RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
ATG4D-202ENST00000585437 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
ATG4D-202ENST00000585437 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 BTBD11A6QL63 1104 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 NEFMP07197 916 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
ATG4D-202ENST00000585437 NUP98P52948 1817 aa11.42□□□□□ -0.58
ATG4D-202ENST00000585437 KCNQ3O43525 872 aa11.42□□□□□ -0.58
ATG4D-202ENST00000585437 GYS1P13807 737 aa11.42□□□□□ -0.58
ATG4D-202ENST00000585437 FMNL2Q96PY5 1086 aa11.42□□□□□ -0.58
ATG4D-202ENST00000585437 ANKRD36CQ5JPF3 1778 aa11.41□□□□□ -0.58
ATG4D-202ENST00000585437 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
ATG4D-202ENST00000585437 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
ATG4D-202ENST00000585437 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
ATG4D-202ENST00000585437 RFC4P35249 363 aa11.4□□□□□ -0.58
ATG4D-202ENST00000585437 TMPOP42166 694 aaKnown RBP11.4□□□□□ -0.58
ATG4D-202ENST00000585437 EIF5P55010 431 aaKnown RBP11.4□□□□□ -0.58
ATG4D-202ENST00000585437 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.58
ATG4D-202ENST00000585437 TAF7Q15545 349 aaPredicted RBP11.4□□□□□ -0.58
ATG4D-202ENST00000585437 NLGN1Q8N2Q7 840 aa11.4□□□□□ -0.58
ATG4D-202ENST00000585437 NLGN2Q8NFZ4 835 aa11.4□□□□□ -0.58
ATG4D-202ENST00000585437 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
ATG4D-202ENST00000585437 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.58
ATG4D-202ENST00000585437 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
ATG4D-202ENST00000585437 STARD3NLO95772 234 aa11.39□□□□□ -0.59
ATG4D-202ENST00000585437 MIER1Q8N108 512 aa11.39□□□□□ -0.59
ATG4D-202ENST00000585437 RUNDC1Q96C34 613 aa11.39□□□□□ -0.59
ATG4D-202ENST00000585437 THUMPD2Q9BTF0 503 aaKnown RBP11.39□□□□□ -0.59
ATG4D-202ENST00000585437 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 MMP10P09238 476 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
ATG4D-202ENST00000585437 RIPK4P57078 832 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 CCDC146Q8IYE0 955 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
ATG4D-202ENST00000585437 SRP68Q9UHB9 627 aaKnown RBP11.38□□□□□ -0.59
ATG4D-202ENST00000585437 NARFQ9UHQ1 456 aa11.38□□□□□ -0.59
ATG4D-202ENST00000585437 SNRPA1P09661 255 aaKnown RBP11.37□□□□□ -0.59
ATG4D-202ENST00000585437 FKBP8Q14318 412 aa11.37□□□□□ -0.59
ATG4D-202ENST00000585437 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
ATG4D-202ENST00000585437 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
ATG4D-202ENST00000585437 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
ATG4D-202ENST00000585437 CACNA1SQ13698 1873 aa11.37□□□□□ -0.59
ATG4D-202ENST00000585437 CANXP27824 592 aaKnown RBP11.36□□□□□ -0.59
ATG4D-202ENST00000585437 TM4SF1P30408 202 aa11.36□□□□□ -0.59
ATG4D-202ENST00000585437 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
ATG4D-202ENST00000585437 DDR1Q08345 913 aa11.36□□□□□ -0.59
ATG4D-202ENST00000585437 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
ATG4D-202ENST00000585437 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
ATG4D-202ENST00000585437 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
ATG4D-202ENST00000585437 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
ATG4D-202ENST00000585437 A1BGP04217 495 aa11.35□□□□□ -0.59
ATG4D-202ENST00000585437 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
ATG4D-202ENST00000585437 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
ATG4D-202ENST00000585437 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
ATG4D-202ENST00000585437 A0A087WZG4 1122 aa11.34□□□□□ -0.59
ATG4D-202ENST00000585437 NBPF26B4DH59 902 aa11.34□□□□□ -0.59
ATG4D-202ENST00000585437 ZPR1O75312 459 aa11.34□□□□□ -0.59
ATG4D-202ENST00000585437 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
ATG4D-202ENST00000585437 NBPF15Q8N660 670 aa11.34□□□□□ -0.59
ATG4D-202ENST00000585437 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
ATG4D-202ENST00000585437 RGL2O15211 777 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 ANP32CO43423 234 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 CAMTA2O94983 1202 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 NFIXQ14938 502 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 SBF1O95248 1867 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
ATG4D-202ENST00000585437 LAMB2P55268 1798 aa11.32□□□□□ -0.6
ATG4D-202ENST00000585437 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
ATG4D-202ENST00000585437 CHL1O00533 1208 aa11.32□□□□□ -0.6
ATG4D-202ENST00000585437 APAF1O14727 1248 aa11.32□□□□□ -0.6
ATG4D-202ENST00000585437 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATG4D-202ENST00000585437 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
ATG4D-202ENST00000585437 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
ATG4D-202ENST00000585437 TGFB2P61812 414 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 ATP10DQ9P241 1426 aa11.31□□□□□ -0.6
ATG4D-202ENST00000585437 FER1L6Q2WGJ9 1857 aa11.3□□□□□ -0.6
ATG4D-202ENST00000585437 CCDC88AQ3V6T2 1871 aa11.3□□□□□ -0.6
ATG4D-202ENST00000585437 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
ATG4D-202ENST00000585437 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
ATG4D-202ENST00000585437 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
ATG4D-202ENST00000585437 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
ATG4D-202ENST00000585437 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
ATG4D-202ENST00000585437 KCNA3P22001 575 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 GPR162Q16538 588 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
ATG4D-202ENST00000585437 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
ATG4D-202ENST00000585437 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms