RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 PXDNQ92626 1479 aa16.45■□□□□ 0.22
KDM4B-208ENST00000589104 HOXB7P09629 217 aa16.45■□□□□ 0.22
KDM4B-208ENST00000589104 REC8O95072 547 aa16.45■□□□□ 0.22
KDM4B-208ENST00000589104 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
KDM4B-208ENST00000589104 FOXO3O43524 673 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 COL15A1P39059 1388 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 ADCY9O60503 1353 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 MCM5P33992 734 aa16.44■□□□□ 0.22
KDM4B-208ENST00000589104 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
KDM4B-208ENST00000589104 AFDNP55196 1824 aaKnown RBP16.43■□□□□ 0.22
KDM4B-208ENST00000589104 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
KDM4B-208ENST00000589104 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
KDM4B-208ENST00000589104 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
KDM4B-208ENST00000589104 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
KDM4B-208ENST00000589104 TPM2P07951 284 aa16.42■□□□□ 0.22
KDM4B-208ENST00000589104 UNC5CLQ8IV45 518 aa16.42■□□□□ 0.22
KDM4B-208ENST00000589104 HOXC9P31274 260 aa16.42■□□□□ 0.22
KDM4B-208ENST00000589104 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
KDM4B-208ENST00000589104 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
KDM4B-208ENST00000589104 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
KDM4B-208ENST00000589104 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
KDM4B-208ENST00000589104 RAD50Q92878 1312 aa16.41■□□□□ 0.22
KDM4B-208ENST00000589104 GNAI2P04899 355 aa16.41■□□□□ 0.22
KDM4B-208ENST00000589104 FLIIQ13045 1269 aa16.4■□□□□ 0.22
KDM4B-208ENST00000589104 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
KDM4B-208ENST00000589104 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
KDM4B-208ENST00000589104 MX1P20591 662 aa16.4■□□□□ 0.22
KDM4B-208ENST00000589104 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
KDM4B-208ENST00000589104 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
KDM4B-208ENST00000589104 ALDH8A1Q9H2A2 487 aaPredicted RBP16.39■□□□□ 0.21
KDM4B-208ENST00000589104 ST18O60284 1047 aa16.39■□□□□ 0.21
KDM4B-208ENST00000589104 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
KDM4B-208ENST00000589104 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
KDM4B-208ENST00000589104 HMMRO75330 724 aa16.38■□□□□ 0.21
KDM4B-208ENST00000589104 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
KDM4B-208ENST00000589104 SGSM2O43147 1006 aa16.37■□□□□ 0.21
KDM4B-208ENST00000589104 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
KDM4B-208ENST00000589104 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
KDM4B-208ENST00000589104 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
KDM4B-208ENST00000589104 GNAI3P08754 354 aa16.36■□□□□ 0.21
KDM4B-208ENST00000589104 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
KDM4B-208ENST00000589104 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
KDM4B-208ENST00000589104 ZKSCAN5Q9Y2L8 839 aa16.36■□□□□ 0.21
KDM4B-208ENST00000589104 STRCP1A6NGW2 1772 aa16.35■□□□□ 0.21
KDM4B-208ENST00000589104 F6X3S4 739 aa16.35■□□□□ 0.21
KDM4B-208ENST00000589104 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.211e-6■■■■■ 28.5
KDM4B-208ENST00000589104 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
KDM4B-208ENST00000589104 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
KDM4B-208ENST00000589104 MBD3O95983 291 aa16.35■□□□□ 0.21
KDM4B-208ENST00000589104 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
KDM4B-208ENST00000589104 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
KDM4B-208ENST00000589104 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
KDM4B-208ENST00000589104 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.21
KDM4B-208ENST00000589104 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.21
KDM4B-208ENST00000589104 MED23Q9ULK4 1368 aa16.33■□□□□ 0.21
KDM4B-208ENST00000589104 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.2
KDM4B-208ENST00000589104 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
KDM4B-208ENST00000589104 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
KDM4B-208ENST00000589104 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
KDM4B-208ENST00000589104 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.2
KDM4B-208ENST00000589104 CHAMP1Q96JM3 812 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
KDM4B-208ENST00000589104 CAVIN1Q6NZI2 390 aaKnown RBP16.32■□□□□ 0.2
KDM4B-208ENST00000589104 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
KDM4B-208ENST00000589104 XIRP1Q702N8 1843 aaKnown RBP16.32■□□□□ 0.2
KDM4B-208ENST00000589104 GOLGA6L22H0YM25 854 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 UVSSAQ2YD98 709 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 RBM43Q6ZSC3 357 aaKnown RBP16.31■□□□□ 0.2
KDM4B-208ENST00000589104 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
KDM4B-208ENST00000589104 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
KDM4B-208ENST00000589104 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
KDM4B-208ENST00000589104 TSGA10IPQ3SY00 556 aa16.3■□□□□ 0.2
KDM4B-208ENST00000589104 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
KDM4B-208ENST00000589104 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
KDM4B-208ENST00000589104 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
KDM4B-208ENST00000589104 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
KDM4B-208ENST00000589104 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
KDM4B-208ENST00000589104 PRDM4Q9UKN5 801 aa16.29■□□□□ 0.2
KDM4B-208ENST00000589104 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
KDM4B-208ENST00000589104 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
KDM4B-208ENST00000589104 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
KDM4B-208ENST00000589104 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
KDM4B-208ENST00000589104 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
KDM4B-208ENST00000589104 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
KDM4B-208ENST00000589104 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
KDM4B-208ENST00000589104 IP6K1Q92551 441 aa16.28■□□□□ 0.2
KDM4B-208ENST00000589104 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
KDM4B-208ENST00000589104 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.19
KDM4B-208ENST00000589104 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.19
KDM4B-208ENST00000589104 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
KDM4B-208ENST00000589104 KDM6AO15550 1401 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms