RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
CHMP1B-202ENST00000588284 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 INTS3Q68E01 1043 aaKnown RBP13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 TNNQ9UQP3 1299 aa13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 ABCC4O15439 1325 aa13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
CHMP1B-202ENST00000588284 FLIIQ13045 1269 aa13.29□□□□□ -0.28
CHMP1B-202ENST00000588284 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
CHMP1B-202ENST00000588284 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
CHMP1B-202ENST00000588284 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
CHMP1B-202ENST00000588284 TNS2Q63HR2 1409 aa13.29□□□□□ -0.28
CHMP1B-202ENST00000588284 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 FKBP5Q13451 457 aaPredicted RBP13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 DDX21Q9NR30 783 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 AFF2P51816 1311 aa13.28□□□□□ -0.28
CHMP1B-202ENST00000588284 ZBTB7BO15156 539 aaPredicted RBP13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 CENPQQ7L2Z9 268 aaPredicted RBP13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 G2E3Q7L622 706 aa13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 PIGBQ92521 554 aa13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 ERBB4Q15303 1308 aa13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 LRP6O75581 1613 aa13.27□□□□□ -0.29
CHMP1B-202ENST00000588284 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
CHMP1B-202ENST00000588284 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
CHMP1B-202ENST00000588284 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
CHMP1B-202ENST00000588284 CHPF2Q9P2E5 772 aa13.26□□□□□ -0.29
CHMP1B-202ENST00000588284 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
CHMP1B-202ENST00000588284 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
CHMP1B-202ENST00000588284 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
CHMP1B-202ENST00000588284 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
CHMP1B-202ENST00000588284 A0A0G2JS52 829 aa13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 MYT1Q01538 1121 aa13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 PROM2Q8N271 834 aa13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
CHMP1B-202ENST00000588284 BCL9O00512 1426 aa13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 HDAC5Q9UQL6 1122 aa13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
CHMP1B-202ENST00000588284 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 STARD3NLO95772 234 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 GNAI3P08754 354 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 PDIA6Q15084 440 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 PCDHB15Q9Y5E8 787 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 ATRNO75882 1429 aa13.22□□□□□ -0.29
CHMP1B-202ENST00000588284 PI4KAP2A4QPH2 592 aa13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 F6X3S4 739 aa13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 PI4KAP1Q8N8J0 262 aa13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
CHMP1B-202ENST00000588284 RGS12O14924 1447 aa13.21□□□□□ -0.3
CHMP1B-202ENST00000588284 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
CHMP1B-202ENST00000588284 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
CHMP1B-202ENST00000588284 RPAP2Q8IXW5 612 aaPredicted RBP13.2□□□□□ -0.3
CHMP1B-202ENST00000588284 IGHDP01880 384 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 ANXA1P04083 346 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 MYL6BP14649 208 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 NEXNQ0ZGT2 675 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
CHMP1B-202ENST00000588284 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 SEPT12Q8IYM1 358 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 ACSBG1Q96GR2 724 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
CHMP1B-202ENST00000588284 GNAI2P04899 355 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 POTEHQ6S545 545 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 KCPQ6ZWJ8 1503 aa13.17□□□□□ -0.3
CHMP1B-202ENST00000588284 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 ITGB4P16144 1822 aa13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 A1BGP04217 495 aa13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
CHMP1B-202ENST00000588284 LRP10Q7Z4F1 713 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms