RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 BRCA1P38398 1863 aaKnown RBP8.81□□□□□ -1
TVP23B-210ENST00000582288 NCAPD2Q15021 1401 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 PKD1L3Q7Z443 1732 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 ARFGEF1Q9Y6D6 1849 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 A0A0G2JLW4 131 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 GNPATO15228 680 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 FCHSD2O94868 740 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 TMF1P82094 1093 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 C9orf131Q5VYM1 1079 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 DCAF5Q96JK2 942 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
TVP23B-210ENST00000582288 N4BP2Q86UW6 1770 aaPredicted RBP8.79□□□□□ -1
TVP23B-210ENST00000582288 FLT4P35916 1363 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 SLC34A2O95436 690 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 DPEP1P16444 411 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 KCNA3P22001 575 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 HTRA3P83110 453 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
TVP23B-210ENST00000582288 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 PIM2Q9P1W9 311 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 SPG7Q9UQ90 795 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 RTCBQ9Y3I0 505 aaKnown RBP8.79□□□□□ -1
TVP23B-210ENST00000582288 C4AP0C0L4 1744 aa8.79□□□□□ -1
TVP23B-210ENST00000582288 ATP6V1AP38606 617 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 ITPK1Q13572 414 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 CARD11Q9BXL7 1154 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 TMOD3Q9NYL9 352 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 KCPQ6ZWJ8 1503 aa8.78□□□□□ -1
TVP23B-210ENST00000582288 TONSLQ96HA7 1378 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 FYB1O15117 783 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
TVP23B-210ENST00000582288 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
TVP23B-210ENST00000582288 FBLN1P23142 703 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 RRS1Q15050 365 aaKnown RBP8.77□□□□□ -1.01
TVP23B-210ENST00000582288 HSP90AB2PQ58FF8 381 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 DALRD3Q5D0E6 543 aaKnown RBP8.77□□□□□ -1.01
TVP23B-210ENST00000582288 SMIM5Q71RC9 77 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 RRAGCQ9HB90 399 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 PARP3Q9Y6F1 533 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
TVP23B-210ENST00000582288 KDRP35968 1356 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 GYS1P13807 737 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 VEGFAP15692 232 aaPredicted RBP8.76□□□□□ -1.01
TVP23B-210ENST00000582288 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 ATG3Q9NT62 314 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 RNF181Q9P0P0 153 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 ASAP1Q9ULH1 1129 aa8.76□□□□□ -1.01
TVP23B-210ENST00000582288 KDM6AO15550 1401 aaPredicted RBP8.76□□□□□ -1.01
TVP23B-210ENST00000582288 RPS6KA4O75676 772 aa8.75□□□□□ -1.01
TVP23B-210ENST00000582288 RFC4P35249 363 aa8.75□□□□□ -1.01
TVP23B-210ENST00000582288 IRX5P78411 483 aaPredicted RBP8.75□□□□□ -1.01
TVP23B-210ENST00000582288 IFNL2Q8IZJ0 200 aa8.75□□□□□ -1.01
TVP23B-210ENST00000582288 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
TVP23B-210ENST00000582288 TESK2Q96S53 571 aa8.75□□□□□ -1.01
TVP23B-210ENST00000582288 TMEM106CQ9BVX2 250 aa8.75□□□□□ -1.01
TVP23B-210ENST00000582288 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 GLTPD2A6NH11 291 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 ERVV-2B6SEH9 535 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 PHKG2P15735 406 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 RASEFQ8IZ41 740 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 SIN3AQ96ST3 1273 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
TVP23B-210ENST00000582288 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
TVP23B-210ENST00000582288 SBF1O95248 1867 aa8.73□□□□□ -1.01
TVP23B-210ENST00000582288 LMNB1P20700 586 aa8.73□□□□□ -1.01
TVP23B-210ENST00000582288 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
TVP23B-210ENST00000582288 SLC4A9Q96Q91 983 aa8.72□□□□□ -1.01
TVP23B-210ENST00000582288 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
TVP23B-210ENST00000582288 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.01
TVP23B-210ENST00000582288 HSP90AB1P08238 724 aaKnown RBP8.71□□□□□ -1.02
TVP23B-210ENST00000582288 TM4SF1P30408 202 aa8.71□□□□□ -1.02
TVP23B-210ENST00000582288 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
TVP23B-210ENST00000582288 USP42Q9H9J4 1324 aaKnown RBP8.71□□□□□ -1.02
TVP23B-210ENST00000582288 RNF166Q96A37 237 aaPredicted RBP8.7□□□□□ -1.02
TVP23B-210ENST00000582288 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
TVP23B-210ENST00000582288 ST20-MTHFSA0A0A6YYL1 179 aa8.69□□□□□ -1.02
TVP23B-210ENST00000582288 POLRMTO00411 1230 aaKnown RBP8.69□□□□□ -1.02
TVP23B-210ENST00000582288 DDR1Q08345 913 aa8.69□□□□□ -1.02
TVP23B-210ENST00000582288 FKBP8Q14318 412 aa8.69□□□□□ -1.02
TVP23B-210ENST00000582288 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
TVP23B-210ENST00000582288 EYA1Q99502 592 aa8.69□□□□□ -1.02
TVP23B-210ENST00000582288 POTECB2RU33 542 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 CHRNA5P30532 468 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 CTCFP49711 727 aaPredicted RBP8.68□□□□□ -1.02
TVP23B-210ENST00000582288 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 PDZRN3Q9UPQ7 1066 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 DLEC1Q9Y238 1755 aa8.68□□□□□ -1.02
TVP23B-210ENST00000582288 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 CRKLP46109 303 aaKnown RBP8.67□□□□□ -1.02
TVP23B-210ENST00000582288 CNTNAP1P78357 1384 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 TIAM2Q8IVF5 1701 aa8.67□□□□□ -1.02
TVP23B-210ENST00000582288 TTLL6Q8N841 843 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms