RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
SMARCE1-218ENST00000582955 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-218ENST00000582955 STARD3NLO95772 234 aa16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 ARHGEF1Q92888 912 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 MRS2Q9HD23 443 aa16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
SMARCE1-218ENST00000582955 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
SMARCE1-218ENST00000582955 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
SMARCE1-218ENST00000582955 FHDC1Q9C0D6 1143 aaPredicted RBP16.57■□□□□ 0.24
SMARCE1-218ENST00000582955 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
SMARCE1-218ENST00000582955 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
SMARCE1-218ENST00000582955 SOS1Q07889 1333 aaPredicted RBP16.55■□□□□ 0.24
SMARCE1-218ENST00000582955 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
SMARCE1-218ENST00000582955 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-218ENST00000582955 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
SMARCE1-218ENST00000582955 COL15A1P39059 1388 aa16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 APAF1O14727 1248 aa16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
SMARCE1-218ENST00000582955 USP42Q9H9J4 1324 aaKnown RBP16.52■□□□□ 0.24
SMARCE1-218ENST00000582955 GYS1P13807 737 aa16.52■□□□□ 0.24
SMARCE1-218ENST00000582955 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
SMARCE1-218ENST00000582955 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.24
SMARCE1-218ENST00000582955 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
SMARCE1-218ENST00000582955 ZPR1O75312 459 aa16.51■□□□□ 0.23
SMARCE1-218ENST00000582955 A1BGP04217 495 aa16.51■□□□□ 0.23
SMARCE1-218ENST00000582955 MMP10P09238 476 aa16.51■□□□□ 0.23
SMARCE1-218ENST00000582955 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-218ENST00000582955 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
SMARCE1-218ENST00000582955 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
SMARCE1-218ENST00000582955 IL6STP40189 918 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-218ENST00000582955 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-218ENST00000582955 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-218ENST00000582955 USPL1Q5W0Q7 1092 aa16.49■□□□□ 0.23
SMARCE1-218ENST00000582955 A0A087WZG4 1122 aa16.48■□□□□ 0.23
SMARCE1-218ENST00000582955 FKBP8Q14318 412 aa16.48■□□□□ 0.23
SMARCE1-218ENST00000582955 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
SMARCE1-218ENST00000582955 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
SMARCE1-218ENST00000582955 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SMARCE1-218ENST00000582955 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
SMARCE1-218ENST00000582955 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
SMARCE1-218ENST00000582955 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
SMARCE1-218ENST00000582955 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
SMARCE1-218ENST00000582955 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
SMARCE1-218ENST00000582955 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.23
SMARCE1-218ENST00000582955 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
SMARCE1-218ENST00000582955 CHL1O00533 1208 aa16.45■□□□□ 0.22
SMARCE1-218ENST00000582955 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
SMARCE1-218ENST00000582955 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-218ENST00000582955 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-218ENST00000582955 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
SMARCE1-218ENST00000582955 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
SMARCE1-218ENST00000582955 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
SMARCE1-218ENST00000582955 DDR1Q08345 913 aa16.43■□□□□ 0.22
SMARCE1-218ENST00000582955 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-218ENST00000582955 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
SMARCE1-218ENST00000582955 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
SMARCE1-218ENST00000582955 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SMARCE1-218ENST00000582955 NFIXQ14938 502 aa16.42■□□□□ 0.22
SMARCE1-218ENST00000582955 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
SMARCE1-218ENST00000582955 NGEFQ8N5V2 710 aa16.42■□□□□ 0.22
SMARCE1-218ENST00000582955 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
SMARCE1-218ENST00000582955 POLRMTO00411 1230 aaKnown RBP16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 MYL6BP14649 208 aa16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 TM4SF1P30408 202 aa16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 GPR162Q16538 588 aa16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
SMARCE1-218ENST00000582955 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 GNAI1P63096 354 aa16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-218ENST00000582955 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
SMARCE1-218ENST00000582955 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
SMARCE1-218ENST00000582955 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
SMARCE1-218ENST00000582955 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
SMARCE1-218ENST00000582955 SERPINB2P05120 415 aa16.37■□□□□ 0.21
SMARCE1-218ENST00000582955 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
SMARCE1-218ENST00000582955 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
SMARCE1-218ENST00000582955 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
SMARCE1-218ENST00000582955 TGFB2P61812 414 aa16.36■□□□□ 0.21
SMARCE1-218ENST00000582955 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
SMARCE1-218ENST00000582955 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
SMARCE1-218ENST00000582955 CARMIL3Q8ND23 1372 aa16.36■□□□□ 0.21
SMARCE1-218ENST00000582955 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 NPHP1O15259 732 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 ANXA1P04083 346 aa16.35■□□□□ 0.21
SMARCE1-218ENST00000582955 HOXB7P09629 217 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms