RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 BCL2L12Q9HB09 334 aa19.94■□□□□ 0.78
ATPAF2-211ENST00000581698 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
ATPAF2-211ENST00000581698 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
ATPAF2-211ENST00000581698 COL15A1P39059 1388 aa19.93■□□□□ 0.78
ATPAF2-211ENST00000581698 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 POLD1P28340 1107 aa19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 EIF5P55010 431 aaKnown RBP19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 TTC5Q8N0Z6 440 aa19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 FMNL2Q96PY5 1086 aa19.92■□□□□ 0.78
ATPAF2-211ENST00000581698 BCORQ6W2J9 1755 aa19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 A1BGP04217 495 aa19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 DDR1Q08345 913 aa19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 FKBP8Q14318 412 aa19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
ATPAF2-211ENST00000581698 NRXN2Q9P2S2 1712 aa19.9■□□□□ 0.78
ATPAF2-211ENST00000581698 MMP10P09238 476 aa19.9■□□□□ 0.78
ATPAF2-211ENST00000581698 RIPK4P57078 832 aa19.9■□□□□ 0.78
ATPAF2-211ENST00000581698 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
ATPAF2-211ENST00000581698 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
ATPAF2-211ENST00000581698 NBPF26B4DH59 902 aa19.89■□□□□ 0.77
ATPAF2-211ENST00000581698 PIP4K2AP48426 406 aaPredicted RBP19.89■□□□□ 0.77
ATPAF2-211ENST00000581698 AFDNP55196 1824 aaKnown RBP19.89■□□□□ 0.77
ATPAF2-211ENST00000581698 NBPF10Q6P3W6 841 aaKnown RBP19.89■□□□□ 0.77
ATPAF2-211ENST00000581698 NBPF15Q8N660 670 aa19.89■□□□□ 0.77
ATPAF2-211ENST00000581698 CANXP27824 592 aaKnown RBP19.88■□□□□ 0.77
ATPAF2-211ENST00000581698 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
ATPAF2-211ENST00000581698 RFC4P35249 363 aa19.87■□□□□ 0.77
ATPAF2-211ENST00000581698 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
ATPAF2-211ENST00000581698 USPL1Q5W0Q7 1092 aa19.87■□□□□ 0.77
ATPAF2-211ENST00000581698 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
ATPAF2-211ENST00000581698 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 N4BP2Q86UW6 1770 aaPredicted RBP19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 TM4SF1P30408 202 aa19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 NARFQ9UHQ1 456 aa19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 BRCA1P38398 1863 aaKnown RBP19.86■□□□□ 0.77
ATPAF2-211ENST00000581698 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
ATPAF2-211ENST00000581698 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 SNRPA1P09661 255 aaKnown RBP19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 YBX3P16989 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 NEUROD2Q15784 382 aa19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
ATPAF2-211ENST00000581698 POLRMTO00411 1230 aaKnown RBP19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 APAF1O14727 1248 aa19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 STARD3NLO95772 234 aa19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 IL6STP40189 918 aaPredicted RBP19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 KRT24Q2M2I5 525 aa19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 TEX13AQ9BXU3 409 aaPredicted RBP19.83■□□□□ 0.77
ATPAF2-211ENST00000581698 NEFMP07197 916 aa19.82■□□□□ 0.76
ATPAF2-211ENST00000581698 NFIXQ14938 502 aa19.82■□□□□ 0.76
ATPAF2-211ENST00000581698 LRP10Q7Z4F1 713 aa19.82■□□□□ 0.76
ATPAF2-211ENST00000581698 ANKRD31Q8N7Z5 1873 aa19.82■□□□□ 0.76
ATPAF2-211ENST00000581698 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
ATPAF2-211ENST00000581698 CHL1O00533 1208 aa19.81■□□□□ 0.76
ATPAF2-211ENST00000581698 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
ATPAF2-211ENST00000581698 TBC1D2BQ9UPU7 963 aa19.81■□□□□ 0.76
ATPAF2-211ENST00000581698 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
ATPAF2-211ENST00000581698 ZNF853P0CG23 659 aa19.79■□□□□ 0.76
ATPAF2-211ENST00000581698 ANP32CO43423 234 aa19.78■□□□□ 0.76
ATPAF2-211ENST00000581698 KCNA3P22001 575 aa19.78■□□□□ 0.76
ATPAF2-211ENST00000581698 PDIA6Q15084 440 aa19.78■□□□□ 0.76
ATPAF2-211ENST00000581698 MRS2Q9HD23 443 aa19.78■□□□□ 0.76
ATPAF2-211ENST00000581698 TSPYL4Q9UJ04 414 aa19.78■□□□□ 0.76
ATPAF2-211ENST00000581698 LMOD3Q0VAK6 560 aa19.77■□□□□ 0.76
ATPAF2-211ENST00000581698 TBC1D9BQ66K14 1250 aa19.77■□□□□ 0.76
ATPAF2-211ENST00000581698 COL11A2P13942 1736 aaPredicted RBP19.76■□□□□ 0.75
ATPAF2-211ENST00000581698 DLEC1Q9Y238 1755 aa19.76■□□□□ 0.75
ATPAF2-211ENST00000581698 ZPR1O75312 459 aa19.76■□□□□ 0.75
ATPAF2-211ENST00000581698 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
ATPAF2-211ENST00000581698 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
ATPAF2-211ENST00000581698 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
ATPAF2-211ENST00000581698 DZIP3Q86Y13 1208 aaKnown RBP19.74■□□□□ 0.75
ATPAF2-211ENST00000581698 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
ATPAF2-211ENST00000581698 CHD4Q14839 1912 aa19.74■□□□□ 0.75
ATPAF2-211ENST00000581698 NUP98P52948 1817 aa19.74■□□□□ 0.75
ATPAF2-211ENST00000581698 A0A087WZG4 1122 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 DPEP1P16444 411 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 PARP3Q9Y6F1 533 aa19.73■□□□□ 0.75
ATPAF2-211ENST00000581698 ANXA1P04083 346 aa19.72■□□□□ 0.75
ATPAF2-211ENST00000581698 HLFQ16534 295 aa19.72■□□□□ 0.75
ATPAF2-211ENST00000581698 SERPINB2P05120 415 aa19.71■□□□□ 0.75
ATPAF2-211ENST00000581698 BICDL1Q6ZP65 573 aa19.71■□□□□ 0.75
ATPAF2-211ENST00000581698 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
ATPAF2-211ENST00000581698 ARFGEF1Q9Y6D6 1849 aa19.7■□□□□ 0.74
ATPAF2-211ENST00000581698 CHRNA5P30532 468 aa19.7■□□□□ 0.74
ATPAF2-211ENST00000581698 TNRC6CQ9HCJ0 1690 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-211ENST00000581698 GPR162Q16538 588 aa19.69■□□□□ 0.74
ATPAF2-211ENST00000581698 CCDC24Q8N4L8 307 aa19.69■□□□□ 0.74
ATPAF2-211ENST00000581698 TGFB2P61812 414 aa19.68■□□□□ 0.74
ATPAF2-211ENST00000581698 PRR5LQ6MZQ0 368 aa19.68■□□□□ 0.74
ATPAF2-211ENST00000581698 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
ATPAF2-211ENST00000581698 MYL6BP14649 208 aa19.67■□□□□ 0.74
ATPAF2-211ENST00000581698 CCDC27Q2M243 656 aa19.67■□□□□ 0.74
ATPAF2-211ENST00000581698 WWC1Q8IX03 1113 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms