RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 SNRPA1P09661 255 aaKnown RBP23.12■■□□□ 1.29
H3F3B-207ENST00000589417 RFC4P35249 363 aa23.12■■□□□ 1.29
H3F3B-207ENST00000589417 MSL1Q68DK7 614 aa23.12■■□□□ 1.29
H3F3B-207ENST00000589417 GYS1P13807 737 aa23.11■■□□□ 1.29
H3F3B-207ENST00000589417 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
H3F3B-207ENST00000589417 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
H3F3B-207ENST00000589417 ZBTB1Q9Y2K1 713 aa23.11■■□□□ 1.29
H3F3B-207ENST00000589417 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
H3F3B-207ENST00000589417 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
H3F3B-207ENST00000589417 USP42Q9H9J4 1324 aaKnown RBP23.09■■□□□ 1.29
H3F3B-207ENST00000589417 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
H3F3B-207ENST00000589417 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
H3F3B-207ENST00000589417 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.29
H3F3B-207ENST00000589417 USP16Q9Y5T5 823 aa23.08■■□□□ 1.29
H3F3B-207ENST00000589417 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
H3F3B-207ENST00000589417 NARFQ9UHQ1 456 aa23.07■■□□□ 1.28
H3F3B-207ENST00000589417 MRS2Q9HD23 443 aa23.06■■□□□ 1.28
H3F3B-207ENST00000589417 CD2APQ9Y5K6 639 aa23.06■■□□□ 1.28
H3F3B-207ENST00000589417 COL15A1P39059 1388 aa23.05■■□□□ 1.28
H3F3B-207ENST00000589417 A0A087WZG4 1122 aa23.05■■□□□ 1.28
H3F3B-207ENST00000589417 APAF1O14727 1248 aa23.05■■□□□ 1.28
H3F3B-207ENST00000589417 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
H3F3B-207ENST00000589417 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
H3F3B-207ENST00000589417 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
H3F3B-207ENST00000589417 PRAMEF22A3QJZ6 481 aa23.04■■□□□ 1.28
H3F3B-207ENST00000589417 CHL1O00533 1208 aa23.04■■□□□ 1.28
H3F3B-207ENST00000589417 A1BGP04217 495 aa23.04■■□□□ 1.28
H3F3B-207ENST00000589417 MMP10P09238 476 aa23.04■■□□□ 1.28
H3F3B-207ENST00000589417 CANXP27824 592 aaKnown RBP23.04■■□□□ 1.28
H3F3B-207ENST00000589417 SRP68Q9UHB9 627 aaKnown RBP23.04■■□□□ 1.28
H3F3B-207ENST00000589417 ZPR1O75312 459 aa23.03■■□□□ 1.28
H3F3B-207ENST00000589417 TM4SF1P30408 202 aa23.02■■□□□ 1.28
H3F3B-207ENST00000589417 FKBP8Q14318 412 aa23.02■■□□□ 1.28
H3F3B-207ENST00000589417 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
H3F3B-207ENST00000589417 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
H3F3B-207ENST00000589417 USPL1Q5W0Q7 1092 aa23.01■■□□□ 1.27
H3F3B-207ENST00000589417 C4AP0C0L4 1744 aa23■■□□□ 1.27
H3F3B-207ENST00000589417 BCL2L12Q9HB09 334 aa23■■□□□ 1.27
H3F3B-207ENST00000589417 NBPF26B4DH59 902 aa22.99■■□□□ 1.27
H3F3B-207ENST00000589417 CCDC27Q2M243 656 aa22.99■■□□□ 1.27
H3F3B-207ENST00000589417 NBPF10Q6P3W6 841 aaKnown RBP22.99■■□□□ 1.27
H3F3B-207ENST00000589417 NBPF15Q8N660 670 aa22.99■■□□□ 1.27
H3F3B-207ENST00000589417 CFAP44Q96MT7 982 aa22.99■■□□□ 1.27
H3F3B-207ENST00000589417 RGL2O15211 777 aa22.98■■□□□ 1.27
H3F3B-207ENST00000589417 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
H3F3B-207ENST00000589417 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
H3F3B-207ENST00000589417 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
H3F3B-207ENST00000589417 PARP3Q9Y6F1 533 aa22.97■■□□□ 1.27
H3F3B-207ENST00000589417 DCAF8L1A6NGE4 600 aa22.96■■□□□ 1.27
H3F3B-207ENST00000589417 ERBB4Q15303 1308 aa22.96■■□□□ 1.27
H3F3B-207ENST00000589417 DDR1Q08345 913 aa22.95■■□□□ 1.26
H3F3B-207ENST00000589417 NPM2Q86SE8 214 aaKnown RBP22.95■■□□□ 1.26
H3F3B-207ENST00000589417 POLRMTO00411 1230 aaKnown RBP22.94■■□□□ 1.26
H3F3B-207ENST00000589417 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
H3F3B-207ENST00000589417 NFIXQ14938 502 aa22.94■■□□□ 1.26
H3F3B-207ENST00000589417 KLHL34Q8N239 644 aa22.94■■□□□ 1.26
H3F3B-207ENST00000589417 IFT57Q9NWB7 429 aa22.94■■□□□ 1.26
H3F3B-207ENST00000589417 TBC1D2BQ9UPU7 963 aa22.94■■□□□ 1.26
H3F3B-207ENST00000589417 TGFB2P61812 414 aa22.93■■□□□ 1.26
H3F3B-207ENST00000589417 CLEC4GQ6UXB4 293 aa22.93■■□□□ 1.26
H3F3B-207ENST00000589417 DZIP3Q86Y13 1208 aaKnown RBP22.93■■□□□ 1.26
H3F3B-207ENST00000589417 C10orf71Q711Q0 1435 aa22.92■■□□□ 1.26
H3F3B-207ENST00000589417 HOXB7P09629 217 aa22.92■■□□□ 1.26
H3F3B-207ENST00000589417 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
H3F3B-207ENST00000589417 GNAI1P63096 354 aa22.91■■□□□ 1.26
H3F3B-207ENST00000589417 WWC1Q8IX03 1113 aa22.9■■□□□ 1.26
H3F3B-207ENST00000589417 ZNF330Q9Y3S2 320 aaPredicted RBP22.9■■□□□ 1.26
H3F3B-207ENST00000589417 PDIA6Q15084 440 aa22.89■■□□□ 1.25
H3F3B-207ENST00000589417 LRP10Q7Z4F1 713 aa22.89■■□□□ 1.25
H3F3B-207ENST00000589417 NGEFQ8N5V2 710 aa22.89■■□□□ 1.25
H3F3B-207ENST00000589417 MBIPQ9NS73 344 aa22.89■■□□□ 1.25
H3F3B-207ENST00000589417 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
H3F3B-207ENST00000589417 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.25
H3F3B-207ENST00000589417 TBC1D9BQ66K14 1250 aa22.88■■□□□ 1.25
H3F3B-207ENST00000589417 ERVV-1B6SEH8 477 aa22.87■■□□□ 1.25
H3F3B-207ENST00000589417 SERPINB2P05120 415 aa22.87■■□□□ 1.25
H3F3B-207ENST00000589417 IL16Q14005 1332 aa22.86■■□□□ 1.25
H3F3B-207ENST00000589417 CCER2I3L3R5 266 aa22.86■■□□□ 1.25
H3F3B-207ENST00000589417 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
H3F3B-207ENST00000589417 KIF13BQ9NQT8 1826 aa22.86■■□□□ 1.25
H3F3B-207ENST00000589417 UTRNP46939 3433 aa22.86■■□□□ 1.25
H3F3B-207ENST00000589417 SCN7AQ01118 1682 aa22.85■■□□□ 1.25
H3F3B-207ENST00000589417 GPR162Q16538 588 aa22.85■■□□□ 1.25
H3F3B-207ENST00000589417 KRT24Q2M2I5 525 aa22.85■■□□□ 1.25
H3F3B-207ENST00000589417 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
H3F3B-207ENST00000589417 EIF2S2P20042 333 aaKnown RBP22.84■■□□□ 1.25
H3F3B-207ENST00000589417 FAM9BQ8IZU0 186 aa22.84■■□□□ 1.25
H3F3B-207ENST00000589417 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
H3F3B-207ENST00000589417 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
H3F3B-207ENST00000589417 NRXN2Q9P2S2 1712 aa22.83■■□□□ 1.25
H3F3B-207ENST00000589417 GRIN3BO60391 1043 aa22.83■■□□□ 1.25
H3F3B-207ENST00000589417 WDR63Q8IWG1 891 aa22.83■■□□□ 1.25
H3F3B-207ENST00000589417 DDX21Q9NR30 783 aaKnown RBP eCLIP22.83■■□□□ 1.25
H3F3B-207ENST00000589417 CARMIL3Q8ND23 1372 aa22.83■■□□□ 1.25
H3F3B-207ENST00000589417 MAP3K15Q6ZN16 1313 aa22.82■■□□□ 1.24
H3F3B-207ENST00000589417 YBX3P16989 372 aaKnown RBP eCLIP22.82■■□□□ 1.24
H3F3B-207ENST00000589417 KCNA3P22001 575 aa22.82■■□□□ 1.24
H3F3B-207ENST00000589417 DUSP27Q5VZP5 1158 aa22.82■■□□□ 1.24
H3F3B-207ENST00000589417 MYL6BP14649 208 aa22.81■■□□□ 1.24
H3F3B-207ENST00000589417 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 807.4 ms