RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
MKS1-213ENST00000585134 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
MKS1-213ENST00000585134 CHL1O00533 1208 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
MKS1-213ENST00000585134 SSFA2P28290 1259 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
MKS1-213ENST00000585134 MSL1Q68DK7 614 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 TEX13AQ9BXU3 409 aaPredicted RBP18.43■□□□□ 0.54
MKS1-213ENST00000585134 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
MKS1-213ENST00000585134 C4AP0C0L4 1744 aa18.43■□□□□ 0.54
MKS1-213ENST00000585134 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 GNAI1P63096 354 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 KRT24Q2M2I5 525 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
MKS1-213ENST00000585134 USP16Q9Y5T5 823 aa18.42■□□□□ 0.54
MKS1-213ENST00000585134 A1BGP04217 495 aa18.41■□□□□ 0.54
MKS1-213ENST00000585134 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
MKS1-213ENST00000585134 COL15A1P39059 1388 aa18.41■□□□□ 0.54
MKS1-213ENST00000585134 GIGYF1O75420 1035 aaPredicted RBP18.4■□□□□ 0.54
MKS1-213ENST00000585134 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
MKS1-213ENST00000585134 TSR2Q969E8 191 aaKnown RBP18.4■□□□□ 0.54
MKS1-213ENST00000585134 LRP5O75197 1615 aa18.39■□□□□ 0.53
MKS1-213ENST00000585134 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
MKS1-213ENST00000585134 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
MKS1-213ENST00000585134 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
MKS1-213ENST00000585134 ADRA2BP18089 450 aa18.38■□□□□ 0.53
MKS1-213ENST00000585134 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
MKS1-213ENST00000585134 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
MKS1-213ENST00000585134 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
MKS1-213ENST00000585134 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
MKS1-213ENST00000585134 SRP68Q9UHB9 627 aaKnown RBP18.38■□□□□ 0.53
MKS1-213ENST00000585134 RFC4P35249 363 aa18.37■□□□□ 0.53
MKS1-213ENST00000585134 IL16Q14005 1332 aa18.37■□□□□ 0.53
MKS1-213ENST00000585134 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
MKS1-213ENST00000585134 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
MKS1-213ENST00000585134 SLC16A10Q8TF71 515 aa18.36■□□□□ 0.53
MKS1-213ENST00000585134 ARXQ96QS3 562 aa18.36■□□□□ 0.53
MKS1-213ENST00000585134 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
MKS1-213ENST00000585134 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
MKS1-213ENST00000585134 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
MKS1-213ENST00000585134 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
MKS1-213ENST00000585134 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
MKS1-213ENST00000585134 MYL6BP14649 208 aa18.34■□□□□ 0.53
MKS1-213ENST00000585134 IL6STP40189 918 aaPredicted RBP18.34■□□□□ 0.53
MKS1-213ENST00000585134 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
MKS1-213ENST00000585134 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
MKS1-213ENST00000585134 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
MKS1-213ENST00000585134 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
MKS1-213ENST00000585134 PPP1R1BQ9UD71 204 aaPredicted RBP18.34■□□□□ 0.53
MKS1-213ENST00000585134 SCN7AQ01118 1682 aa18.34■□□□□ 0.53
MKS1-213ENST00000585134 ZNF521Q96K83 1311 aa18.33■□□□□ 0.53
MKS1-213ENST00000585134 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
MKS1-213ENST00000585134 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
MKS1-213ENST00000585134 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
MKS1-213ENST00000585134 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.52
MKS1-213ENST00000585134 A0A087WZG4 1122 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 ZPR1O75312 459 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 ANXA1P04083 346 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 POLD1P28340 1107 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
MKS1-213ENST00000585134 GYS1P13807 737 aa18.31■□□□□ 0.52
MKS1-213ENST00000585134 PTGER2P43116 358 aa18.31■□□□□ 0.52
MKS1-213ENST00000585134 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
MKS1-213ENST00000585134 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
MKS1-213ENST00000585134 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
MKS1-213ENST00000585134 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
MKS1-213ENST00000585134 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
MKS1-213ENST00000585134 PROSER3Q2NL68 480 aa18.3■□□□□ 0.52
MKS1-213ENST00000585134 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
MKS1-213ENST00000585134 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 HOXB7P09629 217 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 FKBP8Q14318 412 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 SGIP1Q9BQI5 828 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
MKS1-213ENST00000585134 MMP10P09238 476 aa18.28■□□□□ 0.52
MKS1-213ENST00000585134 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
MKS1-213ENST00000585134 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
MKS1-213ENST00000585134 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
MKS1-213ENST00000585134 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
MKS1-213ENST00000585134 E9PSI1 815 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
MKS1-213ENST00000585134 PDIA6Q15084 440 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 KIF6Q6ZMV9 814 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
MKS1-213ENST00000585134 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
MKS1-213ENST00000585134 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
MKS1-213ENST00000585134 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
MKS1-213ENST00000585134 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
MKS1-213ENST00000585134 DDR1Q08345 913 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms