CHL1O00533 1208 aa26.23■■□□□ 1.79
RBM42-204ENST00000589559 GIGYF1O75420 1035 aaPredicted RBP26.23■■□□□ 1.79
RBM42-204ENST00000589559 AMIGO3Q86WK7 504 aa26.23■■□□□ 1.79
RBM42-204ENST00000589559 ZBTB1Q9Y2K1 713 aa26.23■■□□□ 1.79
RBM42-204ENST00000589559 USP16Q9Y5T5 823 aa26.23■■□□□ 1.79
RBM42-204ENST00000589559 COL24A1Q17RW2 1714 aa26.22■■□□□ 1.79
RBM42-204ENST00000589559 GNAI1P63096 354 aa26.22■■□□□ 1.79
RBM42-204ENST00000589559 FAM9BQ8IZU0 186 aa26.22■■□□□ 1.79
RBM42-204ENST00000589559 CHMP4AQ9BY43 222 aa26.22■■□□□ 1.79
RBM42-204ENST00000589559 EIF5P55010 431 aaKnown RBP26.21■■□□□ 1.79
RBM42-204ENST00000589559 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
RBM42-204ENST00000589559 NARFQ9UHQ1 456 aa26.21■■□□□ 1.79
RBM42-204ENST00000589559 LAS1LQ9Y4W2 734 aaKnown RBP26.21■■□□□ 1.79
RBM42-204ENST00000589559 COL15A1P39059 1388 aa26.2■■□□□ 1.78
RBM42-204ENST00000589559 KDM3BQ7LBC6 1761 aa26.2■■□□□ 1.78
RBM42-204ENST00000589559 USP42Q9H9J4 1324 aaKnown RBP26.2■■□□□ 1.78
RBM42-204ENST00000589559 GYS1P13807 737 aa26.19■■□□□ 1.78
RBM42-204ENST00000589559 MSL1Q68DK7 614 aa26.19■■□□□ 1.78
RBM42-204ENST00000589559 IFT57Q9NWB7 429 aa26.19■■□□□ 1.78
RBM42-204ENST00000589559 A1BGP04217 495 aa26.18■■□□□ 1.78
RBM42-204ENST00000589559 SMIM5Q71RC9 77 aa26.18■■□□□ 1.78
RBM42-204ENST00000589559 ERBB4Q15303 1308 aa26.18■■□□□ 1.78
RBM42-204ENST00000589559 PARP3Q9Y6F1 533 aa26.16■■□□□ 1.78
RBM42-204ENST00000589559 C4AP0C0L4 1744 aa26.16■■□□□ 1.78
RBM42-204ENST00000589559 RGL2O15211 777 aa26.15■■□□□ 1.78
RBM42-204ENST00000589559 HOXB7P09629 217 aa26.15■■□□□ 1.78
RBM42-204ENST00000589559 SYT17Q9BSW7 474 aa26.15■■□□□ 1.78
RBM42-204ENST00000589559 FHDC1Q9C0D6 1143 aaPredicted RBP26.15■■□□□ 1.78
RBM42-204ENST00000589559 CD2APQ9Y5K6 639 aa26.15■■□□□ 1.78
RBM42-204ENST00000589559 ZNF330Q9Y3S2 320 aaPredicted RBP26.14■■□□□ 1.78
RBM42-204ENST00000589559 MMP10P09238 476 aa26.14■■□□□ 1.77
RBM42-204ENST00000589559 ZNF853P0CG23 659 aa26.14■■□□□ 1.77
RBM42-204ENST00000589559 USPL1Q5W0Q7 1092 aa26.14■■□□□ 1.77
RBM42-204ENST00000589559 WWC1Q8IX03 1113 aa26.14■■□□□ 1.77
RBM42-204ENST00000589559 IL16Q14005 1332 aa26.13■■□□□ 1.77
RBM42-204ENST00000589559 WDR63Q8IWG1 891 aa26.13■■□□□ 1.77
RBM42-204ENST00000589559 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
RBM42-204ENST00000589559 CLEC4GQ6UXB4 293 aa26.12■■□□□ 1.77
RBM42-204ENST00000589559 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
RBM42-204ENST00000589559 ZNF652Q9Y2D9 606 aa26.12■■□□□ 1.77
RBM42-204ENST00000589559 DZIP3Q86Y13 1208 aaKnown RBP26.11■■□□□ 1.77
RBM42-204ENST00000589559 KLHL34Q8N239 644 aa26.1■■□□□ 1.77
RBM42-204ENST00000589559 MBIPQ9NS73 344 aa26.1■■□□□ 1.77
RBM42-204ENST00000589559 LAMB4A4D0S4 1761 aa26.09■■□□□ 1.77
RBM42-204ENST00000589559 FKBP8Q14318 412 aa26.09■■□□□ 1.77
RBM42-204ENST00000589559 TBC1D2BQ9UPU7 963 aa26.09■■□□□ 1.77
RBM42-204ENST00000589559 EIF2S2P20042 333 aaKnown RBP26.08■■□□□ 1.77
RBM42-204ENST00000589559 TM4SF1P30408 202 aa26.08■■□□□ 1.77
RBM42-204ENST00000589559 NBPF26B4DH59 902 aa26.06■■□□□ 1.76
RBM42-204ENST00000589559 NBPF10Q6P3W6 841 aaKnown RBP26.06■■□□□ 1.76
RBM42-204ENST00000589559 NBPF15Q8N660 670 aa26.06■■□□□ 1.76
RBM42-204ENST00000589559 ERVV-1B6SEH8 477 aa26.05■■□□□ 1.76
RBM42-204ENST00000589559 KIF6Q6ZMV9 814 aa26.05■■□□□ 1.76
RBM42-204ENST00000589559 TGFB2P61812 414 aa26.04■■□□□ 1.76
RBM42-204ENST00000589559 DUSP27Q5VZP5 1158 aa26.04■■□□□ 1.76
RBM42-204ENST00000589559 SETDB2Q96T68 719 aa26.04■■□□□ 1.76
RBM42-204ENST00000589559 CAMTA2O94983 1202 aa26.03■■□□□ 1.76
RBM42-204ENST00000589559 HDGFL1Q5TGJ6 251 aa26.03■■□□□ 1.76
RBM42-204ENST00000589559 MYL6BP14649 208 aa26.02■■□□□ 1.76
RBM42-204ENST00000589559 NFIXQ14938 502 aa26.02■■□□□ 1.76
RBM42-204ENST00000589559 BCL2L12Q9HB09 334 aa26.02■■□□□ 1.76
RBM42-204ENST00000589559 DDX21Q9NR30 783 aaKnown RBP eCLIP26.02■■□□□ 1.76
RBM42-204ENST00000589559 DBF4Q9UBU7 674 aaPredicted RBP26.02■■□□□ 1.76
RBM42-204ENST00000589559 PIP4K2AP48426 406 aaPredicted RBP26.01■■□□□ 1.75
RBM42-204ENST00000589559 MYH16Q9H6N6 1097 aa26.01■■□□□ 1.75
RBM42-204ENST00000589559 SALL2Q9Y467 1007 aaPredicted RBP26.01■■□□□ 1.75
RBM42-204ENST00000589559 POLRMTO00411 1230 aaKnown RBP26■■□□□ 1.75
RBM42-204ENST00000589559 SERPINB2P05120 415 aa25.99■■□□□ 1.75
RBM42-204ENST00000589559 HYPKQ9NX55 129 aa25.99■■□□□ 1.75
RBM42-204ENST00000589559 MAP3K15Q6ZN16 1313 aa25.98■■□□□ 1.75
RBM42-204ENST00000589559 GOLGA2Q08379 1002 aa25.98■■□□□ 1.75
RBM42-204ENST00000589559 CCDC30Q5VVM6 783 aa25.98■■□□□ 1.75
RBM42-204ENST00000589559 PDZRN3Q9UPQ7 1066 aa25.98■■□□□ 1.75
RBM42-204ENST00000589559 CARMIL3Q8ND23 1372 aa25.97■■□□□ 1.75
RBM42-204ENST00000589559 TBC1D9BQ66K14 1250 aa25.97■■□□□ 1.75
RBM42-204ENST00000589559 MIER1Q8N108 512 aa25.97■■□□□ 1.75
RBM42-204ENST00000589559 NPHP1O15259 732 aa25.96■■□□□ 1.75
RBM42-204ENST00000589559 DDR1Q08345 913 aa25.96■■□□□ 1.75
RBM42-204ENST00000589559 PDIA6Q15084 440 aa25.96■■□□□ 1.75
RBM42-204ENST00000589559 BICDL1Q6ZP65 573 aa25.96■■□□□ 1.75
RBM42-204ENST00000589559 SCN7AQ01118 1682 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms