RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 VSIG10Q8N0Z9 540 aa17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 SYT17Q9BSW7 474 aa17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
CUEDC1-209ENST00000581391 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
CUEDC1-209ENST00000581391 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
CUEDC1-209ENST00000581391 APAF1O14727 1248 aa17.95■□□□□ 0.46
CUEDC1-209ENST00000581391 RFC4P35249 363 aa17.95■□□□□ 0.46
CUEDC1-209ENST00000581391 GYS1P13807 737 aa17.94■□□□□ 0.46
CUEDC1-209ENST00000581391 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
CUEDC1-209ENST00000581391 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
CUEDC1-209ENST00000581391 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
CUEDC1-209ENST00000581391 NLGN2Q8NFZ4 835 aa17.93■□□□□ 0.46
CUEDC1-209ENST00000581391 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
CUEDC1-209ENST00000581391 STARD3NLO95772 234 aa17.92■□□□□ 0.46
CUEDC1-209ENST00000581391 ADRA2BP18089 450 aa17.92■□□□□ 0.46
CUEDC1-209ENST00000581391 FKBP8Q14318 412 aa17.92■□□□□ 0.46
CUEDC1-209ENST00000581391 ZNF330Q9Y3S2 320 aaPredicted RBP17.92■□□□□ 0.46
CUEDC1-209ENST00000581391 MMP10P09238 476 aa17.91■□□□□ 0.46
CUEDC1-209ENST00000581391 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
CUEDC1-209ENST00000581391 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
CUEDC1-209ENST00000581391 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
CUEDC1-209ENST00000581391 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
CUEDC1-209ENST00000581391 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
CUEDC1-209ENST00000581391 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
CUEDC1-209ENST00000581391 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
CUEDC1-209ENST00000581391 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
CUEDC1-209ENST00000581391 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
CUEDC1-209ENST00000581391 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
CUEDC1-209ENST00000581391 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.45
CUEDC1-209ENST00000581391 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 NLGN1Q8N2Q7 840 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 COL15A1P39059 1388 aa17.88■□□□□ 0.45
CUEDC1-209ENST00000581391 ZPR1O75312 459 aa17.87■□□□□ 0.45
CUEDC1-209ENST00000581391 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
CUEDC1-209ENST00000581391 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
CUEDC1-209ENST00000581391 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
CUEDC1-209ENST00000581391 DDR1Q08345 913 aa17.86■□□□□ 0.45
CUEDC1-209ENST00000581391 LMOD3Q0VAK6 560 aa17.86■□□□□ 0.45
CUEDC1-209ENST00000581391 UTRNP46939 3433 aa17.86■□□□□ 0.45
CUEDC1-209ENST00000581391 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
CUEDC1-209ENST00000581391 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
CUEDC1-209ENST00000581391 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
CUEDC1-209ENST00000581391 CHL1O00533 1208 aa17.84■□□□□ 0.45
CUEDC1-209ENST00000581391 TM4SF1P30408 202 aa17.84■□□□□ 0.45
CUEDC1-209ENST00000581391 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
CUEDC1-209ENST00000581391 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
CUEDC1-209ENST00000581391 NFIXQ14938 502 aa17.83■□□□□ 0.44
CUEDC1-209ENST00000581391 BICDL1Q6ZP65 573 aa17.83■□□□□ 0.44
CUEDC1-209ENST00000581391 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
CUEDC1-209ENST00000581391 NECTIN2Q92692 538 aa17.83■□□□□ 0.44
CUEDC1-209ENST00000581391 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
CUEDC1-209ENST00000581391 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
CUEDC1-209ENST00000581391 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
CUEDC1-209ENST00000581391 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CUEDC1-209ENST00000581391 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
CUEDC1-209ENST00000581391 ANXA1P04083 346 aa17.81■□□□□ 0.44
CUEDC1-209ENST00000581391 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
CUEDC1-209ENST00000581391 A0A087WZG4 1122 aa17.8■□□□□ 0.44
CUEDC1-209ENST00000581391 MYL6BP14649 208 aa17.8■□□□□ 0.44
CUEDC1-209ENST00000581391 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
CUEDC1-209ENST00000581391 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
CUEDC1-209ENST00000581391 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 GPR162Q16538 588 aa17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 PROSER3Q2NL68 480 aa17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
CUEDC1-209ENST00000581391 A0A0G2JLW4 131 aa17.78■□□□□ 0.44
CUEDC1-209ENST00000581391 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
CUEDC1-209ENST00000581391 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
CUEDC1-209ENST00000581391 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.44
CUEDC1-209ENST00000581391 PDIA6Q15084 440 aa17.77■□□□□ 0.44
CUEDC1-209ENST00000581391 HLFQ16534 295 aa17.77■□□□□ 0.44
CUEDC1-209ENST00000581391 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
CUEDC1-209ENST00000581391 SERPINB2P05120 415 aa17.76■□□□□ 0.43
CUEDC1-209ENST00000581391 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
CUEDC1-209ENST00000581391 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
CUEDC1-209ENST00000581391 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CUEDC1-209ENST00000581391 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
CUEDC1-209ENST00000581391 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
CUEDC1-209ENST00000581391 DPEP1P16444 411 aa17.75■□□□□ 0.43
CUEDC1-209ENST00000581391 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
CUEDC1-209ENST00000581391 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
CUEDC1-209ENST00000581391 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
CUEDC1-209ENST00000581391 CHRNA5P30532 468 aa17.74■□□□□ 0.43
CUEDC1-209ENST00000581391 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
CUEDC1-209ENST00000581391 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
CUEDC1-209ENST00000581391 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
CUEDC1-209ENST00000581391 KCNA3P22001 575 aa17.73■□□□□ 0.43
CUEDC1-209ENST00000581391 GNAI1P63096 354 aa17.73■□□□□ 0.43
CUEDC1-209ENST00000581391 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 PXDNLA1KZ92 1463 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 CARMIL3Q8ND23 1372 aa17.72■□□□□ 0.43
CUEDC1-209ENST00000581391 FAM177BA6PVY3 158 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms