RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 LAS1LQ9Y4W2 734 aaKnown RBP28.25■■■□□ 2.11
TSEN54-208ENST00000583173 COL5A3P25940 1745 aaPredicted RBP28.25■■■□□ 2.11
TSEN54-208ENST00000583173 MYH14Q7Z406 1995 aaKnown RBP28.24■■■□□ 2.11
TSEN54-208ENST00000583173 STARD3NLO95772 234 aa28.24■■■□□ 2.11
TSEN54-208ENST00000583173 CCDC87Q9NVE4 849 aa28.23■■■□□ 2.11
TSEN54-208ENST00000583173 GNPATO15228 680 aa28.22■■■□□ 2.11
TSEN54-208ENST00000583173 SSFA2P28290 1259 aa28.22■■■□□ 2.11
TSEN54-208ENST00000583173 FLAD1Q8NFF5 587 aa28.22■■■□□ 2.11
TSEN54-208ENST00000583173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.21■■■□□ 2.11
TSEN54-208ENST00000583173 A1BGP04217 495 aa28.2■■■□□ 2.1
TSEN54-208ENST00000583173 SPINK5Q9NQ38 1064 aaPredicted RBP28.2■■■□□ 2.1
TSEN54-208ENST00000583173 RTCBQ9Y3I0 505 aaKnown RBP28.2■■■□□ 2.1
TSEN54-208ENST00000583173 QSER1Q2KHR3 1735 aa28.19■■■□□ 2.1
TSEN54-208ENST00000583173 KRT24Q2M2I5 525 aa28.19■■■□□ 2.1
TSEN54-208ENST00000583173 ZBTB1Q9Y2K1 713 aa28.19■■■□□ 2.1
TSEN54-208ENST00000583173 SLC16A10Q8TF71 515 aa28.18■■■□□ 2.1
TSEN54-208ENST00000583173 ARHGEF1Q92888 912 aaKnown RBP28.18■■■□□ 2.1
TSEN54-208ENST00000583173 UBR3Q6ZT12 1888 aa28.18■■■□□ 2.1
TSEN54-208ENST00000583173 TUBGCP6Q96RT7 1819 aa28.18■■■□□ 2.1
TSEN54-208ENST00000583173 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
TSEN54-208ENST00000583173 CASZ1Q86V15 1759 aa28.17■■■□□ 2.1
TSEN54-208ENST00000583173 ADRA2BP18089 450 aa28.17■■■□□ 2.1
TSEN54-208ENST00000583173 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
TSEN54-208ENST00000583173 TRAPPC3LQ5T215 181 aa28.17■■■□□ 2.1
TSEN54-208ENST00000583173 NBPF26B4DH59 902 aa28.16■■■□□ 2.1
TSEN54-208ENST00000583173 NBPF10Q6P3W6 841 aaKnown RBP28.16■■■□□ 2.1
TSEN54-208ENST00000583173 NBPF15Q8N660 670 aa28.16■■■□□ 2.1
TSEN54-208ENST00000583173 PHF14O94880 888 aa28.14■■■□□ 2.1
TSEN54-208ENST00000583173 HOXB7P09629 217 aa28.13■■■□□ 2.09
TSEN54-208ENST00000583173 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
TSEN54-208ENST00000583173 IL6STP40189 918 aaPredicted RBP28.13■■■□□ 2.09
TSEN54-208ENST00000583173 C8orf58Q8NAV2 365 aa28.13■■■□□ 2.09
TSEN54-208ENST00000583173 TSR2Q969E8 191 aaKnown RBP28.13■■■□□ 2.09
TSEN54-208ENST00000583173 DUSP27Q5VZP5 1158 aa28.12■■■□□ 2.09
TSEN54-208ENST00000583173 MTFR1LQ9H019 292 aa28.12■■■□□ 2.09
TSEN54-208ENST00000583173 ZBTB7AO95365 584 aa28.11■■■□□ 2.09
TSEN54-208ENST00000583173 PDIA6Q15084 440 aa28.11■■■□□ 2.09
TSEN54-208ENST00000583173 SGIP1Q9BQI5 828 aa28.11■■■□□ 2.09
TSEN54-208ENST00000583173 PIP4K2AP48426 406 aaPredicted RBP28.09■■■□□ 2.09
TSEN54-208ENST00000583173 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
TSEN54-208ENST00000583173 MSH5O43196 834 aa28.08■■■□□ 2.09
TSEN54-208ENST00000583173 PTGER2P43116 358 aa28.08■■■□□ 2.09
TSEN54-208ENST00000583173 TSPYL6Q8N831 410 aa28.08■■■□□ 2.09
TSEN54-208ENST00000583173 ATF5Q9Y2D1 282 aaPredicted RBP28.08■■■□□ 2.09
TSEN54-208ENST00000583173 FANCIQ9NVI1 1328 aa28.08■■■□□ 2.09
TSEN54-208ENST00000583173 EIF2S2P20042 333 aaKnown RBP28.07■■■□□ 2.08
TSEN54-208ENST00000583173 RFC4P35249 363 aa28.07■■■□□ 2.08
TSEN54-208ENST00000583173 GOLGA2Q08379 1002 aa28.07■■■□□ 2.08
TSEN54-208ENST00000583173 TRMT2AQ8IZ69 625 aaKnown RBP28.07■■■□□ 2.08
TSEN54-208ENST00000583173 SPON1Q9HCB6 807 aa28.07■■■□□ 2.08
TSEN54-208ENST00000583173 ERBB4Q15303 1308 aa28.07■■■□□ 2.08
TSEN54-208ENST00000583173 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
TSEN54-208ENST00000583173 NARFQ9UHQ1 456 aa28.06■■■□□ 2.08
TSEN54-208ENST00000583173 COL15A1P39059 1388 aa28.06■■■□□ 2.08
TSEN54-208ENST00000583173 A0A087WZG4 1122 aa28.05■■■□□ 2.08
TSEN54-208ENST00000583173 GYS1P13807 737 aa28.05■■■□□ 2.08
TSEN54-208ENST00000583173 USP42Q9H9J4 1324 aaKnown RBP28.05■■■□□ 2.08
TSEN54-208ENST00000583173 SRP68Q9UHB9 627 aaKnown RBP28.05■■■□□ 2.08
TSEN54-208ENST00000583173 SRCAPQ6ZRS2 3230 aa28.05■■■□□ 2.08
TSEN54-208ENST00000583173 ELL2O00472 640 aaPredicted RBP28.04■■■□□ 2.08
TSEN54-208ENST00000583173 MYH16Q9H6N6 1097 aa28.04■■■□□ 2.08
TSEN54-208ENST00000583173 BCL2L12Q9HB09 334 aa28.04■■■□□ 2.08
TSEN54-208ENST00000583173 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
TSEN54-208ENST00000583173 E9PSI1 815 aa28.02■■■□□ 2.08
TSEN54-208ENST00000583173 PROSER3Q2NL68 480 aa28.02■■■□□ 2.08
TSEN54-208ENST00000583173 LAMB4A4D0S4 1761 aa28.01■■■□□ 2.08
TSEN54-208ENST00000583173 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
TSEN54-208ENST00000583173 VAMP4O75379 141 aa28.01■■■□□ 2.07
TSEN54-208ENST00000583173 EXOSC9Q06265 439 aaKnown RBP28.01■■■□□ 2.07
TSEN54-208ENST00000583173 HDGFL1Q5TGJ6 251 aa28.01■■■□□ 2.07
TSEN54-208ENST00000583173 NECTIN2Q92692 538 aa28.01■■■□□ 2.07
TSEN54-208ENST00000583173 DDX21Q9NR30 783 aaKnown RBP eCLIP28.01■■■□□ 2.07
TSEN54-208ENST00000583173 TBC1D2BQ9UPU7 963 aa28.01■■■□□ 2.07
TSEN54-208ENST00000583173 HNRNPUQ00839 825 aaKnown RBP eCLIP28■■■□□ 2.07
TSEN54-208ENST00000583173 USPL1Q5W0Q7 1092 aa28■■■□□ 2.07
TSEN54-208ENST00000583173 NLGN1Q8N2Q7 840 aa28■■■□□ 2.07
TSEN54-208ENST00000583173 ZPR1O75312 459 aa27.99■■■□□ 2.07
TSEN54-208ENST00000583173 CAMTA2O94983 1202 aa27.99■■■□□ 2.07
TSEN54-208ENST00000583173 FKBP8Q14318 412 aa27.99■■■□□ 2.07
TSEN54-208ENST00000583173 TWISTNBQ3B726 338 aaPredicted RBP27.99■■■□□ 2.07
TSEN54-208ENST00000583173 MSL1Q68DK7 614 aa27.99■■■□□ 2.07
TSEN54-208ENST00000583173 ANXA1P04083 346 aa27.98■■■□□ 2.07
TSEN54-208ENST00000583173 MYL6BP14649 208 aa27.98■■■□□ 2.07
TSEN54-208ENST00000583173 TM4SF1P30408 202 aa27.98■■■□□ 2.07
TSEN54-208ENST00000583173 DZIP3Q86Y13 1208 aaKnown RBP27.97■■■□□ 2.07
TSEN54-208ENST00000583173 CHPF2Q9P2E5 772 aa27.97■■■□□ 2.07
TSEN54-208ENST00000583173 C4AP0C0L4 1744 aa27.96■■■□□ 2.07
TSEN54-208ENST00000583173 RGL2O15211 777 aa27.96■■■□□ 2.07
TSEN54-208ENST00000583173 DBF4Q9UBU7 674 aaPredicted RBP27.96■■■□□ 2.07
TSEN54-208ENST00000583173 ZNF330Q9Y3S2 320 aaPredicted RBP27.96■■■□□ 2.07
TSEN54-208ENST00000583173 TTLL7Q6ZT98 887 aa27.95■■■□□ 2.06
TSEN54-208ENST00000583173 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
TSEN54-208ENST00000583173 CCDC30Q5VVM6 783 aa27.93■■■□□ 2.06
TSEN54-208ENST00000583173 CLEC4GQ6UXB4 293 aa27.93■■■□□ 2.06
TSEN54-208ENST00000583173 LRP5O75197 1615 aa27.92■■■□□ 2.06
TSEN54-208ENST00000583173 ERVV-1B6SEH8 477 aa27.92■■■□□ 2.06
TSEN54-208ENST00000583173 COPS6Q7L5N1 327 aa27.92■■■□□ 2.06
TSEN54-208ENST00000583173 NPM2Q86SE8 214 aaKnown RBP27.92■■■□□ 2.06
TSEN54-208ENST00000583173 MMP10P09238 476 aa27.91■■■□□ 2.06
TSEN54-208ENST00000583173 POLD1P28340 1107 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms