RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
GGA3-216ENST00000583282 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
GGA3-216ENST00000583282 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
GGA3-216ENST00000583282 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
GGA3-216ENST00000583282 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
GGA3-216ENST00000583282 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
GGA3-216ENST00000583282 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
GGA3-216ENST00000583282 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
GGA3-216ENST00000583282 E9PSI1 815 aa18.17■□□□□ 0.5
GGA3-216ENST00000583282 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
GGA3-216ENST00000583282 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
GGA3-216ENST00000583282 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
GGA3-216ENST00000583282 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
GGA3-216ENST00000583282 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
GGA3-216ENST00000583282 ZNF330Q9Y3S2 320 aaPredicted RBP18.17■□□□□ 0.5
GGA3-216ENST00000583282 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
GGA3-216ENST00000583282 STARD3NLO95772 234 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
GGA3-216ENST00000583282 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 DUSP27Q5VZP5 1158 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 AMIGO3Q86WK7 504 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 TFCP2L1Q9NZI6 479 aa18.16■□□□□ 0.5
GGA3-216ENST00000583282 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
GGA3-216ENST00000583282 A1BGP04217 495 aa18.15■□□□□ 0.5
GGA3-216ENST00000583282 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
GGA3-216ENST00000583282 EXOSC9Q06265 439 aaKnown RBP18.15■□□□□ 0.5
GGA3-216ENST00000583282 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
GGA3-216ENST00000583282 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
GGA3-216ENST00000583282 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
GGA3-216ENST00000583282 TEX13AQ9BXU3 409 aaPredicted RBP18.14■□□□□ 0.49
GGA3-216ENST00000583282 COL15A1P39059 1388 aa18.14■□□□□ 0.49
GGA3-216ENST00000583282 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
GGA3-216ENST00000583282 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
GGA3-216ENST00000583282 INTS5Q6P9B9 1019 aaKnown RBP18.13■□□□□ 0.49
GGA3-216ENST00000583282 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
GGA3-216ENST00000583282 MSH5O43196 834 aa18.12■□□□□ 0.49
GGA3-216ENST00000583282 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
GGA3-216ENST00000583282 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
GGA3-216ENST00000583282 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
GGA3-216ENST00000583282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
GGA3-216ENST00000583282 ANXA1P04083 346 aa18.11■□□□□ 0.49
GGA3-216ENST00000583282 HOXB7P09629 217 aa18.11■□□□□ 0.49
GGA3-216ENST00000583282 RC3H1Q5TC82 1133 aaKnown RBP18.11■□□□□ 0.49
GGA3-216ENST00000583282 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
GGA3-216ENST00000583282 MYL6BP14649 208 aa18.1■□□□□ 0.49
GGA3-216ENST00000583282 HMGB2P26583 209 aaKnown RBP18.1■□□□□ 0.49
GGA3-216ENST00000583282 PDGFDQ9GZP0 370 aaPredicted RBP18.1■□□□□ 0.49
GGA3-216ENST00000583282 CHPF2Q9P2E5 772 aa18.1■□□□□ 0.49
GGA3-216ENST00000583282 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
GGA3-216ENST00000583282 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
GGA3-216ENST00000583282 SSFA2P28290 1259 aa18.09■□□□□ 0.49
GGA3-216ENST00000583282 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
GGA3-216ENST00000583282 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
GGA3-216ENST00000583282 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
GGA3-216ENST00000583282 COL23A1Q86Y22 540 aaPredicted RBP18.08■□□□□ 0.48
GGA3-216ENST00000583282 ARXQ96QS3 562 aa18.08■□□□□ 0.48
GGA3-216ENST00000583282 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
GGA3-216ENST00000583282 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
GGA3-216ENST00000583282 MSL1Q68DK7 614 aa18.06■□□□□ 0.48
GGA3-216ENST00000583282 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
GGA3-216ENST00000583282 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
GGA3-216ENST00000583282 ARFGEF2Q9Y6D5 1785 aa18.05■□□□□ 0.48
GGA3-216ENST00000583282 ADRA2BP18089 450 aa18.05■□□□□ 0.48
GGA3-216ENST00000583282 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
GGA3-216ENST00000583282 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
GGA3-216ENST00000583282 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
GGA3-216ENST00000583282 VAMP4O75379 141 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 ZBTB7AO95365 584 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 RFC4P35249 363 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 EIF5P55010 431 aaKnown RBP18.04■□□□□ 0.48
GGA3-216ENST00000583282 PDIA6Q15084 440 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 FLAD1Q8NFF5 587 aa18.04■□□□□ 0.48
GGA3-216ENST00000583282 USP42Q9H9J4 1324 aaKnown RBP18.03■□□□□ 0.48
GGA3-216ENST00000583282 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
GGA3-216ENST00000583282 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
GGA3-216ENST00000583282 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
GGA3-216ENST00000583282 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
GGA3-216ENST00000583282 ANKRD36CQ5JPF3 1778 aa18.03■□□□□ 0.48
GGA3-216ENST00000583282 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
GGA3-216ENST00000583282 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
GGA3-216ENST00000583282 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
GGA3-216ENST00000583282 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 A0A087WZG4 1122 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 TTLL7Q6ZT98 887 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
GGA3-216ENST00000583282 NUP98P52948 1817 aa18■□□□□ 0.47
GGA3-216ENST00000583282 ZPR1O75312 459 aa18■□□□□ 0.47
GGA3-216ENST00000583282 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
GGA3-216ENST00000583282 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
GGA3-216ENST00000583282 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
GGA3-216ENST00000583282 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
GGA3-216ENST00000583282 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
GGA3-216ENST00000583282 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 GYS1P13807 737 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms