RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 HOXB7P09629 217 aa26■■□□□ 1.75
TOP3A-213ENST00000582230 FLAD1Q8NFF5 587 aa26■■□□□ 1.75
TOP3A-213ENST00000582230 TSR2Q969E8 191 aaKnown RBP26■■□□□ 1.75
TOP3A-213ENST00000582230 RTCBQ9Y3I0 505 aaKnown RBP26■■□□□ 1.75
TOP3A-213ENST00000582230 RPS6KA4O75676 772 aa25.99■■□□□ 1.75
TOP3A-213ENST00000582230 COL5A3P25940 1745 aaPredicted RBP25.98■■□□□ 1.75
TOP3A-213ENST00000582230 E9PSI1 815 aa25.98■■□□□ 1.75
TOP3A-213ENST00000582230 SSFA2P28290 1259 aa25.98■■□□□ 1.75
TOP3A-213ENST00000582230 SPINK5Q9NQ38 1064 aaPredicted RBP25.98■■□□□ 1.75
TOP3A-213ENST00000582230 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
TOP3A-213ENST00000582230 DUSP27Q5VZP5 1158 aa25.97■■□□□ 1.75
TOP3A-213ENST00000582230 SOS1Q07889 1333 aaPredicted RBP25.96■■□□□ 1.75
TOP3A-213ENST00000582230 PSDA5PKW4 1024 aaPredicted RBP25.96■■□□□ 1.75
TOP3A-213ENST00000582230 ADRA2BP18089 450 aa25.96■■□□□ 1.75
TOP3A-213ENST00000582230 KRT24Q2M2I5 525 aa25.96■■□□□ 1.75
TOP3A-213ENST00000582230 PNPLA7Q6ZV29 1317 aa25.95■■□□□ 1.75
TOP3A-213ENST00000582230 A1BGP04217 495 aa25.95■■□□□ 1.74
TOP3A-213ENST00000582230 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
TOP3A-213ENST00000582230 ZBTB1Q9Y2K1 713 aa25.95■■□□□ 1.74
TOP3A-213ENST00000582230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.94■■□□□ 1.74
TOP3A-213ENST00000582230 CANXP27824 592 aaKnown RBP25.94■■□□□ 1.74
TOP3A-213ENST00000582230 SLFN5Q08AF3 891 aa25.94■■□□□ 1.74
TOP3A-213ENST00000582230 TRAPPC3LQ5T215 181 aa25.94■■□□□ 1.74
TOP3A-213ENST00000582230 C8orf58Q8NAV2 365 aa25.94■■□□□ 1.74
TOP3A-213ENST00000582230 ERBB4Q15303 1308 aa25.93■■□□□ 1.74
TOP3A-213ENST00000582230 ZBED9Q6R2W3 1325 aa25.92■■□□□ 1.74
TOP3A-213ENST00000582230 PHF14O94880 888 aa25.92■■□□□ 1.74
TOP3A-213ENST00000582230 EIF2S2P20042 333 aaKnown RBP25.92■■□□□ 1.74
TOP3A-213ENST00000582230 IL6STP40189 918 aaPredicted RBP25.92■■□□□ 1.74
TOP3A-213ENST00000582230 AMIGO3Q86WK7 504 aa25.92■■□□□ 1.74
TOP3A-213ENST00000582230 NPM2Q86SE8 214 aaKnown RBP25.91■■□□□ 1.74
TOP3A-213ENST00000582230 COL23A1Q86Y22 540 aaPredicted RBP25.91■■□□□ 1.74
TOP3A-213ENST00000582230 ELL2O00472 640 aaPredicted RBP25.9■■□□□ 1.74
TOP3A-213ENST00000582230 EIF5P55010 431 aaKnown RBP25.9■■□□□ 1.74
TOP3A-213ENST00000582230 HDGFL1Q5TGJ6 251 aa25.9■■□□□ 1.74
TOP3A-213ENST00000582230 SLC16A10Q8TF71 515 aa25.9■■□□□ 1.74
TOP3A-213ENST00000582230 ARHGEF1Q92888 912 aaKnown RBP25.9■■□□□ 1.74
TOP3A-213ENST00000582230 CDCA7LQ96GN5 454 aa25.9■■□□□ 1.74
TOP3A-213ENST00000582230 A0A087WZG4 1122 aa25.89■■□□□ 1.74
TOP3A-213ENST00000582230 MSH5O43196 834 aa25.89■■□□□ 1.74
TOP3A-213ENST00000582230 EXOSC9Q06265 439 aaKnown RBP25.89■■□□□ 1.74
TOP3A-213ENST00000582230 TWISTNBQ3B726 338 aaPredicted RBP25.89■■□□□ 1.74
TOP3A-213ENST00000582230 TRMT2AQ8IZ69 625 aaKnown RBP25.89■■□□□ 1.74
TOP3A-213ENST00000582230 TSPYL6Q8N831 410 aa25.89■■□□□ 1.74
TOP3A-213ENST00000582230 LAMB4A4D0S4 1761 aa25.89■■□□□ 1.73
TOP3A-213ENST00000582230 QSER1Q2KHR3 1735 aa25.88■■□□□ 1.73
TOP3A-213ENST00000582230 NBPF26B4DH59 902 aa25.88■■□□□ 1.73
TOP3A-213ENST00000582230 RFC4P35249 363 aa25.88■■□□□ 1.73
TOP3A-213ENST00000582230 NBPF10Q6P3W6 841 aaKnown RBP25.88■■□□□ 1.73
TOP3A-213ENST00000582230 SMIM5Q71RC9 77 aa25.88■■□□□ 1.73
TOP3A-213ENST00000582230 NBPF15Q8N660 670 aa25.88■■□□□ 1.73
TOP3A-213ENST00000582230 MYH14Q7Z406 1995 aaKnown RBP25.87■■□□□ 1.73
TOP3A-213ENST00000582230 UBR3Q6ZT12 1888 aa25.87■■□□□ 1.73
TOP3A-213ENST00000582230 COL15A1P39059 1388 aa25.87■■□□□ 1.73
TOP3A-213ENST00000582230 PDGFDQ9GZP0 370 aaPredicted RBP25.87■■□□□ 1.73
TOP3A-213ENST00000582230 PIP4K2AP48426 406 aaPredicted RBP25.86■■□□□ 1.73
TOP3A-213ENST00000582230 NECTIN2Q92692 538 aa25.86■■□□□ 1.73
TOP3A-213ENST00000582230 PDIA6Q15084 440 aa25.85■■□□□ 1.73
TOP3A-213ENST00000582230 CCDC30Q5VVM6 783 aa25.85■■□□□ 1.73
TOP3A-213ENST00000582230 DDX21Q9NR30 783 aaKnown RBP eCLIP25.85■■□□□ 1.73
TOP3A-213ENST00000582230 DBF4Q9UBU7 674 aaPredicted RBP25.85■■□□□ 1.73
TOP3A-213ENST00000582230 ZNF330Q9Y3S2 320 aaPredicted RBP25.85■■□□□ 1.73
TOP3A-213ENST00000582230 VAMP4O75379 141 aa25.83■■□□□ 1.73
TOP3A-213ENST00000582230 MYL6BP14649 208 aa25.83■■□□□ 1.73
TOP3A-213ENST00000582230 MTFR1LQ9H019 292 aa25.83■■□□□ 1.73
TOP3A-213ENST00000582230 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.73
TOP3A-213ENST00000582230 ZPR1O75312 459 aa25.82■■□□□ 1.72
TOP3A-213ENST00000582230 CHPF2Q9P2E5 772 aa25.82■■□□□ 1.72
TOP3A-213ENST00000582230 NARFQ9UHQ1 456 aa25.82■■□□□ 1.72
TOP3A-213ENST00000582230 CASZ1Q86V15 1759 aa25.81■■□□□ 1.72
TOP3A-213ENST00000582230 USP42Q9H9J4 1324 aaKnown RBP25.81■■□□□ 1.72
TOP3A-213ENST00000582230 ZBTB7AO95365 584 aa25.8■■□□□ 1.72
TOP3A-213ENST00000582230 DZIP3Q86Y13 1208 aaKnown RBP25.8■■□□□ 1.72
TOP3A-213ENST00000582230 ARXQ96QS3 562 aa25.8■■□□□ 1.72
TOP3A-213ENST00000582230 HYPKQ9NX55 129 aa25.8■■□□□ 1.72
TOP3A-213ENST00000582230 PROSER3Q2NL68 480 aa25.79■■□□□ 1.72
TOP3A-213ENST00000582230 LRP10Q7Z4F1 713 aa25.79■■□□□ 1.72
TOP3A-213ENST00000582230 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
TOP3A-213ENST00000582230 TBC1D2BQ9UPU7 963 aa25.79■■□□□ 1.72
TOP3A-213ENST00000582230 CT47B1P0C2W7 299 aaPredicted RBP25.78■■□□□ 1.72
TOP3A-213ENST00000582230 NLGN1Q8N2Q7 840 aa25.78■■□□□ 1.72
TOP3A-213ENST00000582230 SPON1Q9HCB6 807 aa25.78■■□□□ 1.72
TOP3A-213ENST00000582230 SRP68Q9UHB9 627 aaKnown RBP25.78■■□□□ 1.72
TOP3A-213ENST00000582230 ANXA1P04083 346 aa25.77■■□□□ 1.72
TOP3A-213ENST00000582230 GYS1P13807 737 aa25.77■■□□□ 1.72
TOP3A-213ENST00000582230 ZNF428Q96B54 188 aa25.77■■□□□ 1.72
TOP3A-213ENST00000582230 RGL2O15211 777 aa25.76■■□□□ 1.71
TOP3A-213ENST00000582230 USPL1Q5W0Q7 1092 aa25.76■■□□□ 1.71
TOP3A-213ENST00000582230 KIF6Q6ZMV9 814 aa25.76■■□□□ 1.71
TOP3A-213ENST00000582230 CAMTA2O94983 1202 aa25.75■■□□□ 1.71
TOP3A-213ENST00000582230 ATF5Q9Y2D1 282 aaPredicted RBP25.75■■□□□ 1.71
TOP3A-213ENST00000582230 ERVV-1B6SEH8 477 aa25.74■■□□□ 1.71
TOP3A-213ENST00000582230 COPS6Q7L5N1 327 aa25.74■■□□□ 1.71
TOP3A-213ENST00000582230 XAGE3Q8WTP9 111 aa25.74■■□□□ 1.71
TOP3A-213ENST00000582230 MSL1Q68DK7 614 aa25.73■■□□□ 1.71
TOP3A-213ENST00000582230 CLEC4GQ6UXB4 293 aa25.73■■□□□ 1.71
TOP3A-213ENST00000582230 TTLL7Q6ZT98 887 aa25.73■■□□□ 1.71
TOP3A-213ENST00000582230 ZNF652Q9Y2D9 606 aa25.73■■□□□ 1.71
TOP3A-213ENST00000582230 C4AP0C0L4 1744 aa25.73■■□□□ 1.71
TOP3A-213ENST00000582230 MAP3K15Q6ZN16 1313 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms