RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 ZNF853P0CG23 659 aa21.74■■□□□ 1.07
GFAP-205ENST00000585543 MYH16Q9H6N6 1097 aa21.74■■□□□ 1.07
GFAP-205ENST00000585543 CYP19A1P11511 503 aaPredicted RBP21.73■■□□□ 1.07
GFAP-205ENST00000585543 SSFA2P28290 1259 aa21.73■■□□□ 1.07
GFAP-205ENST00000585543 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
GFAP-205ENST00000585543 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
GFAP-205ENST00000585543 PHF14O94880 888 aa21.72■■□□□ 1.07
GFAP-205ENST00000585543 CHMP4AQ9BY43 222 aa21.72■■□□□ 1.07
GFAP-205ENST00000585543 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
GFAP-205ENST00000585543 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
GFAP-205ENST00000585543 ADRA2BP18089 450 aa21.71■■□□□ 1.07
GFAP-205ENST00000585543 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
GFAP-205ENST00000585543 HOXB7P09629 217 aa21.69■■□□□ 1.06
GFAP-205ENST00000585543 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
GFAP-205ENST00000585543 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
GFAP-205ENST00000585543 USP16Q9Y5T5 823 aa21.69■■□□□ 1.06
GFAP-205ENST00000585543 PNPLA7Q6ZV29 1317 aa21.69■■□□□ 1.06
GFAP-205ENST00000585543 CASZ1Q86V15 1759 aa21.69■■□□□ 1.06
GFAP-205ENST00000585543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.68■■□□□ 1.06
GFAP-205ENST00000585543 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
GFAP-205ENST00000585543 ZBTB1Q9Y2K1 713 aa21.68■■□□□ 1.06
GFAP-205ENST00000585543 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
GFAP-205ENST00000585543 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
GFAP-205ENST00000585543 ERBB4Q15303 1308 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 ZNF521Q96K83 1311 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 FANCIQ9NVI1 1328 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 A0A087WZG4 1122 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 PRAMEF22A3QJZ6 481 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 E9PSI1 815 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 INTS5Q6P9B9 1019 aaKnown RBP21.67■■□□□ 1.06
GFAP-205ENST00000585543 SLC16A10Q8TF71 515 aa21.67■■□□□ 1.06
GFAP-205ENST00000585543 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
GFAP-205ENST00000585543 RFC4P35249 363 aa21.66■■□□□ 1.06
GFAP-205ENST00000585543 DUSP27Q5VZP5 1158 aa21.66■■□□□ 1.06
GFAP-205ENST00000585543 COL15A1P39059 1388 aa21.65■■□□□ 1.06
GFAP-205ENST00000585543 A1BGP04217 495 aa21.65■■□□□ 1.06
GFAP-205ENST00000585543 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
GFAP-205ENST00000585543 C4AP0C0L4 1744 aa21.65■■□□□ 1.06
GFAP-205ENST00000585543 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
GFAP-205ENST00000585543 COL23A1Q86Y22 540 aaPredicted RBP21.64■■□□□ 1.05
GFAP-205ENST00000585543 KRT24Q2M2I5 525 aa21.63■■□□□ 1.05
GFAP-205ENST00000585543 ARXQ96QS3 562 aa21.63■■□□□ 1.05
GFAP-205ENST00000585543 ZPR1O75312 459 aa21.62■■□□□ 1.05
GFAP-205ENST00000585543 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
GFAP-205ENST00000585543 MTFR1LQ9H019 292 aa21.62■■□□□ 1.05
GFAP-205ENST00000585543 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
GFAP-205ENST00000585543 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
GFAP-205ENST00000585543 ZBTB7AO95365 584 aa21.6■■□□□ 1.05
GFAP-205ENST00000585543 EIF5P55010 431 aaKnown RBP21.6■■□□□ 1.05
GFAP-205ENST00000585543 CCDC30Q5VVM6 783 aa21.6■■□□□ 1.05
GFAP-205ENST00000585543 C8orf58Q8NAV2 365 aa21.6■■□□□ 1.05
GFAP-205ENST00000585543 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
GFAP-205ENST00000585543 SPON1Q9HCB6 807 aa21.6■■□□□ 1.05
GFAP-205ENST00000585543 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
GFAP-205ENST00000585543 MYL6BP14649 208 aa21.59■■□□□ 1.05
GFAP-205ENST00000585543 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
GFAP-205ENST00000585543 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
GFAP-205ENST00000585543 STK31Q9BXU1 1019 aa21.59■■□□□ 1.05
GFAP-205ENST00000585543 POLD1P28340 1107 aa21.58■■□□□ 1.05
GFAP-205ENST00000585543 EXOSC9Q06265 439 aaKnown RBP21.58■■□□□ 1.05
GFAP-205ENST00000585543 SMIM5Q71RC9 77 aa21.58■■□□□ 1.05
GFAP-205ENST00000585543 AMIGO3Q86WK7 504 aa21.58■■□□□ 1.05
GFAP-205ENST00000585543 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.05
GFAP-205ENST00000585543 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
GFAP-205ENST00000585543 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
GFAP-205ENST00000585543 USP42Q9H9J4 1324 aaKnown RBP21.57■■□□□ 1.04
GFAP-205ENST00000585543 KIF6Q6ZMV9 814 aa21.57■■□□□ 1.04
GFAP-205ENST00000585543 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
GFAP-205ENST00000585543 DDX21Q9NR30 783 aaKnown RBP eCLIP21.57■■□□□ 1.04
GFAP-205ENST00000585543 NARFQ9UHQ1 456 aa21.57■■□□□ 1.04
GFAP-205ENST00000585543 SCN7AQ01118 1682 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
GFAP-205ENST00000585543 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 CHPF2Q9P2E5 772 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 ATF5Q9Y2D1 282 aaPredicted RBP21.56■■□□□ 1.04
GFAP-205ENST00000585543 ZNF652Q9Y2D9 606 aa21.56■■□□□ 1.04
GFAP-205ENST00000585543 TSPYL6Q8N831 410 aa21.55■■□□□ 1.04
GFAP-205ENST00000585543 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
GFAP-205ENST00000585543 BCORQ6W2J9 1755 aa21.55■■□□□ 1.04
GFAP-205ENST00000585543 CACNA1FO60840 1977 aa21.55■■□□□ 1.04
GFAP-205ENST00000585543 LRP5O75197 1615 aa21.55■■□□□ 1.04
GFAP-205ENST00000585543 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
GFAP-205ENST00000585543 MSL1Q68DK7 614 aa21.54■■□□□ 1.04
GFAP-205ENST00000585543 CDCA7LQ96GN5 454 aa21.54■■□□□ 1.04
GFAP-205ENST00000585543 SRP68Q9UHB9 627 aaKnown RBP21.54■■□□□ 1.04
GFAP-205ENST00000585543 TBC1D2BQ9UPU7 963 aa21.54■■□□□ 1.04
GFAP-205ENST00000585543 PPP1R1BQ9UD71 204 aaPredicted RBP21.53■■□□□ 1.04
GFAP-205ENST00000585543 GYS1P13807 737 aa21.52■■□□□ 1.04
GFAP-205ENST00000585543 COL24A1Q17RW2 1714 aa21.52■■□□□ 1.03
GFAP-205ENST00000585543 RGL2O15211 777 aa21.5■■□□□ 1.03
GFAP-205ENST00000585543 VAMP4O75379 141 aa21.5■■□□□ 1.03
GFAP-205ENST00000585543 ANXA1P04083 346 aa21.5■■□□□ 1.03
GFAP-205ENST00000585543 CT47B1P0C2W7 299 aaPredicted RBP21.5■■□□□ 1.03
GFAP-205ENST00000585543 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
GFAP-205ENST00000585543 PDIA6Q15084 440 aa21.5■■□□□ 1.03
GFAP-205ENST00000585543 ZNF428Q96B54 188 aa21.5■■□□□ 1.03
GFAP-205ENST00000585543 DDX58O95786 925 aaKnown RBP21.49■■□□□ 1.03
GFAP-205ENST00000585543 PROSER3Q2NL68 480 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms