RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NUP188Q5SRE5 1749 aa25.87■■□□□ 1.73
DNMT1-216ENST00000588952 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
DNMT1-216ENST00000588952 C4BP0C0L5 1744 aa25.85■■□□□ 1.73
DNMT1-216ENST00000588952 MYH14Q7Z406 1995 aaKnown RBP25.85■■□□□ 1.73
DNMT1-216ENST00000588952 A1BGP04217 495 aa25.84■■□□□ 1.73
DNMT1-216ENST00000588952 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
DNMT1-216ENST00000588952 HDGFL1Q5TGJ6 251 aa25.84■■□□□ 1.73
DNMT1-216ENST00000588952 TEX13AQ9BXU3 409 aaPredicted RBP25.84■■□□□ 1.73
DNMT1-216ENST00000588952 SOS1Q07889 1333 aaPredicted RBP25.84■■□□□ 1.73
DNMT1-216ENST00000588952 TCERG1O14776 1098 aaKnown RBP25.83■■□□□ 1.73
DNMT1-216ENST00000588952 CRKLP46109 303 aaKnown RBP25.83■■□□□ 1.73
DNMT1-216ENST00000588952 INTS5Q6P9B9 1019 aaKnown RBP25.83■■□□□ 1.73
DNMT1-216ENST00000588952 STARD3NLO95772 234 aa25.82■■□□□ 1.72
DNMT1-216ENST00000588952 NBPF26B4DH59 902 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 PROSER3Q2NL68 480 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 NBPF14Q5TI25 921 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 NBPF10Q6P3W6 841 aaKnown RBP25.81■■□□□ 1.72
DNMT1-216ENST00000588952 NBPF15Q8N660 670 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 ZBTB1Q9Y2K1 713 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 CNTNAP4Q9C0A0 1308 aa25.81■■□□□ 1.72
DNMT1-216ENST00000588952 PDIA6Q15084 440 aa25.8■■□□□ 1.72
DNMT1-216ENST00000588952 ZNF827Q17R98 1081 aa25.8■■□□□ 1.72
DNMT1-216ENST00000588952 ANO8Q9HCE9 1232 aaPredicted RBP25.8■■□□□ 1.72
DNMT1-216ENST00000588952 CCDC87Q9NVE4 849 aa25.8■■□□□ 1.72
DNMT1-216ENST00000588952 ANXA1P04083 346 aa25.79■■□□□ 1.72
DNMT1-216ENST00000588952 AMIGO3Q86WK7 504 aa25.79■■□□□ 1.72
DNMT1-216ENST00000588952 CHPF2Q9P2E5 772 aa25.79■■□□□ 1.72
DNMT1-216ENST00000588952 CT47B1P0C2W7 299 aaPredicted RBP25.78■■□□□ 1.72
DNMT1-216ENST00000588952 RC3H1Q5TC82 1133 aaKnown RBP25.78■■□□□ 1.72
DNMT1-216ENST00000588952 SMIM5Q71RC9 77 aa25.78■■□□□ 1.72
DNMT1-216ENST00000588952 AKT1S1Q96B36 256 aa25.78■■□□□ 1.72
DNMT1-216ENST00000588952 CCDC30Q5VVM6 783 aa25.77■■□□□ 1.72
DNMT1-216ENST00000588952 LRP10Q7Z4F1 713 aa25.77■■□□□ 1.72
DNMT1-216ENST00000588952 CANXP27824 592 aaKnown RBP25.76■■□□□ 1.71
DNMT1-216ENST00000588952 SSH1Q8WYL5 1049 aa25.76■■□□□ 1.71
DNMT1-216ENST00000588952 TUBGCP6Q96RT7 1819 aa25.76■■□□□ 1.71
DNMT1-216ENST00000588952 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
DNMT1-216ENST00000588952 ERBB4Q15303 1308 aa25.75■■□□□ 1.71
DNMT1-216ENST00000588952 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
DNMT1-216ENST00000588952 BCL2L13Q9BXK5 485 aa25.75■■□□□ 1.71
DNMT1-216ENST00000588952 GNPATO15228 680 aa25.74■■□□□ 1.71
DNMT1-216ENST00000588952 MYL6BP14649 208 aa25.74■■□□□ 1.71
DNMT1-216ENST00000588952 AK7Q96M32 723 aa25.74■■□□□ 1.71
DNMT1-216ENST00000588952 DDX21Q9NR30 783 aaKnown RBP eCLIP25.74■■□□□ 1.71
DNMT1-216ENST00000588952 MRPL50Q8N5N7 158 aaKnown RBP25.72■■□□□ 1.71
DNMT1-216ENST00000588952 ZNF428Q96B54 188 aa25.72■■□□□ 1.71
DNMT1-216ENST00000588952 DBF4Q9UBU7 674 aaPredicted RBP25.72■■□□□ 1.71
DNMT1-216ENST00000588952 RPS6KA4O75676 772 aa25.71■■□□□ 1.71
DNMT1-216ENST00000588952 EIF5P55010 431 aaKnown RBP25.71■■□□□ 1.71
DNMT1-216ENST00000588952 ALDH1L2Q3SY69 923 aa25.71■■□□□ 1.71
DNMT1-216ENST00000588952 G2E3Q7L622 706 aa25.71■■□□□ 1.71
DNMT1-216ENST00000588952 BCAR3O75815 825 aa25.7■■□□□ 1.7
DNMT1-216ENST00000588952 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
DNMT1-216ENST00000588952 IL6STP40189 918 aaPredicted RBP25.7■■□□□ 1.7
DNMT1-216ENST00000588952 STK31Q9BXU1 1019 aa25.7■■□□□ 1.7
DNMT1-216ENST00000588952 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
DNMT1-216ENST00000588952 SMC4Q9NTJ3 1288 aa25.69■■□□□ 1.7
DNMT1-216ENST00000588952 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
DNMT1-216ENST00000588952 ZNF330Q9Y3S2 320 aaPredicted RBP25.69■■□□□ 1.7
DNMT1-216ENST00000588952 COL15A1P39059 1388 aa25.69■■□□□ 1.7
DNMT1-216ENST00000588952 SOCS7O14512 581 aa25.68■■□□□ 1.7
DNMT1-216ENST00000588952 PHF14O94880 888 aa25.68■■□□□ 1.7
DNMT1-216ENST00000588952 SLC15A2Q16348 729 aa25.68■■□□□ 1.7
DNMT1-216ENST00000588952 CHMP4AQ9BY43 222 aa25.68■■□□□ 1.7
DNMT1-216ENST00000588952 STK32BQ9NY57 414 aa25.68■■□□□ 1.7
DNMT1-216ENST00000588952 RTCBQ9Y3I0 505 aaKnown RBP25.68■■□□□ 1.7
DNMT1-216ENST00000588952 C4AP0C0L4 1744 aa25.67■■□□□ 1.7
DNMT1-216ENST00000588952 TTLL7Q6ZT98 887 aa25.67■■□□□ 1.7
DNMT1-216ENST00000588952 XAGE3Q8WTP9 111 aa25.67■■□□□ 1.7
DNMT1-216ENST00000588952 HYPKQ9NX55 129 aa25.67■■□□□ 1.7
DNMT1-216ENST00000588952 TFCP2L1Q9NZI6 479 aa25.67■■□□□ 1.7
DNMT1-216ENST00000588952 HMGB2P26583 209 aaKnown RBP25.66■■□□□ 1.7
DNMT1-216ENST00000588952 QSER1Q2KHR3 1735 aa25.66■■□□□ 1.7
DNMT1-216ENST00000588952 PNPLA7Q6ZV29 1317 aa25.65■■□□□ 1.7
DNMT1-216ENST00000588952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.65■■□□□ 1.7
DNMT1-216ENST00000588952 COPS6Q7L5N1 327 aa25.65■■□□□ 1.7
DNMT1-216ENST00000588952 CACNA1FO60840 1977 aa25.65■■□□□ 1.7
DNMT1-216ENST00000588952 SSFA2P28290 1259 aa25.64■■□□□ 1.7
DNMT1-216ENST00000588952 AIMP1Q12904 312 aaKnown RBP25.64■■□□□ 1.7
DNMT1-216ENST00000588952 ARHGEF1Q92888 912 aaKnown RBP25.64■■□□□ 1.7
DNMT1-216ENST00000588952 BRPF1P55201 1214 aaPredicted RBP25.63■■□□□ 1.69
DNMT1-216ENST00000588952 FLIIQ13045 1269 aa25.63■■□□□ 1.69
DNMT1-216ENST00000588952 TBC1D2BQ9UPU7 963 aa25.63■■□□□ 1.69
DNMT1-216ENST00000588952 COL23A1Q86Y22 540 aaPredicted RBP25.62■■□□□ 1.69
DNMT1-216ENST00000588952 ADRA2BP18089 450 aa25.61■■□□□ 1.69
DNMT1-216ENST00000588952 TRAPPC3LQ5T215 181 aa25.61■■□□□ 1.69
DNMT1-216ENST00000588952 DZIP3Q86Y13 1208 aaKnown RBP25.61■■□□□ 1.69
DNMT1-216ENST00000588952 SRP68Q9UHB9 627 aaKnown RBP25.61■■□□□ 1.69
DNMT1-216ENST00000588952 BCORQ6W2J9 1755 aa25.61■■□□□ 1.69
DNMT1-216ENST00000588952 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
DNMT1-216ENST00000588952 NOB1Q9ULX3 412 aaKnown RBP25.6■■□□□ 1.69
DNMT1-216ENST00000588952 ADCY9O60503 1353 aa25.59■■□□□ 1.69
DNMT1-216ENST00000588952 A0A087WZG4 1122 aa25.59■■□□□ 1.69
DNMT1-216ENST00000588952 CAMTA2O94983 1202 aa25.59■■□□□ 1.69
DNMT1-216ENST00000588952 ARXQ96QS3 562 aa25.59■■□□□ 1.69
DNMT1-216ENST00000588952 PDGFDQ9GZP0 370 aaPredicted RBP25.59■■□□□ 1.69
DNMT1-216ENST00000588952 ZBTB3Q9H5J0 574 aa25.58■■□□□ 1.69
DNMT1-216ENST00000588952 TNNQ9UQP3 1299 aa25.58■■□□□ 1.69
DNMT1-216ENST00000588952 MAP3K15Q6ZN16 1313 aa25.58■■□□□ 1.69
DNMT1-216ENST00000588952 USP42Q9H9J4 1324 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms