RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.53
CLPTM1-209ENST00000588855 HMGB2P26583 209 aaKnown RBP24.63■■□□□ 1.53
CLPTM1-209ENST00000588855 CDCA7LQ96GN5 454 aa24.62■■□□□ 1.53
CLPTM1-209ENST00000588855 STARD3NLO95772 234 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 AMIGO3Q86WK7 504 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 ZBED9Q6R2W3 1325 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 GNPATO15228 680 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 R3HDM1Q15032 1099 aaKnown RBP24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 RC3H1Q5TC82 1133 aaKnown RBP24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 INTS5Q6P9B9 1019 aaKnown RBP24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 CCDC87Q9NVE4 849 aa24.61■■□□□ 1.53
CLPTM1-209ENST00000588855 E9PSI1 815 aa24.6■■□□□ 1.53
CLPTM1-209ENST00000588855 SLFN5Q08AF3 891 aa24.6■■□□□ 1.53
CLPTM1-209ENST00000588855 C8orf58Q8NAV2 365 aa24.6■■□□□ 1.53
CLPTM1-209ENST00000588855 TFCP2L1Q9NZI6 479 aa24.6■■□□□ 1.53
CLPTM1-209ENST00000588855 ZBTB1Q9Y2K1 713 aa24.6■■□□□ 1.53
CLPTM1-209ENST00000588855 PSDA5PKW4 1024 aaPredicted RBP24.59■■□□□ 1.53
CLPTM1-209ENST00000588855 DUSP27Q5VZP5 1158 aa24.59■■□□□ 1.53
CLPTM1-209ENST00000588855 SMIM5Q71RC9 77 aa24.59■■□□□ 1.53
CLPTM1-209ENST00000588855 C4AP0C0L4 1744 aa24.58■■□□□ 1.53
CLPTM1-209ENST00000588855 ELL2O00472 640 aaPredicted RBP24.58■■□□□ 1.53
CLPTM1-209ENST00000588855 A1BGP04217 495 aa24.58■■□□□ 1.53
CLPTM1-209ENST00000588855 CASZ1Q86V15 1759 aa24.57■■□□□ 1.52
CLPTM1-209ENST00000588855 TSPYL6Q8N831 410 aa24.57■■□□□ 1.52
CLPTM1-209ENST00000588855 PNPLA7Q6ZV29 1317 aa24.57■■□□□ 1.52
CLPTM1-209ENST00000588855 PHF14O94880 888 aa24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 HOXB7P09629 217 aa24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 EIF2S2P20042 333 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 PIP4K2AP48426 406 aaPredicted RBP24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 EXOSC9Q06265 439 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 RPS6KA4O75676 772 aa24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 CANXP27824 592 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 RTCBQ9Y3I0 505 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-209ENST00000588855 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
CLPTM1-209ENST00000588855 SOS1Q07889 1333 aaPredicted RBP24.55■■□□□ 1.52
CLPTM1-209ENST00000588855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-209ENST00000588855 SSFA2P28290 1259 aa24.54■■□□□ 1.52
CLPTM1-209ENST00000588855 TRMT2AQ8IZ69 625 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-209ENST00000588855 PDGFDQ9GZP0 370 aaPredicted RBP24.54■■□□□ 1.52
CLPTM1-209ENST00000588855 NBPF26B4DH59 902 aa24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 TWISTNBQ3B726 338 aaPredicted RBP24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 HDGFL1Q5TGJ6 251 aa24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 NBPF10Q6P3W6 841 aaKnown RBP24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 NBPF15Q8N660 670 aa24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 YTHDC1Q96MU7 727 aaKnown RBP24.53■■□□□ 1.52
CLPTM1-209ENST00000588855 COL15A1P39059 1388 aa24.52■■□□□ 1.52
CLPTM1-209ENST00000588855 COL23A1Q86Y22 540 aaPredicted RBP24.51■■□□□ 1.51
CLPTM1-209ENST00000588855 ERBB4Q15303 1308 aa24.51■■□□□ 1.51
CLPTM1-209ENST00000588855 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
CLPTM1-209ENST00000588855 EIF5P55010 431 aaKnown RBP24.51■■□□□ 1.51
CLPTM1-209ENST00000588855 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
CLPTM1-209ENST00000588855 ANXA1P04083 346 aa24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 ADRA2BP18089 450 aa24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 PDIA6Q15084 440 aa24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 TRAPPC3LQ5T215 181 aa24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 FLAD1Q8NFF5 587 aa24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 ARHGEF1Q92888 912 aaKnown RBP24.49■■□□□ 1.51
CLPTM1-209ENST00000588855 MSH5O43196 834 aa24.48■■□□□ 1.51
CLPTM1-209ENST00000588855 MYL6BP14649 208 aa24.48■■□□□ 1.51
CLPTM1-209ENST00000588855 PROSER3Q2NL68 480 aa24.48■■□□□ 1.51
CLPTM1-209ENST00000588855 CHPF2Q9P2E5 772 aa24.48■■□□□ 1.51
CLPTM1-209ENST00000588855 VAMP4O75379 141 aa24.47■■□□□ 1.51
CLPTM1-209ENST00000588855 SCN7AQ01118 1682 aa24.47■■□□□ 1.51
CLPTM1-209ENST00000588855 BCORQ6W2J9 1755 aa24.47■■□□□ 1.51
CLPTM1-209ENST00000588855 LRP10Q7Z4F1 713 aa24.45■■□□□ 1.51
CLPTM1-209ENST00000588855 RFC4P35249 363 aa24.45■■□□□ 1.5
CLPTM1-209ENST00000588855 DDX21Q9NR30 783 aaKnown RBP eCLIP24.45■■□□□ 1.5
CLPTM1-209ENST00000588855 TCERG1O14776 1098 aaKnown RBP24.44■■□□□ 1.5
CLPTM1-209ENST00000588855 CCDC30Q5VVM6 783 aa24.44■■□□□ 1.5
CLPTM1-209ENST00000588855 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
CLPTM1-209ENST00000588855 SRP68Q9UHB9 627 aaKnown RBP24.44■■□□□ 1.5
CLPTM1-209ENST00000588855 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
CLPTM1-209ENST00000588855 CACNA1FO60840 1977 aa24.43■■□□□ 1.5
CLPTM1-209ENST00000588855 USP42Q9H9J4 1324 aaKnown RBP24.43■■□□□ 1.5
CLPTM1-209ENST00000588855 A0A087WZG4 1122 aa24.42■■□□□ 1.5
CLPTM1-209ENST00000588855 TBC1D2BQ9UPU7 963 aa24.42■■□□□ 1.5
CLPTM1-209ENST00000588855 ZBTB7AO95365 584 aa24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 DZIP3Q86Y13 1208 aaKnown RBP24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 ARXQ96QS3 562 aa24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 CHMP4AQ9BY43 222 aa24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 COL24A1Q17RW2 1714 aa24.41■■□□□ 1.5
CLPTM1-209ENST00000588855 USPL1Q5W0Q7 1092 aa24.4■■□□□ 1.5
CLPTM1-209ENST00000588855 TTLL7Q6ZT98 887 aa24.4■■□□□ 1.5
CLPTM1-209ENST00000588855 SLC16A10Q8TF71 515 aa24.4■■□□□ 1.5
CLPTM1-209ENST00000588855 STK31Q9BXU1 1019 aa24.4■■□□□ 1.5
CLPTM1-209ENST00000588855 ZPR1O75312 459 aa24.39■■□□□ 1.49
CLPTM1-209ENST00000588855 MSL1Q68DK7 614 aa24.39■■□□□ 1.49
CLPTM1-209ENST00000588855 HYPKQ9NX55 129 aa24.39■■□□□ 1.49
CLPTM1-209ENST00000588855 GYS1P13807 737 aa24.38■■□□□ 1.49
CLPTM1-209ENST00000588855 XAGE3Q8WTP9 111 aa24.38■■□□□ 1.49
CLPTM1-209ENST00000588855 NUP98P52948 1817 aa24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 CAMTA2O94983 1202 aa24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 AIMP1Q12904 312 aaKnown RBP24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 COPS6Q7L5N1 327 aa24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 MTFR1LQ9H019 292 aa24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 PHAXQ9H814 394 aaKnown RBP24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 BCL2L12Q9HB09 334 aa24.37■■□□□ 1.49
CLPTM1-209ENST00000588855 SLC4A2P04920 1241 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 428.1 ms